Information report for Lsa019358
Gene Details
Functional Annotation
- Refseq: XP_023752070.1 — scarecrow-like protein 28
- Refseq: XP_023752071.1 — scarecrow-like protein 28
- Swissprot: Q9CAN3 — SCL28_ARATH; Scarecrow-like protein 28
- TrEMBL: A0A2J6M496 — A0A2J6M496_LACSA; Uncharacterized protein
- STRING: Gorai.008G243900.1 — (Gossypium raimondii)
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Actinidia chinensis: Achn132531, Achn002491
- Citrus sinensis: orange1.1g005954m
- Daucus carota: DCAR_008421
- Fragaria vesca: mrna32389.1-v1.0-hybrid
- Gossypium arboreum: Cotton_A_14441_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D12G2238, Gh_A12G2060
- Manihot esculenta: Manes.02G027000.1.p, Manes.01G066400.1.p
- Populus trichocarpa: Potri.003G122400.1, Potri.001G109400.1
- Prunus mume: XP_008238774.1
- Ricinus communis: 30190.m011131
- Sesamum indicum: XP_011072178.1
- Ziziphus jujuba: XP_015896272.1
Sequences
CDS Sequence:
- >Lsa019358|Lactuca_sativa|GRAS|gnl|UG|Lsa#S58696420;PUT-187a-Lactuca_sativa-27656
ATGTTGGCTGGGTGTTCTTCTTCTACATTTAGTAACTTCCCTTCAATGAGCACACAAAGATTGGATTTGCCATGCAATACTAACTTCCCTCGTAAAGAATCAACAAGATCGCAGCCAGTTATTAGACCTGTGGGCCCTATATCACTCGACAACAACAACAACAACAACAACACAATAGAAGCAAGAACAACCAACTGTTCACTTAAGCACACTGTGGTAGAAAAAAAGAACGATATCTGGGATAACAGAAACAAAGGGTTAAAAAGACTTTACCAAGATGAACAAGATGAATCTTTTCGAGCTAAGAGGAAAAGGGGTTGCAGTAAAGTCGAAGAATTTGGTGAAAATGAAGATAATTTTTGGTTCAGCAAACAGGGGTTCGTTCTTGATCATTCTGCTACTTCACTTCCATGGAGTTTTGTGAATGAATTAGCGGATTTAGGTGAAAGGGGAGTTTCTTCAGGAAGCCATAGACAGAGGGTTGTGAATGAAACGTCATCGGGGTCGGGATCGGGATCGAGGAGCAGTTCGCCGGAAAGTCATCGGAGTTTGGATGTAGGAGGTACGAACGGCGTAGGTGCACCAAACCCTAATCAAAGTTTGGATTTATTAGCGATTGGGAACACGAACCATGATGAAGAAGTTGGATTTGAGCTTATAAGTTTGCTTTTAGCTTGTTTGGAAGCAATCGGTGTTAAGAACATAGCTGCAATTAACCATTTCATTTCAAAATTAGGCGAATTAGCGTCTCCGAGAGGCGATTCTTCAATCTCCAGACTTGCTGCTTATTACACAGAAGCTTTAGCTTTAAGGGTTTCGAGAATTTGGCCGAATATTTTCCAGATTTCTATTCCTAGAGAGATTAATCAGGTCGAAGAAGAGAATGGGACAGCTTTACGTCTCTTGAATCAAGCAACCCCAATTCCTAAATTCATCCATTTCACGTCAAACGAGATTCTGCTAAGATCGTTTCAAGGGAAAGACAAAGTTCATGTTATAGATTTTGACGTAAAGCAAGGTCTTCAATGGCCGAGCTTTTTTCAGAGTTTAGCTTCCATGAACAACCCCCCGAGCCACGTCAGAATCACCGGCGTCGGAGAATCCAAACAGGATCTCATCGAGACGGGAGCTCGGCTTTCCGGATTCGCCGAGGCCTTAAACCTAGAATTTGAATTCCATCCGGTTGTTGATAGATTAGAAGATGTGAGACTGTGGATGCTTCATGTTAAAGAAGGCGAAACTGTAGCAGTAAATTGCGTCTTACAGCTTCACAAAATGCTGTACGACGCCACCGGCGGCGCTCTTAGAGACTTTTTCCGGCTAATTCGAAGCACAAACCCTAGCGTTGTGGTGATGGCGGAGCAAGAATCCGAGCATAACGACGCTGTTTTGGAAAAGAGAGTATCGAATTCATTGAAGTATTATTCTGCTATCTTTGACTGTATCGATTCTGTGTTTCCATTACAAAGTCATTCTCGGATCAAAATCGAAGAATCCTTCGGACGTGAAATCAGAAACATAATCGCGTGCGAAGGGCTTGAGAGATTCGAGAGGCACGTTGGGTTTGATCAGTGGTGGCGGTCGATGGCGGAGCTCGGCGGATTCAGAAGCGTGGAGATCAGCGAGAGGGAGTTTCTACAGAGCCAAATGATACTGAAAATGTATGATCATCCATTTGGTCCGAATTCCTTCAAAGTGGAGAAGCAGCAGCAGAGGCGGGTGTCTGATGGCGGTGCCACCGCCGGTGTTACTCTGAGCTGGTCTGATCAGCCTCTTTACACCGTGTCGGCGTGGGTCCCGTCGGATGTCGCCGGAAGTTCGTCGGCGTTTCAGCAAGCAGCAGCGTGA
Protein Sequence:
- >Lsa019358|Lactuca_sativa|GRAS|gnl|UG|Lsa#S58696420;PUT-187a-Lactuca_sativa-27656
MLAGCSSSTFSNFPSMSTQRLDLPCNTNFPRKESTRSQPVIRPVGPISLDNNNNNNNTIEARTTNCSLKHTVVEKKNDIWDNRNKGLKRLYQDEQDESFRAKRKRGCSKVEEFGENEDNFWFSKQGFVLDHSATSLPWSFVNELADLGERGVSSGSHRQRVVNETSSGSGSGSRSSSPESHRSLDVGGTNGVGAPNPNQSLDLLAIGNTNHDEEVGFELISLLLACLEAIGVKNIAAINHFISKLGELASPRGDSSISRLAAYYTEALALRVSRIWPNIFQISIPREINQVEEENGTALRLLNQATPIPKFIHFTSNEILLRSFQGKDKVHVIDFDVKQGLQWPSFFQSLASMNNPPSHVRITGVGESKQDLIETGARLSGFAEALNLEFEFHPVVDRLEDVRLWMLHVKEGETVAVNCVLQLHKMLYDATGGALRDFFRLIRSTNPSVVVMAEQESEHNDAVLEKRVSNSLKYYSAIFDCIDSVFPLQSHSRIKIEESFGREIRNIIACEGLERFERHVGFDQWWRSMAELGGFRSVEISEREFLQSQMILKMYDHPFGPNSFKVEKQQQRRVSDGGATAGVTLSWSDQPLYTVSAWVPSDVAGSSSAFQQAAA