Information report for MDP0000243351
Gene Details
|
|
Functional Annotation
- Refseq: XP_018828642.1 — PREDICTED: scarecrow-like protein 28 isoform X1
- Swissprot: Q9CAN3 — SCL28_ARATH; Scarecrow-like protein 28
- TrEMBL: A0A2I4FAG5 — A0A2I4FAG5_JUGRE; scarecrow-like protein 28 isoform X1
- STRING: cassava4.1_003118m — (Manihot esculenta)
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Capsicum annuum: CA01g03260
- Daucus carota: DCAR_008419
- Fragaria vesca: mrna32389.1-v1.0-hybrid
- Juglans regia: WALNUT_00007210-RA
- Manihot esculenta: Manes.02G027000.1.p, Manes.01G066400.1.p
- Nicotiana benthamiana: Niben101Scf07391g00013.1
- Nicotiana tabacum: XP_016469427.1
- Pyrus bretschneideri: Pbr030739.1, Pbr037212.1
- Sesamum indicum: XP_011072178.1
- Solanum lycopersicum: Solyc08g080400.1.1
- Solanum melongena: Sme2.5_01687.1_g00003.1
- Solanum tuberosum: PGSC0003DMP400005474
Sequences
CDS Sequence:
- >MDP0000243351|Malus_domestica|GRAS|MDP0000243351
ATGTTGGCTGGTTGCTCTAGTTCCACATTGTTGTCACCAAGGCATAGATTGAGGAGTGAAGCAGCAGCCCAGTTACAAGCTTGCAGTTTCCAGCTACCATCGATGAGCACGCAGAGATTGGACTTACCATGCAGTTTTCCCCGCAAGGACACTTCAAGGTCRCAACCCATTAGGCCTGTGGGGCTTTCAGTTGAGAAATCGATCGATTCGAAGGTGGGGAGTTGTTCCCTGAAGCAGAGCATTCGGCTGCCTCCTCTGGCTACAACCGGTCCTGTGTCGGCAACGGCGGAGTTTGTGGAGGCGGGGAAGGAGAATCGTGATCAGTTTTCGGGGGAGAAGAAGAGAGGGAAGAGGTTCGCAGAGCCGGTGGATGATGATGAGTCTTGCAGAAACAGGGCAAAGAGGAAAAGGGGTTGTGGGGATAATGGCGGTGGCGATGAAGGCGGCGGTGGTTTGAGTTTAGGCCAATTGGGTGGTGGGAATTTTTGGTTTCAGCCTGGTTTCCAACTCCCTCCGCCGACGACTCAGCTTCCGTTTTCTCTGACATGTTCAGGGGATGACGAGAGGGTTTGTTATGTTCCGGGGGAGGCGATTTCGCAGCCTCTACCATTGTCAAACAGTCCTTGGTTGGACTCAATTGTGACTGAGATAACTGACTTAGGTAAGAAGGATGGAGGTGGGGAGGCTAGCCGTGGACTGGTGTGGGAAGAGTCAGCCGCGTCGAGTACTTCATCAGAGAGCCAGAGCTTGGCATTGAGTGTAAATGAGAGTGCCTCGGAACACGAAGCGGGCAACGGGACTAGGAATCCTTATGTCCCACATGGAGGAGCATGGGTTGTGGCAGAAGAGGATGATGATGATGATGATGAGAGTGAAGCAGAGCATATAGGGTTTGAGCTTATCAACGCTCCTCGAGAGTTTGATCGAAGGGACGAGGACTATGGGATTGCGGTAAGGCTTCTAAACCAGTTTAGCCCAATTCCAAAGTTTGTTCATTTCACTTCAAATGAGATACTGCTGAGAGCTTTTGAAGGGAAGGACAGGGTTCACATCATAGATTTCGACATCAAGCAAGGGCTGCAGTGGCCTAGATCACAGGGGATAGGGGAGTCGAAGCAAGAGCTCAATGAGACGAGAGATAGGCTTGCTGGATTTGCTGGGGCACTGAATCTGCCTTTCGAGTTTCACCCGGTTGTGGATAGGTTGGAGGATGTGAGGGTTTGGATGCTTCATGTCAAGGAGCATGAGAGTGTGGCTGTGAATTGTGTTTTCCAACTGCACAAAACACTTTATGACATGACAGGAGGAGCGCTGAGGGATTTCTTAGGACTCATTCGAAGTACAAACCCAACAATAGTTCTTATGGCAGAGCAAGAGGCTGAGCACAATGAGGCTAGGCTGGAGACAAGAGTTTCCAACTCATTGAAGTACTATTCTGCTATATTTGACTCGATTGGTTCTAGCCTTCCCTTGGGGAGCCAGGCCAGGATCAAAGTAGAGGAGATGTTTGCGCGAGAGATTAGGAACATCGTTGCTTGTGAAGGAAGTGATAGGTTGGAGAGGCACGAGAGCTTTGAGAAGTGGAGAAAGTGGATGGAGCAAGGAGGGTTTCGATGCGCAGGGATAACGGAGAGGGAAATGCTTCAGAGCCAGTTTCTGTTAAAGATGTATGCCAATGAGAGTTACGCCGTGAAGAAGCAAGAGCAAGACGGAGCAGCAGGGGCACTTACTCTAAGTTGGATGGATCGACCTCTTTACACAGTCTCAGCATGGACAACAGTTGATGTAGCAGGCAGCTCGTCATCATTTTCGAAACCAAGTTAA
Protein Sequence:
- >MDP0000243351|Malus_domestica|GRAS|MDP0000243351
MLAGCSSSTLLSPRHRLRSEAAAQLQACSFQLPSMSTQRLDLPCSFPRKDTSRSQPIRPVGLSVEKSIDSKVGSCSLKQSIRLPPLATTGPVSATAEFVEAGKENRDQFSGEKKRGKRFAEPVDDDESCRNRAKRKRGCGDNGGGDEGGGGLSLGQLGGGNFWFQPGFQLPPPTTQLPFSLTCSGDDERVCYVPGEAISQPLPLSNSPWLDSIVTEITDLGKKDGGGEASRGLVWEESAASSTSSESQSLALSVNESASEHEAGNGTRNPYVPHGGAWVVAEEDDDDDDESEAEHIGFELINAPREFDRRDEDYGIAVRLLNQFSPIPKFVHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPRSQGIGESKQELNETRDRLAGFAGALNLPFEFHPVVDRLEDVRVWMLHVKEHESVAVNCVFQLHKTLYDMTGGALRDFLGLIRSTNPTIVLMAEQEAEHNEARLETRVSNSLKYYSAIFDSIGSSLPLGSQARIKVEEMFAREIRNIVACEGSDRLERHESFEKWRKWMEQGGFRCAGITEREMLQSQFLLKMYANESYAVKKQEQDGAAGALTLSWMDRPLYTVSAWTTVDVAGSSSSFSKPS