Information report for Spipo1G0098300
Gene Details
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Functional Annotation
- Refseq: XP_008800814.1 — protein DWARF AND LOW-TILLERING
- Swissprot: Q9CAN3 — SCL28_ARATH; Scarecrow-like protein 28
- TrEMBL: A0A1D1XIS6 — A0A1D1XIS6_9ARAE; Scarecrow-like protein 28
- STRING: XP_008800814.1 — (Phoenix dactylifera)
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Citrus sinensis: orange1.1g005954m
- Gossypium arboreum: Cotton_A_14441_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D12G2238, Gh_A12G2060
- Juglans regia: WALNUT_00007210-RA
- Musa acuminata: GSMUA_Achr4P19750_001, GSMUA_Achr7P05850_001
- Populus trichocarpa: Potri.003G122400.1, Potri.001G109400.1
- Prunus mume: XP_008238774.1
- Prunus persica: Prupe.5G091700.1.p
- Sesamum indicum: XP_011072178.1
- Ziziphus jujuba: XP_015896272.1
Sequences
CDS Sequence:
- >Spipo1G0098300|Spirodela_polyrhiza|GRAS|Spipo1G0098300
ATGTTGGCAGGGTGCTCTTCGACGCTGCTGTCTCTGAGGCATCGATTGAGGAGTGAAGCATCTGTTCCTTTCCAAGCTTGCCACCTGCAGGTGCAGGAGGATCTCTATCCTTCCCAGCAAAAGATGAGTACACAGCGTCTGGATCTCCCTTGCAGTTTCTCCCGGAAGGAGGGACCCCGGATCGCGCTCTCTCTGGATAAGGCCATCGAGACAACGGGAGGCTGCTCTTTCAGGCACAACCCAGCGGCCCCTTCGTCGTCTTCCTCATCCCTCGTCGCCCATGGGGCCTCATGGGAGTCCAGGAGGGACGCTGAGGGAGCCTACTGGGAGAGGAGTGCCCCGGGATTGAAGAGGTTCCATGAGTGGACCTCCTTCGACGATCACGTCGAAGAAAGGATTAAGAGGAAGAAGATCGGGAGCGACAGGCAGCAGCTGCCCGGCGGCGGCGATGGCGGCTGGTTTCCAAACAACACGGTTGAGCGGCCCCAAATGGAGCAAGAAGACAGACCCCGCTTCCTACCCGGTGTCGCCGTCTTCCCACCTCTGCCTTGTTCGAGCGCAGCTGTTGCAGACAGAGTTGAAGCCGAAGTGGGCACGAGCGAAGGATCAAAGCAGAACGTCAAATCGGACACAGGTTCCTCCTCCGGCTCCCGAAGCTCATCCCCTGATCTCAATGAGAATTCCTCGGACTACCCGCATGGAAGGGAAGCCAGAGAAGCAGTACCGGGAGACGGCGGCGACGCCGCGAAGCTGGTGCACCAGGGTCTTGAGCTGGTGAACTTGCTCACAGCCTGCGTAGAATCCATTGGCTCCCGTAATCACGAAGCGACAACCTTCTTCCTAGGTAGATTAGGCGAGCTTGCTTCTCCAGGGGGTTCGACCGTCCACAGGTTGGCGGCATACTTCACCGAAGCACTGGTCCTCCGAGTTGTAAAGCTCTGGCCCCACATATTCTCCATAGCTCCGAGGAGGGAGCTCCTGGATCGCATGGAAGACGACAGCACCATGGCACTCCGCGTTCTGAACGGCGTCAGCCCGGTCCTCAGGTTCATCCACTTCACCATCAACGAGAGGCTACTGAGGGCGTTCCAAGGTAAGGAGAGGATCCACATCATAGATTTCGACATCAAGCAGGGTCTCCAATGGCCGAGCCTATTCCAGAGCCTGGCCTCCAGGCCGAACCCGCCAGCGCAGGTGAGGATCACAGGGGTCGGCGAGTCGAAGCAGGAGCTTCAGGAGACGGGGGCCAGGCTAGCAGCGTTCGCAGAGGCCCTGAATCTGCCATTCGAGTTCCATGCGGTAGTGGACAGGCTGGAGGACGTCAGGCTTTGGATGCTTCATGTGAAGGAGAGGGATTCTGTGGCCGTGAACTGCGTCCTTCAGCTTCACAAGCTTCTCTATGACGACAGTGGAGCTGCCCTCACAGATTTCCTCGGTCTCATCCGGAGCACAAACCCGGAGATCGTTCTTATCGCAGAGCAGGAGGCTGCCAACAACGACCCGAGGTGGGAGACGAGGTTCGCCTCCTCACTTCAGTACTACTCCGCCGTGTTCGACATGGTGGACTCCTGCCTGCCACTGGAGAGCCCGGCCAGGGTCAAGGTGGAGGAGATGCTTGCTCGGGAGATCAGGAACATCGTCTCCGGCGACGGCGGAGAAAGGGTCGAGCGGCACGAGGTCTTCGGTGAGTGGAGGAAGATGATGGAAGAGAGGGGATTCAGGTGTGCTGGCATTGGGGAGAGGGAGAGGCTCCTCAGCCAGATGCTCCTTCGAATGTTCGCCTGCAAGAGCTACGGCCTGGAGAATCAAGGGGAGGAGGAACATGGCGGCGGCGGGCTCACCCTGCGATGGCTGGATCAGCCATTATACACAGTGTCTGCATGGGCACCTTGTGAAACGGCGGCCGCCCCCTCCTCCAGGTCCCCACCAGGCTGA
Protein Sequence:
- >Spipo1G0098300|Spirodela_polyrhiza|GRAS|Spipo1G0098300
MLAGCSSTLLSLRHRLRSEASVPFQACHLQVQEDLYPSQQKMSTQRLDLPCSFSRKEGPRIALSLDKAIETTGGCSFRHNPAAPSSSSSSLVAHGASWESRRDAEGAYWERSAPGLKRFHEWTSFDDHVEERIKRKKIGSDRQQLPGGGDGGWFPNNTVERPQMEQEDRPRFLPGVAVFPPLPCSSAAVADRVEAEVGTSEGSKQNVKSDTGSSSGSRSSSPDLNENSSDYPHGREAREAVPGDGGDAAKLVHQGLELVNLLTACVESIGSRNHEATTFFLGRLGELASPGGSTVHRLAAYFTEALVLRVVKLWPHIFSIAPRRELLDRMEDDSTMALRVLNGVSPVLRFIHFTINERLLRAFQGKERIHIIDFDIKQGLQWPSLFQSLASRPNPPAQVRITGVGESKQELQETGARLAAFAEALNLPFEFHAVVDRLEDVRLWMLHVKERDSVAVNCVLQLHKLLYDDSGAALTDFLGLIRSTNPEIVLIAEQEAANNDPRWETRFASSLQYYSAVFDMVDSCLPLESPARVKVEEMLAREIRNIVSGDGGERVERHEVFGEWRKMMEERGFRCAGIGERERLLSQMLLRMFACKSYGLENQGEEEHGGGGLTLRWLDQPLYTVSAWAPCETAAAPSSRSPPG*