Information report for 462909845
Gene Details
Functional Annotation
- Refseq: XP_015695776.1 — PREDICTED: myb-related protein Zm38-like
- Swissprot: P20025 — MYB38_MAIZE; Myb-related protein Zm38
- TrEMBL: C5YH31 — C5YH31_SORBI; Uncharacterized protein
- TrEMBL: J3MV25 — J3MV25_ORYBR; Uncharacterized protein
- STRING: OB08G29560.1 — (Oryza brachyantha)
- STRING: Sb07g024890.1 — (Sorghum bicolor)
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0010224 — Biological Process — response to UV-B
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:1903086 — Biological Process — negative regulation of sinapate ester biosynthetic process
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Glycine max: Glyma.11G107100.1.p
- Nicotiana benthamiana: Niben101Scf02025g02002.1
- Panicum virgatum: Pavir.6KG401200.1.p, Pavir.6NG354000.1.p
- Setaria italica: Seita.6G239700.1.p
- Setaria viridis: Sevir.6G246200.1.p
- Triticum aestivum: TaMYB4-7D
- Zea mays: GRMZM2G419239_P01, GRMZM2G084583_P01
Sequences
CDS Sequence:
- >462909845|Eragrostis_tef|MYB|462909845
ATGGGCCGGTCGCCGTGCTGCGAGAAGGCGCACACGAACAAGGGCGCGTGGACCAAGGAGGAGGACGAGCGCCTCGTCGCCTACATCAAGGCCCACGGCGAAGGGTGCTGGCGCTCGCTGCCCCGGGCGGCGGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACGCCCGACGAGGACGGCCTCATCGTCAAGCTCCACGCGCTCCTCGGGAACAAGTGGTCGCTCATCGCCGCGCGGCTCCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACCTACGGCGCAAGCTCGTCAACATGGGCATCGACCCCGTCACGCACCGACCCATCAACGACACCAAGACGGCCGGGGGCGACGGCAACGTCGTCGCCTTCCAGCCACCATCGCCGAACATGGTCAAGGCTTCGGCGGCGCCCAGGTGCCCCGACCTCAACCTGGACCTCTGCATCAGCCCGCCGTCACCGTTCCTCAGCGTGGAGGAAGAGGAGGACGTCAAGCCCTCAAACTCCAGGGCAGTGGACATGGTGGCCACGCCGGACGGCTCTGCTTCGGCTGCAGCCCCCTGGGGCGACGCCCTCATCGTCAAGCTCCACGCCGTGCTGGGGAACAAGTGGTCGCTCATCGCCGCCCGGCTCCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACCTACGGCGCAAGCTCGTCAACATGGGCATCGACCCCGTCACCCACCGGCCCATCATCAACGTTGAGGCTGATAAGGCTGCTGGGGCCGACGGCGACGTCGTCGCCTTCCAGCCACAGCCGAAGATGCAGAGGCCCAGGTGCCCCGACCTCAACCTCGACCTCTGCATCAGCCCGCCGTCACCGTTCCTCAGCGTGGAGGAAGAGGAGGACGTCAAGCCCGTAGTCAAACCCCAGGGCGCAGGACGGCTCTTTTGCTTCGGCTGCAGCCCCCTGGGCCTCAACAACAACAACAACAACAACAACAAGGGGATCGCCAGCGACTGCACCAACTGCAGCAGCAACAACCACTTCCTGGGGCTCAGGCTCGGCATGCTCGACTTCAGAGGCCTCGAAACGAAATGA
Protein Sequence:
- >462909845|Eragrostis_tef|MYB|462909845
MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPRAAGLLRCGKSCRLRWINYLRPDLKRGNFTPDEDGLIVKLHALLGNKWSLIAARLPGRTDNEIKNYWNTHLRRKLVNMGIDPVTHRPINDTKTAGGDGNVVAFQPPSPNMVKASAAPRCPDLNLDLCISPPSPFLSVEEEEDVKPSNSRAVDMVATPDGSASAAAPWGDALIVKLHAVLGNKWSLIAARLPGRTDNEIKNYWNTHLRRKLVNMGIDPVTHRPIINVEADKAAGADGDVVAFQPQPKMQRPRCPDLNLDLCISPPSPFLSVEEEEDVKPVVKPQGAGRLFCFGCSPLGLNNNNNNNNKGIASDCTNCSSNNHFLGLRLGMLDFRGLETK