Information report for 678411429
Gene Details
Functional Annotation
- Refseq: XP_011027944.1 — PREDICTED: transcription factor MYB108-like
- Swissprot: Q2QZJ8 — JAMYB_ORYSJ; Transcription factor JAMYB
- TrEMBL: A0A1J6IUC8 — A0A1J6IUC8_NICAT; Transcription factor myb108
- TrEMBL: B9HIK1 — B9HIK1_POPTR; Uncharacterized protein
- STRING: POPTR_0008s10080.1 — (Populus trichocarpa)
- GO:0008152 — Biological Process — metabolic process
- GO:0009651 — Biological Process — response to salt stress
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0003677 — Molecular Function — DNA binding
- GO:0003824 — Molecular Function — catalytic activity
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn228371
- Daucus carota: DCAR_030446, DCAR_030445
- Gossypium arboreum: Cotton_A_08735_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A02G0549, Gh_D02G0613
- Manihot esculenta: Manes.15G003000.1.p
- Nicotiana benthamiana: Niben101Scf03049g06001.1
- Nicotiana tabacum: XP_016511320.1, XP_016432352.1
- Populus trichocarpa: Potri.008G101400.1, Potri.010G149900.1
- Sesamum indicum: XP_011100718.1
- Solanum lycopersicum: Solyc05g053330.2.1
Sequences
CDS Sequence:
- >678411429|Utricularia_gibba|MYB|678411429
ATGGAGGGGATGAAGAACTGTAGCAGCGAGCAGAGCGAGGAAGATTCGTGTTCGAGGGAAGGGGAGCTGCGGAGGGGGCCGTGGACTGTTGAGGAAGATTTTGCGCTCATCAACTACATCGCCCGCCATGGAGAAGGCCGCTGGAATTCCCTCTCCCGCTGTGCTGGATTGAAGAGGACTGGGAAGAGCTGCAGATTGAGGTGGCTGAATTATCTGCGCCCAGATGTTCGACGAGGGAACATCACCCTCGAGGAACAGCTTTTGATCCTCGAACTCCATTCCAGATGGGGAAACAGATGGTCGAAAATTGCTCAGCATTTGCCGGGCAGAACAGACAATGAGATAAAGAACTACTGGAGAACGAGGGTCCAAAAGCATGCCAAGCAGCTGAAATGCGACGTCAACAGTAAGCAATTCAAGGACACCATGCGCTACTTATGGATGCCCCGATTGGTAGAGCGGATCCAAGCTACTTCTGGGTCTGCCTCTGCCTCCGGAGCCGCCGCCGTGAACGACAGTACTCCGGTGATGGGGTCCTCCTCCTCCTCCTCCGCCACTTCCCGCTTCAGCGACCGCAGCATAAACACCAACACGGCCTCAGGGCAAACCCAAGTTTTCTCTGGCTATGAACGAGAGGCTTGGGAGATCTCCCCCGCAGCGGCGTCCGACAAACCGGAATTTTACAACAACGATTCGTATCAGGTGAAGCAGGAGAACGGTTATCAGGGAAATCAGCTCCCCTATGCCATGACTGAGCATCAACAATCCATGAGCAACAGTCAATCTGGGTACGGGTACTACGATCAAGGGCTAGAGTTCATGGATCAGAGCAGCAGCCAGTGGATCACCGGAGCAAGCGTCGCCGAAGACTGGTATCTGGGCGACGATATGTGGTTCCTGCAACACCAAGAGCAGCCCACCCCGAACCCCTTGTTTTCTTTTTCATAA
Protein Sequence:
- >678411429|Utricularia_gibba|MYB|678411429
MEGMKNCSSEQSEEDSCSREGELRRGPWTVEEDFALINYIARHGEGRWNSLSRCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQATSGSASASGAAAVNDSTPVMGSSSSSSATSRFSDRSINTNTASGQTQVFSGYEREAWEISPAAASDKPEFYNNDSYQVKQENGYQGNQLPYAMTEHQQSMSNSQSGYGYYDQGLEFMDQSSSQWITGASVAEDWYLGDDMWFLQHQEQPTPNPLFSFS