Information report for Tp_un0031_011
Gene Details
|
|
Functional Annotation
- Refseq: XP_006397697.1 — scarecrow-like protein 27
- Swissprot: Q7XJM8 — SCL27_ARATH; Scarecrow-like protein 27
- TrEMBL: A0A1J3J2Q1 — A0A1J3J2Q1_NOCCA; Scarecrow-like protein 27
- STRING: XP_006397697.1 — (Eutrema salsugineum)
- GO:0048768 — Biological Process — root hair cell tip growth
- GO:0051301 — Biological Process — cell division
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Arabidopsis thaliana: AT2G45160.1, AT2G45160, AT3G60630.1
- Brassica napus: GSBRNA2T00067696001, GSBRNA2T00018011001, GSBRNA2T00138967001, GSBRNA2T00101513001
- Brassica oleracea: XP_013587928.1, XP_013587927.1, XP_013587926.1, XP_013630167.1
- Brassica rapa: XP_009133708.1, XP_009104096.1
- Raphanus raphanistrum: RrC1378_p3, RrC2242_p2
Sequences
CDS Sequence:
- >Tp_un0031_011|Thellungiella_parvula|GRAS|Tp_un0031_011
ATGCCCTTATCCTTTGAAAGGTTTCAAGGGGAGGGGGTGTTTGGTGTTTCTTCTTTCTATTCAGATCCTCAGAAAATCTGGTTTAATCAAGAGAAAATCGGAATAAGAAGAGAAGAAGATCTTGGTTATGTTGTCGGTGGTGGTTTGCCGGAGCCGACGTCTGTTCTCGACGCTTTAAGGAGTCCAAGTCCTCTCGCTTCTCACTCTTCAACCACCACCACGACGCTGTCTTCCTCTCACGGCGGTGGTGCCGTTACCGCCACCGCAACCGCCGGTGATGATAAATGTAGTCAATTGGGTTTAGATGATCTCGACGGAGTTCTCTCCGCTTCTTCTCCTGGTCAAGAACAGAGCATCCTGAGGCTTATCATGGACCCGGGTTCAGGATTCGGTGTTTTCGACCCGGGGTTCGGATTCGGATCCGGGTCTGTTCCGGCGACTGAAAATCCGAATAATTTGTTGTCTTGCAGCTTCCCGTTTCAAGAGATTGCGAATCCAGAAGCGTTGATCAATCCGAATCAGAATCCCTGCTTGTTCTCTAATCCTCCGTCATCTCCGCCGGCGAAACGGTTTAACTCGGGATCTCATCAAGCTTTCCCCTTTTCGGATCCGGATCCGGGTCACGACCCATTTCTCGTTCGTCGTCAGCAACAATTCCAGTTTCCGTTTCAGTTCCACCAGCAACAAATCCCGTCTTCTTCTTCGTCCGCGGCGGCTTTGGTTCCGGTTCCGCCGCCGGGAATGGCCGGCGATGACCAGTCAGTCATCATCGAGCAGCTGTTCAACGCGGCGGAGCTAATCGGAACCACGGGAAACAACAACAACGGCGACCACACCGTTCTCGCGCAAGGGATATTGGCGCGGCTCAATCACCATCTCAACAGTAGCTACAACAACAACAAAGCTCCGTTTCAAAGAGCGGCTTCTCACATCGCCGAAGCTCTCCTCTCACTCATCCACGACGCATCACCACCGTTAATCACCCCGGAGAATCTGATTCTTCGAATCGCCGCTTACAGATCCTTCTCCGAAACCTCGCCGTTTCTCCAATTCGTCAATTTCACGGCGAATCAATCGATTCTCGAGTCGTGCAACGACGAGTTAGGGTTTGATCGGATCCACATTATCGATTTCGATGTTGGATACGGAGGACAATGGTCATCATTAATGCAAGAACTTTCTTCGGGTGGAGGAGGAAGAAGAAGAAACAGAGCATCATCTCTGAAAATAACAGTCTTTGCTCCTCCTCCTTCCACAGTCTCCGACGAATTCGAGCTCAGGTTCACAGAGGAGAATCTCAGAAGTTTCGCCGGAGAAGTCAAGATTCCGTTCGAAATGGAGCTATTGAGCCTCGAGCTTCTTCTAAACCCAGCTTATTGGCCTCTCTCTCTCCGTTCATCGGAGAAAGAAGCAATCGCAGTGAATCTTCCCATAAACTCTGTCGTCTCCGGTTACCTCCCGTTAATCCTCCGTTTCCTCAAACAGATCTCACCGAATGTTGTCGTTTGTTCAGACAGAGGATGTGACCGTAACGACGCCCCGTTTCCTAACGCCGTGATCCACGCGCTTCAATACCACACCACTCTGCTGGAGTCACTCGACGCCAATCAAAGCCAAGACGATTCGAGTGTCGAGAGGTTTTGGGTGCAACCTGCGATCGAGAAGCTGTTAACGAAACGACACCGTTGGATTGAAAGATCTCCGCCATGGAGAAGCTTGATTACACAATGTGGGTTTTCTCCGGCGAGTTTGAGTCAGACGGCGGAGGCTCAGGCTGAGTGTTTGTTGCAGAGGAATCCGGTGAGAGGGTTTCACGTTGAGAAAAGACAGTGTTCACTTGTCATGTGTTGGCAAAGGAAAGAACTTGTTACTGTCTCTGCTTGGAAATGTTAG
Protein Sequence:
- >Tp_un0031_011|Thellungiella_parvula|GRAS|Tp_un0031_011
MPLSFERFQGEGVFGVSSFYSDPQKIWFNQEKIGIRREEDLGYVVGGGLPEPTSVLDALRSPSPLASHSSTTTTTLSSSHGGGAVTATATAGDDKCSQLGLDDLDGVLSASSPGQEQSILRLIMDPGSGFGVFDPGFGFGSGSVPATENPNNLLSCSFPFQEIANPEALINPNQNPCLFSNPPSSPPAKRFNSGSHQAFPFSDPDPGHDPFLVRRQQQFQFPFQFHQQQIPSSSSSAAALVPVPPPGMAGDDQSVIIEQLFNAAELIGTTGNNNNGDHTVLAQGILARLNHHLNSSYNNNKAPFQRAASHIAEALLSLIHDASPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNDELGFDRIHIIDFDVGYGGQWSSLMQELSSGGGGRRRNRASSLKITVFAPPPSTVSDEFELRFTEENLRSFAGEVKIPFEMELLSLELLLNPAYWPLSLRSSEKEAIAVNLPINSVVSGYLPLILRFLKQISPNVVVCSDRGCDRNDAPFPNAVIHALQYHTTLLESLDANQSQDDSSVERFWVQPAIEKLLTKRHRWIERSPPWRSLITQCGFSPASLSQTAEAQAECLLQRNPVRGFHVEKRQCSLVMCWQRKELVTVSAWKC