Information report for 69621
Gene Details
Functional Annotation
- Refseq: XP_002986599.2 — LOB domain-containing protein 22
- Refseq: XP_024525621.1 — LOB domain-containing protein 22
- Swissprot: Q9STS6 — LBD27_ARATH; LOB domain-containing protein 27
- TrEMBL: D8R2Q3 — D8R2Q3_SELML; Uncharacterized protein (Fragment)
- STRING: EFJ12456 — (Selaginella moellendorffii)
- STRING: EFJ34109 — (Selaginella moellendorffii)
- GO:0009556 — Biological Process — microsporogenesis
- GO:0009786 — Biological Process — regulation of asymmetric cell division
- GO:0005634 — Cellular Component — nucleus
Family Introduction
- The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.
- The LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.
Literature and News
Sequences
CDS Sequence:
- >69621|Selaginella_moellendorffii|LBD|69621
ATGGCAAGCAACGAATCAGTGACCCAACCAATTGAGAAAACTGATCGTCATGTCATAAACGTTTTACTGTATCCATCAAATAAAGTAAGATATGCAGAGTGCAGGCGTAATTATGCAGCATCCGTAGGTGGATTTGTTTTAGATGGTTGTGGCGAATTCATGCCAAGGCAAGGTAGTCAACAAGTCGAATTCTGTGACGCTTGTGGTTGTCATAGAAATTTTCATCGCGAAATGTTGATTGAAGGCAATGTAGCCGGTGTTGCTAACCTGTATTTATTTCCTCCTCCACCACCACCACCTCCATCGCCATCGCATTCATCGAAACCAAAGGGTGTCTTAAAGGTTTATCCATCTACTATGGGAGCAAAGCACTACTAA ATGAGCAGAGACATCGACGAAGGAAGCGTTTCGGCGGCGACAGCAGGAGGAGGAGGAGGGGAAGTGGGTGGCGAGCCGGCGGCCGGCGTCGGCGACGAGGCAGCCGTCGACTCGCACGAGAACGACCTGGTGATGCCGGGGTTCCGGTTCCACCCGACGGAGGAGGAGCTCATCGAGTTCTACCTCCGGCGCAAGGTGGAGGGCCGGCGCTTCAACGTCGAGCTCATCACCTTCCTCGACCTCTACCGCTTTGACCCATGGGAGCTCCCC ATGAGCAGAGACATCGACGAAGGAAGCGTTTCGGCGGCGACAGCAGGAGGAGGAGGAGGGGAAGTGGGTGGCGAGCCGGCGGCCGGCGTCGGCGACGAGGCAGCCGTCGACTCGCACGAGAACGACCTGGTGATGCCGGGGTTCCGGTTCCACCCGACGGAGGAGGAGCTCATCGAGTTCTACCTCCGGCGCAAGGTGGAGGGCCGGCGCTTCAACGTCGAGCTCATCACCTTCCTCGACCTCTACCGCTTTGACCCATGGGAGCTCCCCGCAATGGCGGTGATTGGGGAGAAGGAGTGGTTCTTCTACGTGCCCCGGGACCGCAAGTACCGGAACGGCGACCGGCCGAACCGGGTGACGGCGTCGGGGTACTGGAAGGCGACGGGGGCAGACAGGATGATCCGCGGCGAAAACAGCCGGCCCATCGGCCTCAAGAAGACGCTCGTCTTCTACTCCGGCAAGGCCCCCAAGGGCGTCCGCAGCAGCTGGATCATGAACGAGTATCGCCTCCCGCCGCCCACCACCGACGCCGATCTCTTCTACAAGTCCGAGATCTCGCTCTGTCGCGTGTACAAGCGCTCAGGCATCGACGACGGCCACGGGCGGCCCTCCTCCAGCAACGTCCAAGCGGCCTCGGCGAGACCGGGCACCTCACGCATTATTATTCCGCCGGCTGGCCAGCAGGTGTCATCACCGTCGGCCACGCCGCTGTCACCGACACAGCAGCCCAGCTTCCACGGCCTAGTCGGCCAGGGGGAGTGCTCGTCGGCGCCGCTACCAGCCATCATGGACCAGGGCACCCAACACAATAATGCCCCGCAGCTGCACCAGCCGCCGCCACCTCCTCCCCCGAGGCCGAGCGCCTATGCGTCGGCGATGAGCTCAACAATGTCGGTTGCGCCGGCCGAGAGGGCCTGCACGTACTCGCTTATGGCCCTGGCAGACGCGCCCATGATGGGCAGCAGTTCCACGGCGGGGGACGAGCTGAGCCGGCTGGTGGGCCACAGCCAGGCCTACCCTAACCACCCGGCCGTCGGCAGCCACTTCCTCCCCTCACCATCATCGTCACAAATTCCGCCCCTCGGAGAGATGCCGGTGTCGCCGGCTGACAAGCTTTGGGATTGGATCCACCCTGACACCACAGGAAGCAGGGACTACGGCAGTTCTAGTTTTAAATGA