Information report for 34891
Gene Details
Functional Annotation
- Refseq: XP_001419697.1 — predicted protein, partial
- Swissprot: Q0JHU7 — MB3R2_ORYSJ; Transcription factor MYB3R-2
- TrEMBL: A4S269 — A4S269_OSTLU; Uncharacterized protein (Fragment)
- STRING: ABO97990 — (Ostreococcus ’lucimarinus')
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0032875 — Biological Process — regulation of DNA endoreduplication
- GO:0003677 — Molecular Function — DNA binding
- GO:0003713 — Molecular Function — transcription coactivator activity
Family Introduction
- MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the ‘oncogene’ v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
- In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as ‘MYB1R factors’, with two as ‘R2R3-type MYB’ factors, and with three repeats as ‘MYB3R’ factors.
Literature and News
Gene Resources
Homologs
- Citrullus lanatus: Cla017897
- Cucumis melo: MELO3C003578P3, MELO3C003578P1
- Gossypium arboreum: Cotton_A_07211_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A07G0175
- Musa acuminata: GSMUA_Achr10P26610_001
- Panicum virgatum: Pavir.5NG582600.1.p
- Vitis vinifera: GSVIVT01034171001
Sequences
CDS Sequence:
- >34891|Ostreococcus_lucimarinus|MYB|34891
ATGGATTCTGACATAATGAACATAATGATGCAGCACATGGAGAATCTTCCTGAGTTCTATAACACTAATCCCTCTCTCATCGACCACACCAACAACACCTACCCTTTTCTGTTCAACTCAAACCATAACCACTCTGACTCAATGACCCACGAACCCGGTTTCCGGTATGGTGCTGGTTTACACGCTAGCCCAGCTTACTCTTCCATTTTACACGACAAAAGACACAATATTAGCAACACCGATAACACGAACATGGCAGCGATGCGAGAGATGATCTTTCGAATAGCCATGATGCAACCAATACATATAGATCCCGAGGCGGTGAAGCCACCTAAGAGGAGGAACGTTAGGATCTCTAAAGATCCACAGAGTGTGGCTGCTCGGCACCGAAGGGAGAGGATAAGCGAGAGGATTCGGATTTTGCAACGGCTTGTTCCTGGTGGAACCAAGATGGATACAGCTTCGATGCTCGACGAGGCTATTCATTATGTGAAGTTTCTAAAGAAACAAGTGCAGTCGCTGGAAGAGCAAGCGGTGGTTAACGGCGGAGGAGTGGCTATGAAAGGGTGTGGAGCAATGGGGACTACTCATCAGATGGTGGGCAATGCACATATTCTTAGATGA CGCCGTGCGCGCGTCGCGAGCAGGAAGATCGGAGGACCGACGCGGAGAAGCGCCAAAGGAGGATGGACACCCGAGGAGGATGAATTGTTGCGCGGCGCGGTGGCGGTGTACGGGGGGAGGAATTGGAAGAAGATTGCGGTGTACTTTAGCGATAGCCGCACCGACGTGCAGTGCTTGCACAGGTGGCAAAAAGTGCTCAACCCCGAACTGGTGAAAGGGCCGTGGACCGCGGAGGAGGACGCGCGAATCATCGAGCTCGTCACCGAACTCGGGGCGAAGCGATGGTCCAAAATCGCGGGCGAGCTTCCTGGGAGAATCGGGAAGCAATGCCGCGAGAGATGGTACAACCACCTCGACCCGGAGATCAAGCGCGAGGAGTGGAGCGCAGACGAGGACCGTCAGTTGATCATCGCGCACGCACAGTACGGCAATCGCTGGGCGGAAATCGCCAAGTCTTTCAAAGGACGCACCGATAACGCGATTAAAAATCACTGGAACTCCACGTTGAAGCGCAAGGTGGACCAAGCGTTGAATCAAGGG ATGCCCTCAGGCAGCATCTCGGCTTTCCCTTCGACATTAAGCAACATCCAGAGAACAGGGAACAGCACTGGTGGCACGAACCAGGCATGTGCTGCCTGCAAGTACCAACGTAGGAAATGTGCCCCTGACTGTCTTCTCGCCCCTTACTTCCCTCACGACCGTCACCGTCAGTTCTTGAATGCCCACAAGCTCTTTGGTGTCAGCAATATCACCAAGATCATCAGAACGCTTAACCTGCCCGAGAAAGATGCAGCCATGAACTCCATCATGTTTCAATCAGATGCTCGAGCCAAGGATCCTGTTGGTGGCTGTTACAGAATCATAAGGGAGCTCCAATACGAGATCGAGTGCACCAGGAACGAGCTCGATCTCGTTCTTCAGCATCTGGCTCTGTTCAGGGAATGTGCCCATCAAGAACCGCGCACCCAGATCCAAGAACCAGAGGATATCTCCAGTTTTTCGAGTTCTTTTGATCTGAATAACTCATTACCATGTAGTTATCCCCTTCACGAGCAAGCACAAGAACAGCAGTTCTGTACTTTTACAGGGTTGCAAGAAGATATGTGGTGTCTGCAGCTGCAAGAATCGTCAACAACAGCGAATATGGAACAGGTTGAAGATGTCTCAAGCGAAAGACATGAACATGTCGAGTTCGAGCATGAAGGTTTTGCGGAAAGGAATCTGAACATGGCTTCTGCACAATTGATCATATCCTCATAG
Protein Sequence:
- >34891|Ostreococcus_lucimarinus|MYB|34891
RRARVASRKIGGPTRRSAKGGWTPEEDELLRGAVAVYGGRNWKKIAVYFSDSRTDVQCLHRWQKVLNPELVKGPWTAEEDARIIELVTELGAKRWSKIAGELPGRIGKQCRERWYNHLDPEIKREEWSADEDRQLIIAHAQYGNRWAEIAKSFKGRTDNAIKNHWNSTLKRKVDQALNQG