Information report for orange1.1g007284m
Gene Details
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Functional Annotation
- Refseq: XP_006428037.1 — scarecrow-like protein 15
- Refseq: XP_006493843.1 — scarecrow-like protein 15
- TrEMBL: A0A067F8W6 — A0A067F8W6_CITSI; Uncharacterized protein
- STRING: XP_006493843.1 — (Citrus sinensis)
- STRING: XP_006428037.1 — (Citrus clementina)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0030154 — Biological Process — cell differentiation
- GO:0048831 — Biological Process — regulation of shoot system development
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Cicer arietinum: XP_004509243.1
- Cucumis melo: MELO3C017548P1
- Cucumis sativus: Cucsa.201250.1
- Fragaria vesca: mrna29558.1-v1.0-hybrid
- Glycine max: Glyma.02G058700.1.p
- Gossypium arboreum: Cotton_A_01631_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A02G1564, Gh_D03G0160
- Juglans regia: WALNUT_00005068-RA
- Malus domestica: MDP0000139971
- Medicago truncatula: Medtr8g077940.1
- Populus trichocarpa: Potri.007G029200.1, Potri.005G125800.1
- Prunus mume: XP_008241642.1
- Prunus persica: Prupe.7G150900.1.p
- Ricinus communis: 29646.m001070
Sequences
CDS Sequence:
- >orange1.1g007284m|Citrus_sinensis|GRAS|orange1.1g007284m
ATGAGAGTTCCCCTAAAATCTCAACAAAACAGCCAATCCCAGCAGAGCCCAGAACGTGTTTCTTCTCCAAACAACAACAACATCAACATCATCAACAGCGTCAACGTCATAGCAAGAAGCATCGGCGGTGTTAGTAATAATAATAATAATAACATTCACAGCCGTCGTCCCAATACCACCAATAATATAAATATTACTAGCCCAGTGAACAGCGGCAGCAAGTGCTATGAACCCACATCGGTTCTTGAACTTCGCCGGAGTCCGAGCCCTATACCTGAGTGGGACAGGGACGAGCATATGCTGCGTACCATGGACTGGGAATCTTTCATCAAGGACCTCGGCGGCTTAGATGACGACTGCTCTTCCGATGTTGCTGCTCCACAGCTACAAATTCAACACCTCCACCCGATCAGTACTGATGATGATTCCATTGATCATCAGCAGCAATCTGATTTTAATTTCAATTTTAGTTCTAATTTCAATGTTCCAGCAGCTGACGACGTCGTTTCCTTATCATCATCGACAACTCAATATCATAATAACTTCCCTGATCATCATCCTGATGCAGTTTCTAACAACGACAACAATATGATCGTCGTGAATAACCTGGGCGGAGGGTTTGAATTTGATTATAATTATATAGAAGAGCTTATCAGAGCTGCAGAGTGCCTCGACTCGAACGAGTTACAAGTGGCTCAGATGATATTGGCCCGCCTCAATCACAGTCAAAACCTAGTAGGTTCACCACCAGTAGTAGTTGCTGCAGGGAAGCCGCTCCAAAGAGCCGCGATCTTTTTCAAAGAAGCTCTCAGCTCACTCCTCCTCAGCCTGCTCAACGGGTTAACTCGGCCGACAAGTCATCTCTCGTCATCTTGGCCAGAGATCATTCAATCTGTCAGAGCTTACAAGGCCTTCACTGCGATCTCACCCATCCCCATGTTCACTCACTTCATAACCACTCAAGCCCTCCTCGAATCCCTCTTCCTCGACCGCGGATCGGGATCGCCACCGTTGATTCACGTCATAGACTTTGACATCGGTTTCGGCGGCCAGTACGCTTCTTTCATGAGAGAAATAGCCGACAAAGCAGCGGCTGCCCGTCACTCTAACTACTCAACTTCACTTCGCATCACGGCTGTTGTTCCCGATGATTACGTCACCGAGACAAGACTCGTCAAAGCCAACCTCGTTCAGTTCGCGCGAGAACTCAGGATAGGGCTCCACGTGGACTTCGTGCCCGCACGGTCGTTCGAGATGTTGTCTTTCAAAGCGGTTAAGTTAATGGACGGTGAGAAATTAGCTGTCGTCTTATCTCCAACTGTATTTCGCCGTCTGGGTGGAAATTCAACTGACAACGCTGCGGCTGTCGCGGCTTTTGTCACGGATATCCGCAGAATTTCTCCAAACGTCGTCGTTTTTACTGACAATGAAGCGTGGGGGGACTTTGGGAGTGGGACGACGGCCCCGTTTTCGTTTCGGAGGAACTTCGTCACCAGCCTTGAGTATTACACGATGGTGTTTGAATCACTCGATGCTGCTGCGGCTGCGATGAATGCCGGAGACTGGGCGAGGAAGATTGAAACGCATTTGCTTCGGCCGAAGATTATGGCGGCTGTTGAGGTGGCGGGGAGGCGCGTGGCGCCGTGGAGAGAGGTGTTTTCCGGCGCGGGGATGAGGCCAGTTCAGCTGAGCCAATTTGCCGATTTTCTGGCAGAATGTTTGCTTGCCAAGGTCCAGGTGGGTGGGTTCCACGTGGCGAAACGGCAGGCTGAATTGGTGCTCTGCTGGCATCATTGGGCCCTTGTCGCCACGTCAGCTTGGAGGTGTTAG
Protein Sequence:
- >orange1.1g007284m|Citrus_sinensis|GRAS|orange1.1g007284m
MRVPLKSQQNSQSQQSPERVSSPNNNNINIINSVNVIARSIGGVSNNNNNNIHSRRPNTTNNINITSPVNSGSKCYEPTSVLELRRSPSPIPEWDRDEHMLRTMDWESFIKDLGGLDDDCSSDVAAPQLQIQHLHPISTDDDSIDHQQQSDFNFNFSSNFNVPAADDVVSLSSSTTQYHNNFPDHHPDAVSNNDNNMIVVNNLGGGFEFDYNYIEELIRAAECLDSNELQVAQMILARLNHSQNLVGSPPVVVAAGKPLQRAAIFFKEALSSLLLSLLNGLTRPTSHLSSSWPEIIQSVRAYKAFTAISPIPMFTHFITTQALLESLFLDRGSGSPPLIHVIDFDIGFGGQYASFMREIADKAAAARHSNYSTSLRITAVVPDDYVTETRLVKANLVQFARELRIGLHVDFVPARSFEMLSFKAVKLMDGEKLAVVLSPTVFRRLGGNSTDNAAAVAAFVTDIRRISPNVVVFTDNEAWGDFGSGTTAPFSFRRNFVTSLEYYTMVFESLDAAAAAMNAGDWARKIETHLLRPKIMAAVEVAGRRVAPWREVFSGAGMRPVQLSQFADFLAECLLAKVQVGGFHVAKRQAELVLCWHHWALVATSAWRC*