Information report for Pp3c19_8310V3.2.p
Gene Details
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Functional Annotation
- Refseq: XP_024403888.1 — DELLA protein GAI-like
- TrEMBL: A7U4T6 — A7U4T6_PHYPA; AtGAI1 GRAS E3 ubiquitin ligase protein
- STRING: PP1S175_16V6.1 — (Physcomitrella patens)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009723 — Biological Process — response to ethylene
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009863 — Biological Process — salicylic acid mediated signaling pathway
- GO:0009867 — Biological Process — jasmonic acid mediated signaling pathway
- GO:0009938 — Biological Process — negative regulation of gibberellic acid mediated signaling pathway
- GO:0010187 — Biological Process — negative regulation of seed germination
- GO:0042538 — Biological Process — hyperosmotic salinity response
- GO:2000033 — Biological Process — regulation of seed dormancy process
- GO:2000377 — Biological Process — regulation of reactive oxygen species metabolic process
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0016874 — Molecular Function — ligase activity
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Sequences
CDS Sequence:
- >Pp3c19_8310V3.2.p|Physcomitrella_patens|GRAS|Pp3c19_8310V3.2.p
ATGGCGTATCAGTACTCTCCAGGTGGCAGTCGCTGGAAGCCGACTGGTGGGACTCTTGTGGATGGGCGACTCAGGCATGATAAATTTACACAAGCATCCGATGCAGTGCAGCAGTTGGAGGAGCTGCACACTTCCTTAGGCTCAGTATCTCAAGATTCACTTAACATTCCTGCTTATTACACATTGGGCTCTAGCTCACAGGCAGTTAGCAATTGCTCCACTGATCTGGCGGGATGGATTGACTGCATGATTGAGGAACTTTCTTCCAACACCGCCTGTCCAATAATGGCGCCGCAGCAGCAGCATGGACTTTTAGAAGGTTCTTTCCTAAAAAATGATCATGACGCTAGCTCCTGCCGTGATTCATTGTTGGAAACGGGATCACATAGGCTTTCAAATGTCCAGTTCCAAGATACTTCTGCTGCTAGGAATAAATCTTCGACGGCTCCTCATAATGGCACGTCGCAAGTAAATGCCATTCGTACCACTGCAGCAGGTTTAGAGCAGCAACTCAATAAAATGGGCGAGGATGAGAACAATGGCATTCAATTGGTGCATTCTTTGCTGGCATGTGCGGAATCCATCCAACGAGGGAACCTTAGTTTCGCAGAGGAGACTCTCCGTCGGATCGAGCTGCTTAGTCTGCCACCAGGACCTATGGGCAAAGTGGCAACTCACTTCATCGGTGCGTTGACTCGAAGAATTTACGGGGTCGCTTCCTCCAGCGGCAACAACAGCAGCAGTAATCAGTCAGATTCTCTCTTAGGGTTGTTGCACTTTTACTTCTACGAGTCGTGCCCGTTTCTAAGATTCGCGCATTTCACTGCTAATCAAGCCATTCTTGAGGCTGTCACAGGGCTGAAGGAGGTTCATGTGATTGATTTCAATCTAATGCAGGGGTTGCAGTGGCCGGCTCTGATCCAGGCTCTCTCTCTCCGGCAGGGTGGCCCTCCGCGTCTGCGGCTGACAGGCATTGGACCCCCACAACCTAGCGGAAGCGATACGTTGCAAGAGATTGGCACGAAGTTGGCCGAATTAGCGAAAACCGTCAGAGTGGATTTCGAGTTTAGGGGGGTGATCGCTGTAAAGCTTGACGACATCAAACCATGGATGCTTCAGATACGCCATGGCGAAGCGGTTGCAGTGAATTCTGTGTTACAGCTGCACAAGCTACTATATTCTGCCGGACCTGAAGCTCCTATCGACGCGGTTCTGCTCTTAGTTCGTGAATTGAAGCCCAAAATTTTTACTATTGTTGAACACGAGGCTAACCACAACCAACCCTCGTTTCTGGGTAGGTTTATAGAGGCTTTACACTATTATTCAACCATGTTCGACGCGCTGGAAGCGTGCAACTTGCCTTCCGAGAACAACGAACAAGTCCTAATTGAGATGTACCTCGGCCGAGAAATCTACAACATTGTAGCTTGTGAGGATGGTGCTCGCACTGAGCGGCATGAAAATTTATTCCAATGGCGGTTGAGATTGTTGAAGGCTGGTTACCGGCCGATTCAGCTGGGCCTGAATGCTTTCAAGCAGGCCAGCATGCTGCTAACTATGTTCTCTGGCGAAGGCTACAGGGTCGAAGAAAAACTGGGTTGCCTGACTCTTGGATGGCACTCACGCCCTCTGATCGCGGCTTCTGCATGGAAATGTGCATGA
Protein Sequence:
- >Pp3c19_8310V3.2.p|Physcomitrella_patens|GRAS|Pp3c19_8310V3.2.p
MAYQYSPGGSRWKPTGGTLVDGRLRHDKFTQASDAVQQLEELHTSLGSVSQDSLNIPAYYTLGSSSQAVSNCSTDLAGWIDCMIEELSSNTACPIMAPQQQHGLLEGSFLKNDHDASSCRDSLLETGSHRLSNVQFQDTSAARNKSSTAPHNGTSQVNAIRTTAAGLEQQLNKMGEDENNGIQLVHSLLACAESIQRGNLSFAEETLRRIELLSLPPGPMGKVATHFIGALTRRIYGVASSSGNNSSSNQSDSLLGLLHFYFYESCPFLRFAHFTANQAILEAVTGLKEVHVIDFNLMQGLQWPALIQALSLRQGGPPRLRLTGIGPPQPSGSDTLQEIGTKLAELAKTVRVDFEFRGVIAVKLDDIKPWMLQIRHGEAVAVNSVLQLHKLLYSAGPEAPIDAVLLLVRELKPKIFTIVEHEANHNQPSFLGRFIEALHYYSTMFDALEACNLPSENNEQVLIEMYLGREIYNIVACEDGARTERHENLFQWRLRLLKAGYRPIQLGLNAFKQASMLLTMFSGEGYRVEEKLGCLTLGWHSRPLIAASAWKCA*