ATGAGCAGAGACATCGACGAAGGAAGCGTTTCGGCGGCGACAGCAGGAGGAGGAGGAGGGGAAGTGGGTGGCGAGCCGGCGGCCGGCGTCGGCGACGAGGCAGCCGTCGACTCGCACGAGAACGACCTGGTGATGCCGGGGTTCCGGTTCCACCCGACGGAGGAGGAGCTCATCGAGTTCTACCTCCGGCGCAAGGTGGAGGGCCGGCGCTTCAACGTCGAGCTCATCACCTTCCTCGACCTCTACCGCTTTGACCCATGGGAGCTCCCCGCAATGGCGGTGATTGGGGAGAAGGAGTGGTTCTTCTACGTGCCCCGGGACCGCAAGTACCGGAACGGCGACCGGCCGAACCGGGTGACGGCGTCGGGGTACTGGAAGGCGACGGGGGCAGACAGGATGATCCGCGGCGAAAACAGCCGGCCCATCGGCCTCAAGAAGACGCTCGTCTTCTACTCCGGCAAGGCCCCCAAGGGCGTCCGCAGCAGCTGGATCATGAACGAGTATCGCCTCCCGCCGCCCACCACCGACGCCGATCTCTTCTACAAGATCTAA ATGGATATTAAGGAAGCAGAGCGTGTAGTTATAGCTAAACCAGTTGCTTCAAGGCCAACTTGTTCCACCTTTAGGTCCTTCACGGAGCTTCTTGCAGGAGCTATTGATGCTTCTCCTTTGAATGTATCTTCTGAAACTGCTGTTCCTGCCATCAGACCAAAGACCGTGAGGTTCAAGCCAATGGTGAATCATACTGTCGCTGGATTGGTTTCTTCCCAGGCACATATCTCTGGTGCAGCACATAGTCATTCATCGGAGCAGGTTTCGAAATCAGATAGCAGATCAACTGTGATATATAAACCATTGGCAAAAGTTGTTTCAAGGGCAACCTTTTCTGTCTTGGCAAATATGGGAAACTTCAATACCAGCCACCAATCTACACAATCATCAGTTAATGTGGGTGTTCTACATCCAAATCAAGATAAATGCTTTAGATCCCAAAGCGCAAATCTGCACCATAATAATCCATCATGTGCCGAGACAAATCAGACAACAGAGCCTCCGAAAATAGCCTCACAAAACATGGAAGAGGATCTGAAACTTATACCATCCACAGCCAATACTGATAGGCCTTCTTATGATGGGTATAATTGGAGAAAATATGGACAGAAGCAAGTCAAAGGAAGTGAGTACCCCCGAAGTTACTATAAGTGCACTCATCCAAATTGTCCTGTGAAAAAGAAGGTTGAACGATCTCTGGATGGCCAGATTGCTGAGATTGTGTACAAGGGGGAACACAACCACTCAAAGCCTCAGCCTCCAAAGCGGAGCTCATCAGGGACGCAAGGGTTAGGCGTACCATCTAATGGAACTGGTCAAGATACCAACAACCGGCTATTGAATAGTCATATTAATGAAAGAAATGAAGGTTCCGAAGGTAGAGTAGAAGATCAAAATGAAGTTGGACTACCTGTGCAGTCTTACCAAACCAAAGCTCCACTACCTTATGATCCCCATGCGACTGGAGGAATAACTGCTGGTGGTGCAACTCCTGATAATTCTTGTGGTCTTAGTGGCGAATGTGAGGAAGCAAGTAAGAGGCTTGAAGCAGAGGATTATGAACCTAGAAGTAAAAGAAGAAAAAGTGAGAATCATTCCCTTGAAGCAGGGATATCAGGGGAAGGTGTCCAAGATCCTCGTGTTGTGGTGCAAAATTCTGTTGAATCTGATATGACGGGTGATGGCTTCCGCTGGAGGAAGTACGGGCAGAAAGTTGTTAAGGGAAATCCATATCCCAGAAGTTATTACAGATGTACCAGTCTCAAATGCAGCGTGCGCAAGCATGTCGAAAGAGTCTCGGATGATCCCAAAGCTTTCATCACCACGTACGAGGGAAAGCACAACCACGACATGCCACTGAGGAACACGAACGCAGGAGCATCTGAGAAGGATACAACAACTAAAGAAAAGCCATGA ACGAGCCAGGCGTGCGCCGCTTGCAAGTTCCAGCGGCGAAAGTGTCCGGTGGACTGCCCGCTCGCGCCGTACTTCCCCGCCGAGGCCAACCAGAGATTCCTGAGCTGCAAGAGACTGTTCGGCGTGAGCAACATGCTGCGCTTCCTGCGGGACGCGGACCCGGCGGACAAGGAGGAGACGATGAAGTCACTTATCTACGAGGCGGAGGTGCGGGACAAGGACCCGGTTCACGGCTGCTACGGGATCATCTCGCAGCTGACGGAGCGGGTCAGGGGGCTGCAGCGGGAGCTGGAGCTCACCCGGAGC
Protein Sequence:
- >69621|Selaginella_moellendorffii|LBD|69621
TSQACAACKFQRRKCPVDCPLAPYFPAEANQRFLSCKRLFGVSNMLRFLRDADPADKEETMKSLIYEAEVRDKDPVHGCYGIISQLTERVRGLQRELELTRS