Information report for Aan020124
Gene Details
Functional Annotation
- GO:0003677 — Molecular Function — DNA binding
- GO:0005509 — Molecular Function — calcium ion binding
- GO:0005544 — Molecular Function — calcium-dependent phospholipid binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn020361
- Citrullus lanatus: Cla020285
- Cucumis melo: MELO3C020812P1
- Cucumis sativus: Cucsa.234310.1
- Fragaria vesca: mrna07646.1-v1.0-hybrid
- Gossypium arboreum: Cotton_A_15267_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A12G0349, GhMYB4, Gh_D12G0316
- Lactuca sativa: Lsa012737, Lsa009134
- Malus domestica: MDP0000950559, MdMYB308L, MDP0000249611
- Prunus mume: XP_008236005.1
- Prunus persica: Prupe.8G164300.1.p
- Pyrus bretschneideri: Pbr020733.1, Pbr020726.1
- Sesamum indicum: XP_011088595.1, XP_011092988.1
Sequences
CDS Sequence:
- >Aan020124|Artemisia_annua|MYB|gnl|UG|Aan#S54982389;PUT-183a-Artemisia_annua-20160997;PUT-183a-Artemisia_annua-529160989;PUT-183a-Artemisia_annua-77424
ATGTCAACATTAACAGTTCCACCTGTGTTGTCATCACCACGCGATGACGCCATGCATTTATACAAAGCTTTCAAAGGACTTGGTTGTGACACTGCAGCAGTTGTCAATATACTTGCTCATCGTGACGCATCACAGCGTGCTCTGATTGAGAATGAGTACCGAACTATGTACCATGAAGAGTTGACTAAACGACTCTCTTCAGAGCTCAGTGGAAATGTCAAGAAAGCGGTTCTACTTTGGATGCCTGATCCAGCACGAAGGGATGCAATGATATTGCATGATGCTTTAACTACTGATATTGATTTGAAAGAAGCTACTGAAGTCATATGTTCTCGGACTCCGTCACAGATACAGTATCTTAAGCAGCTTTACCATCAACTTTATGGTACTTACATTGAGCATGCCATTCAAGCCCAAGCTTCTGGTGACCTTGAACAGTTGCTTCTGGCATATTTGAGTACCCCTCGCAGTGAAGGGTTGGAAGTTGATAGAACAATGGCGGATCACGATGCTAAAGCTCTGTTTAAAGCTGGTGAAAAGAGGCTTGGAACCGATGAGAAGACATTCAGAGTCATATTCAGTGGAAGAAGTAGGGCACACATGGCTGCCGTCAGTTCTGCATATCATAATATGTATGGGAGCTCACTGAAGAAGGCTGTAAAAGGTGAAACATCGGGAAACTTTGAGCATGCTCTTGTTACCATCTTACAATGTGCTGAGAATCCTGGGAAGTACTTTGCCAAGGTAATGCACAGAGCAATGAAGGGACTGGGAACCAATGATAAAACGCTCACAAGAGTGATCGTCACAAGGACAGAGATCGACATGCAGTATATCAAGGCAGAGTATTATAAGAAGCATCATAAGAGTCTAAACGATGCTGTACACTCTGAGACATCTGGTCATTACCGNCACCTTCCTTCTTTCACTCTTGGGCCCAAATCAGCATTAGGAAGTCGTTTCTGGAGGCTGGCATATTGCAAAGACAGTGGCAGTATATTCAGCGTGTGTGTGCCTGAANTAGGTTGTAGTTTGNTAGTCTTCCAACTTGACTTTGGTTATGGTGAGATGCTTGTTAAGAAGTCTAGTATGTTAAAAAGTGTTCTATGTTCAGTTGTTATGGTAACTTTTCTAGAGATGTGGAAATTCACATCCAAAAAGATGAACCTTCCGTTATTTGTCTTTCTGTTTCTCTCTCCTCAAAAACACACAAAAATTGGGAAGTTTAAAGAAGAAAGTCTAAATATGGGAAGGTCACCTTGTTGTGAAAAAGCACACACAAACAAAGGTGCATGGACCAAAGAAGAAGATGATCGGTTGATAGCTTATATAAGAACTCATGGTGAAGGCTGCTGGAGGTCCCTACCTAAAGCTGCTGGCCTTCTAAGGTGTGGTAAAAGCTGTCGTCTTCGGTGGATCAATTATCTTCGTCCTGATCTTAAACGTGGCAATTTTACTGAAGATGAAGATGAACTTATTATCAAACTTCATAGCCTCCTTGGCAACAAGTGGTCTTTAATAGCTGGAAGATTGCCAGGAAGAACAGATAACGAGATAAAAAACTACTGGAACACACACATCAGAAGGAAACTTCTCAACCGTGGAATTGATCCTGCAACTCACCGGCCAGTCACCGACCACCCCACCACCCCCACCACCACCTCAACCACCGTCACCACCACCGTGAACAACCATAATGTCACCTCACCACCACCACCAGACATCATATCTTTTGCAACCACAAAAACAGCCCATGTCAAAAATGAAGAAATGGAAGAAGACACTAAGCTCAATATCACCTCACCTGATCATCAAAAACAAGAAAGATGTCCAGATTTGAACTTGGAGTTAAGAATTGGGCCACCACAACATCATAGTAGTAACATGATACCATCAATATCATACATGCAACAACCTTTGATGACTGGTGGAACAATATGTTTTGCGTGCAGTTTAGGTGTACAAGATAACAAGGAATGCAGATGTAGTGCTAATGCTACAAGTGGTAACAACAACAACAACGTTGGTTTTGATTTCTTTAAAATAAAAAATGGTGCTTTGGACTATAGAAGCTTGGAGATGAAATAA
Protein Sequence:
- >Aan020124|Artemisia_annua|MYB|gnl|UG|Aan#S54982389;PUT-183a-Artemisia_annua-20160997;PUT-183a-Artemisia_annua-529160989;PUT-183a-Artemisia_annua-77424
MSTLTVPPVLSSPRDDAMHLYKAFKGLGCDTAAVVNILAHRDASQRALIENEYRTMYHEELTKRLSSELSGNVKKAVLLWMPDPARRDAMILHDALTTDIDLKEATEVICSRTPSQIQYLKQLYHQLYGTYIEHAIQAQASGDLEQLLLAYLSTPRSEGLEVDRTMADHDAKALFKAGEKRLGTDEKTFRVIFSGRSRAHMAAVSSAYHNMYGSSLKKAVKGETSGNFEHALVTILQCAENPGKYFAKVMHRAMKGLGTNDKTLTRVIVTRTEIDMQYIKAEYYKKHHKSLNDAVHSETSGHYRHLPSFTLGPKSALGSRFWRLAYCKDSGSIFSVCVPEXGCSLXVFQLDFGYGEMLVKKSSMLKSVLCSVVMVTFLEMWKFTSKKMNLPLFVFLFLSPQKHTKIGKFKEESLNMGRSPCCEKAHTNKGAWTKEEDDRLIAYIRTHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEDEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPVTDHPTTPTTTSTTVTTTVNNHNVTSPPPPDIISFATTKTAHVKNEEMEEDTKLNITSPDHQKQERCPDLNLELRIGPPQHHSSNMIPSISYMQQPLMTGGTICFACSLGVQDNKECRCSANATSGNNNNNVGFDFFKIKNGALDYRSLEMK