Information report for 39026
Gene Details
Functional Annotation
- Refseq: XP_003057507.1 — predicted protein
- TrEMBL: C1MN26 — C1MN26_MICPC; Predicted protein
- STRING: XP_003057507.1 — (Micromonas pusilla)
- GO:0009723 — Biological Process — response to ethylene
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0010200 — Biological Process — response to chitin
- GO:0048527 — Biological Process — lateral root development
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g55040.5.p, Bradi2g55040.3.p, Bradi2g55040.2.p
- Cicer arietinum: XP_004491024.1
- Citrus sinensis: orange1.1g017566m
- Daucus carota: DCAR_028587
- Fragaria vesca: mrna21001.1-v1.0-hybrid
- Glycine max: Glyma.14G058100.2.p
- Lactuca sativa: Lsa009424
- Lotus japonicus: Lj2g3v2771150.1
- Ricinus communis: 27798.m000612
Sequences
CDS Sequence:
- >39026|Micromonas_pusilla_CCMP1545|MYB|39026
ATGGCTAGATCTGGCTACGGCTTCAGCTCTACTAAGCCAACAGTGGATAACATCACTGCTGGGTTGAAGCTGGCCAGCCCGGTGACCAACACACCCCAAGAAGTTCATGGAAGCCATGATGTCACCACCGCCTCCCACAGCAAGGCCACGCCCACAGGTGGTGGAAGCAGCAAGCGCAAAGGCGCGGCGACCGAGGCGGAGCACACACTACATATTTTGAAAAAGAGGGAACAACGGAAGGAGATGAAGAACATGCACAATGATTTGCGCTCTATCCTCCCAGGGCTTTCTCAGAAGGCTGACAAGGCTACTATATTGGGAGAAGCCGTGAATTACATCAAGACTCTCCAAGACAACATCCGGAGGCTACAGAGACTGAAGTTGGAGCAAAACCATTCACAACAGCTTCTTCAGCTTGGTCTCAGTGTTGCACATCTGCCTTCAGTTAGCCATGGCACAGCAGCGCCAAACGCAAGAGAGTTGATCATGGAGGACATGGTCCAGAGCCTGAACGCACAGCAGACGGCAGCGAGCGTGTCAGGAAGCTCCGTGATGCCACGGGTCGCCGTCAACATGCTCCCATCAGGGCCTAATGTCGCCATGAGCGTGACTGGCGATGACGGCTTCATTAACGTGTGCGCCCCGCGTCAGTATTCCTTGATGAAAAAGGTGTGCTCTGTGCTGGAGAAGCACCGCATCGACCTCGTGAGGGCAGACATCTCGTCCGACAAGTACCAGAGCAAGATCTCCATCCATGCTCGTATCAATTCAGCATCTGCCCACTTCTTGGAGGACATAACGGCTGAAGATAGGTACAAGCTGGCAGTTTCAGAGATGGTGCGATCGTTGGCCAATTGA ATGGCTCCGTCCAGTGGGACATCTTCAGGCTCCTCCTCCATGAGTCATCAAAACTCAGGCTCTGAGGAAGACTTGATGGCTCTGATGGACCAGAGGAAGAGGAAGAGAATGGTTTCGAACCGCGAATCGGCTAGGCGGTCTAGGTTGAGGAAGCAGAAGCACTTGGATGATCTGACGGGCCAGATCAACCAACTGAAGAAGGAGAACCATCAGATCATCTCCAGCCTCAACATCACAAGCCAGCATTACATGAACATGGAGGCAGAGAACTCTGTTCTCAGAGCCCAAGCTGATGAGCTCAGCAGCAGATTGCAGTCCCTCAATGAGATTGCCAGTTTCTTGAATGCAAACAATGGTGGGCTCTATGCAGCTGCTGCAGATTCAAGCTGCTTCAATGAGCCTAATAGCAGTTTCTTCGACCCCTTGAATCTGTCAAATCTTAATCAGCCTATTATGGCCTCTGCAGATATGTTTCACTACTGA ATGACGAACGTCGACGAGGACGGCGATGACAAGATGAAGAAGAACTCGTGGACGCCGGAGGAGGACGAGCGCCTGCGGGAGCGCATCGCGGCGCACGGCCCGGGGAATTGGTCCGCGGTCGCGGCGTTCCTCGAAGGTCGCAGCAGCAAGAGCTGCAGGCTTCGGTGGTGCAATCAGCTGAACCCGGACGTGAAGCGCGGGCCGTTCACCGCGGAGGAGGACAAGCTCATCCTCGCCGCGCACGCGATGCACGGGAACAAGTGGGCGATCATCTCGAGGTCGATACCGGGCAGGACGGACAACCAAGTGAAAAACCGGTACAACTCGACGTTACGTCGCGTCTCCACGACCGCGCGTCGCGAGCGCGACGCCGTCGCGAAGGCGCCGGCGAAGCGAAAGGCCACGAATACGGAGGCGGCGGCGTCGCCGGGGGAGGCGGCGTCGCCGAGCGCGAAGAGATCGAAAAAGCCGCCCCCGGAGCGCGCGCCGCCGACGCCGACGACGGTCTCCCCGAAACGCGCGCGCGCGGTCTCCCCCTCCAGCGGCAGCGAGGTGGACGAGACCGTCACCGGTCTAGAGCGGCTCGTGCAGGCGTCCTTCGCGGTTGAGCGCGAGGAGGGGGAGGAGCGGGATTCGGGATTCGGGATTCGGGATTCGGGATCGGACGCGGCGACGGCGTCCGCGGCGGTGGCCGCGTTCGACGCGAACGCGAACGCGACCGTCCACGGCGGGTTCAACATCGCGGACCAGGCGCGCATCATGATGGCGAACATCCAGATGACGGCGCAGCTCGCGCAGCTGGCGGCGATGTCGCGCGGGGCGGCGCCCGCGCTCTCCGCGCCGGCGGGCGAGGGTCCCGGCTTCGGGGCGACGGCGGCGGCGGCGACGGCGGCGGCGGCGCCCGCGTTTTTCGGCGGCGGCGGCGGCGCGGCGGCGGCGGCGGCGTCGCCGCCCGCGTCGCAAAACGCGTCCACGCACGGGGAGAACCACTTCCTCAGTCACGCGCACGCGCAGATGATGGCCGCGACGTTCGCGGCGGCGGCGGCGGCGGATGGAGGAAGGCGCGTTCTATACACTGGTTCCCATACGACCACGTCGGCGTGGTGA ATGAAGCCTCCAACGTCGGTGAGACCTTATGTAAGATCAAAAGTGCCGCGGCTGCGATGGACTGACGATCTCCACCGTTGTTTCGTTGAGGCCGTCGAAAGCTTAGGAGGCGAAAATCGAGCAACTCCTAAGATGGTTTGGGAACTGATGGATGTGAAGGGCCTCTCAGTATCTCATGTCAAGAGCCATTTGCAGATGTTCAGAAGCATGAAGCAGGAACGGATGCTACAAGAGGTGGAAATGGCGAATAGAAACCCTAGAATGGCGGCGAATCAGGCGATTTGGGAGTTCCAACAATACCATTATTTTGAGCAGCTTAGAAGATTTGGCTACATCATGTCCGACCCTCAGAGGGAAGAAGAGAATATAATTCAATTCGGGAGCTCGGAAGAGACAGGTGGCGGAGAGAGCAGTAATCTCCATGATAACCAAATCGAGAATGATCATGTCATTTGCCAGAGTCTATACGAGCGTTCAACCGTGAAGAGAAGACGCAGAGGAAAGGCTCGAGGTTTAGAGAGTTCAAAAGGGGAGGAAGAGGAATGTGGTCTGACGTTGTCCCTGAACCTGGAGCCACCTGCCGCTGAGAGCTCAAGCCACCATGAAGACTTGTCCCTTGACCTCACTCTCGCTCCTACTTCCAAGCCCTGA CTGAACCTCAACAACTTTCTTTGGCCTCTAGGGATCACACCAACACCAACATCATCAAAGGCAAAAGAACCAAAAGGGTTAGGCCACAATCTCCTATACCTTTTTCCATCACTGCTAATTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGAGAAGATTGCAACAACGGTAATGATGTCGTCGTCAACAACAATATCAACAATAATAATAACAGCTCTCCAACAACTTCTTATGTAGCTGAAAAACAGGAGGACAATATTCTTGATGAAGAATATGATATGGCAAATTGTTTGATATTATTGGCACAAGGACAATCAAGGGATTCATCGAAAAATACCGATGAATATGACGGTGGAATGATGAACTATACAAAATACAGCAGTAGAAAATTCATGGAAGCTGCTACTTTGGATTCTGGAAGAGCAGGTTACTATGTTTATGAATGCAAAACATGTAATAGAACTTTTCCTTCATTCCAAGCACTTGGTGGCCATAGAGCAAGTCATAAAAAGCCAAAAGCATTGGCAATTGCTCAAGAGAGAAAACAACTTTTTGATGATGATCAAGATTTTCAATTCAAAACCAATCATAAATCAATTTCCCTTCAATTGAACAACAATGGTAAGGGAAATCTTTACGGCGGAAACAACAACAGCAACAACAACAATAACAACAATAAGTCTAAGGTTCATGAGTGTTCCATTTGTGGTTCTGAATTCACATCTGGTCAAGCACTTGGTGGGCATATGAGGCGACACCGCGCGCCGGTGGGGACCACTGCTCCTGCCAACACCACACTTTCCTTGACACCAATGGCTTTGGAACATGATGAAGATCAACCTAGAAAGAAAAGGAATGTTTTGTCTTTGGATTTGGATCTCAATCTTCCTGCACCTGAAGATGAACATAGAGAATCAAAGTTTGCCTTTGCTTCCAAGCAACAACAACAACATGGCCAAAAACAACAACAGCAACAGCAACAACAACAACAACAAACAAATCTTGTCTTCTCTTCGCCGGCTTTGGTGGATTGTCATTACTAA
Protein Sequence:
- >39026|Micromonas_pusilla_CCMP1545|MYB|39026
MTNVDEDGDDKMKKNSWTPEEDERLRERIAAHGPGNWSAVAAFLEGRSSKSCRLRWCNQLNPDVKRGPFTAEEDKLILAAHAMHGNKWAIISRSIPGRTDNQVKNRYNSTLRRVSTTARRERDAVAKAPAKRKATNTEAAASPGEAASPSAKRSKKPPPERAPPTPTTVSPKRARAVSPSSGSEVDETVTGLERLVQASFAVEREEGEERDSGFGIRDSGSDAATASAAVAAFDANANATVHGGFNIADQARIMMANIQMTAQLAQLAAMSRGAAPALSAPAGEGPGFGATAAAATAAAAPAFFGGGGGAAAAAASPPASQNASTHGENHFLSHAHAQMMAATFAAAAAADGGRRVLYTGSHTTTSAW*