Gene Details:
- Gene ID: PGSC0003DMP400020815
- Gene Family: GRAS Family
- Description: GRAS Family protein
- Species: Solanum tuberosum
- Source: GRAS family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: XP_006357876.1 — PREDICTED: scarecrow-like protein 23
- Swissprot: Q9FHZ1 — SCL23_ARATH; Scarecrow-like protein 23
- TrEMBL: M1AUK9 — M1AUK9_SOLTU; Uncharacterized protein
- STRING: PGSC0003DMT400030652 — (Solanum tuberosum)
Gene Ontology:
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0048366 — Biological Process — leaf development
- GO:0090610 — Biological Process — bundle sheath cell fate specification
- GO:0005634 — Cellular Component — nucleus
Family Introduction:
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature:
- GRAS proteins form a DNA binding complex to induce gene expression during nodulation signaling in Medicago truncatula. DOI: 10.1105/tpc.108.064501 ; PMID: 19252081
Sequences:
CDS Sequence:
- >PGSC0003DMP400020815|Solanum_tuberosum|GRAS|PGSC0003DMP400020815
ATGTCTTCTAAGCGCTCAATTGTTGAGTTTACTCCGGTCTCAGATGAACCTCAACTTCTTACTAAACGGCCCCGAAACGAGGAGGAAGAAGAAGAAGGTGAGGAGTTAGTTCTCGTTGACGCCGATTCCATCGGCCTTCGCCTTCTCGGCTTGCTCCTCCAATGCGCTGAGTTTGTTGCCATGGAGAATCTCGATGAAGCCGCTAATTTATTACCGGAAATCGCTGAGCTTTCATCGCCGTTCGGCTCATCGGCTGAGCGAGTCGCTGCTTACTTCGCTGAATCTCTATCGGCCAGAATCATCAGTTCTCATCTCCGATTTTATTCTCCGCTTAACCTCAAATCCCTAACTCTCACACATTCCCAAAAACTCTTCACCGCTCTGCAATCTTACAATACAATAAGCCCGCTCATCAAATTCTCTCACTACACAGCTAATCAAGCTATTTACCAAGCATTAGAAGGTGAAGATCACGTCCACGTCATCGATCTCGACATCATGCAAGGTCTTCAATGGCCAGGATTGTTCCAAATCCTCTCCTCTCGATCGAGAAAGCTCCGTTCCATCAAAATCACCGGCGTCGGATCCTCCATGGAATTACTCGAATCCACCGGCCGTAGACTCACCGAATTCGCCAACTCATTCGGACTTCCGTTCGAGTTTCAACCGTTTGAAGGCAAAATCGGACACATCACAGACCTGAATCAACTCGGAGTCAAAATTGGGGAAACTACAGTTGTCAATTGGATGCACCATTGCCTGTACGATATCACAGGGAGTGATTTAGGTACGTTCAGATTGTTAACTTTGTTAAGGCCGAAATTGATCACACTCGTTGAACAAGATCTGAGTCACGGAGGAAACTTTTTGGGCCGATTCGTTGAGGCATTGCATTATTACTCAGCCTTGTTTGATGCATTAGGGGATGGATTGAGTGAAGAGAGTGTAGAGAGGCATACGGTGGAACAGCAGTTGTTCAGTAGCGAAATTAGGAATATTGTAGCAGTAGGTGGGCCCAAGAGGACCGGGGAAGTACCCGTAGAGCGATGGGGCGTTGAAATGAAACGAATCGGGTTTTTACCCGTTTCGTTATCGGGTACTCCAGCTGCTCAAGCAAGTTTATTGTTAGGGATGTTTCCGAGAGGGTATACTTTGGTCGACGAAAATGGGTGTTTGAAATTGGGATGGAAGGATTTATCTTTGTTGACTGCATCTGCATGGCAACCATGCGATTAA
Protein Sequence:
- >PGSC0003DMP400020815|Solanum_tuberosum|GRAS|PGSC0003DMP400020815
MSSKRSIVEFTPVSDEPQLLTKRPRNEEEEEEGEELVLVDADSIGLRLLGLLLQCAEFVAMENLDEAANLLPEIAELSSPFGSSAERVAAYFAESLSARIISSHLRFYSPLNLKSLTLTHSQKLFTALQSYNTISPLIKFSHYTANQAIYQALEGEDHVHVIDLDIMQGLQWPGLFQILSSRSRKLRSIKITGVGSSMELLESTGRRLTEFANSFGLPFEFQPFEGKIGHITDLNQLGVKIGETTVVNWMHHCLYDITGSDLGTFRLLTLLRPKLITLVEQDLSHGGNFLGRFVEALHYYSALFDALGDGLSEESVERHTVEQQLFSSEIRNIVAVGGPKRTGEVPVERWGVEMKRIGFLPVSLSGTPAAQASLLLGMFPRGYTLVDENGCLKLGWKDLSLLTASAWQPCD*