Gene Details:
- Gene ID: EcC054968.20
- Gene Family: GRAS Family
- Description: GRAS Family protein
- Species: Eucalyptus camaldulensis
- Source: GRAS family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: XP_010063084.1 — PREDICTED: scarecrow-like protein 21
- Refseq: XP_010063085.1 — PREDICTED: scarecrow-like protein 21
- Refseq: XP_010063086.1 — PREDICTED: scarecrow-like protein 21
- Swissprot: Q9LDL7 — PAT1_ARATH; Scarecrow-like transcription factor PAT1
- TrEMBL: A0A059BW96 — A0A059BW96_EUCGR; Uncharacterized protein
- STRING: XP_010063084.1 — (Eucalyptus grandis)
Gene Ontology:
- GO:0006457 — Biological Process — protein folding
- GO:0009611 — Biological Process — response to wounding
- GO:0009961 — Biological Process — response to 1-aminocyclopropane-1-carboxylic acid
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0003690 — Molecular Function — double-stranded DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005507 — Molecular Function — copper ion binding
- GO:0005524 — Molecular Function — ATP binding
- GO:0016491 — Molecular Function — oxidoreductase activity
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0051082 — Molecular Function — unfolded protein binding
Family Introduction:
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature:
- GRAS proteins form a DNA binding complex to induce gene expression during nodulation signaling in Medicago truncatula. DOI: 10.1105/tpc.108.064501 ; PMID: 19252081
Sequences:
CDS Sequence:
- >EcC054968.20|Eucalyptus_camaldulensis|GRAS|EcC054968.20
ATGCAAGCTTCACAAAAGCCAAGATTATGGGATGCTTCAGACAGGTTCTACAACCTGCCCGCAAAAGAGCTCGAGTCTTCTCATTGGTCTTCGATCACAAACTTTGACCATCTCTCATGCTCCGATGAGAGCAGCCAAGGGAATTGTATGCTCGAATCATCCTCGGGAAGTGCACCTTATCATGTAAATGATTCCCCGTCAACTGTGAGATTTTCACCTGATGGAAGTCCCAGAGCAAAACGAGCATCAGTGCCTGATTCTTCTGCACAAGACCATCTGAATGACCTCGAACTAAAAGTGCGAGAACTGGAAACTGTCATGCTAGGACCCAGCTCAGATATGCCCCACACGGTTGATATCAACTCCTTGGTTGAATCTGGCCAGATGTCTCAGGAGACGGAGACATTGATGGAGATTATCTCCAGGAGGGACCTAAAGGAGATTCTCTGTGCTTGTGCTAAAGCAGTTGAAGACAACGACACCTTAAAAATTGAGTGTTTAATATCAGAGTTACGCCCGATGGTGTCTGTTTCCGGTGACCCGATCCAACGATTATCAGCATACATGTTGGAAGGGCTCATAGCAAGATTGGCATGTTCGGGAAGCTCTATTTACAAAGCTTTAAAGTGCAAAGAGCCTGCTGGTGCAGAGCTGCTGTCGTACATGCACATTCTCTATGATATATGTCCTTATTTCAAGTTTGGGTACATGTCGGCGAATGGATCAATCGCAGAAGTCATGAAGGACGAAAACAGTATCCATATAATCGATTTTCAGATTGCTCAGGGAGGCCAGTGGATCACCCTGATTCAGGCTCTTGCAGCACGGCCCGGTGGGCCACCCTGTATCCGAATAACTGGGATCGACGATTCAGGATCTGCTTATGCCCGTGGAGGAGGCCTGGAAATCGTCGGCCAGAGGTTGTCTAGACTTGCTGAAGCCTGCAGGGTACCATTTCAGTTCCATGCTTGTGGAGTTCCCGCTTCAGAGGTTGGAATTGGAAACCTGCTGATTCGAGCTGACGAGGCAATAGCCGTAAATTTTCCCCTCCTGTTGCATCACATACCAGATGAGAGCGTCTGTTCGCAGAATCACCGTGATAGGCTTATAAGGATGGCTAAGAGCTTGTCCCCGAAAGTTGTCACTCTTGTTGAGCAAGAATCAAACACGAACACTGCCCCATTCTTCCTGCGTTTCCTTGAGACGCTTAACTACTATTCGTCAGTATTCGAATCCATTGACGTGGCTCTGCCAAGGGAGCACAAGGAGCGGGTCAATGTCGAGCAGCATTGCCTTGCTCGGGATATTGTTAACCTGATTGCATGCGAGGGGATGGAGAGAGTTGAGCGTCATGAGTTGCTTGGAAAGTGGAGAATGCGGTTCATCATGGCTGGTTTTAGTCCATACCCTTTAAGTTCCTTTGTGAATGCTACGATCAAGAGCTTGCTGTCGAGTTACTGCGACAAGTATACACTAGAGGAGAGAGACGGGGCTCTGTACCTTGGCTGGATGAACCGCCCTCTTGTTGCTTCTTGTGCATGGAGGTGA
Protein Sequence:
- >EcC054968.20|Eucalyptus_camaldulensis|GRAS|EcC054968.20
MQASQKPRLWDASDRFYNLPAKELESSHWSSITNFDHLSCSDESSQGNCMLESSSGSAPYHVNDSPSTVRFSPDGSPRAKRASVPDSSAQDHLNDLELKVRELETVMLGPSSDMPHTVDINSLVESGQMSQETETLMEIISRRDLKEILCACAKAVEDNDTLKIECLISELRPMVSVSGDPIQRLSAYMLEGLIARLACSGSSIYKALKCKEPAGAELLSYMHILYDICPYFKFGYMSANGSIAEVMKDENSIHIIDFQIAQGGQWITLIQALAARPGGPPCIRITGIDDSGSAYARGGGLEIVGQRLSRLAEACRVPFQFHACGVPASEVGIGNLLIRADEAIAVNFPLLLHHIPDESVCSQNHRDRLIRMAKSLSPKVVTLVEQESNTNTAPFFLRFLETLNYYSSVFESIDVALPREHKERVNVEQHCLARDIVNLIACEGMERVERHELLGKWRMRFIMAGFSPYPLSSFVNATIKSLLSSYCDKYTLEERDGALYLGWMNRPLVASCAWR