Gene Details:

  • Gene ID: Cagra.2098s0043.1.p
  • Gene Family: GRAS Family
  • Description: GRAS Family protein
  • Species: Capsella grandiflora
  • Source: GRAS family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_006299072.1  — DELLA protein RGL2
  • Swissprot:  Q8GXW1  — RGL2_ARATH; DELLA protein RGL2
  • TrEMBL:  R0I257  — R0I257_9BRAS; Uncharacterized protein
  • STRING:  Cagra.2098s0043.1.p  — (Capsella grandiflora)

Gene Ontology:

  • GO:0009723  — Biological Process — response to ethylene
  • GO:0009737  — Biological Process — response to abscisic acid
  • GO:0009739  — Biological Process — response to gibberellin
  • GO:0009863  — Biological Process — salicylic acid mediated signaling pathway
  • GO:0009867  — Biological Process — jasmonic acid mediated signaling pathway
  • GO:0010187  — Biological Process — negative regulation of seed germination
  • GO:0042538  — Biological Process — hyperosmotic salinity response
  • GO:2000033  — Biological Process — regulation of seed dormancy process
  • GO:2000377  — Biological Process — regulation of reactive oxygen species metabolic process
  • GO:0005634  — Cellular Component — nucleus

Family Introduction:

  • The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).

Literature:

Sequences:

CDS Sequence:
  • >Cagra.2098s0043.1.p|Capsella_grandiflora|GRAS|Cagra.2098s0043.1.p
    ATGAAGAGAGGACATGGCGAAACAACTTGGGACCCGCCACCTTCTCGCTGTTCCGGTGAAGGTCCTTCAATGGCGGTGGTCGTGGATAACAACAACAAGAAGTCTACTGCTGATGACAACAACAACAACATGGACGATGAGCTTCTTGCTGTTCTTGGCTACAAGGTTCGATCTTCTGAGATGGCTGAAGTCGCACAGAAGCTTGAGCAGCTCGAGATGGTTTTGTCTAACGATGACGTTGGCTCTACTGTCTTAAACGACACTGTTCATTACAACCCATCTGATCTCTCTAACTGGGTCGAGACCATGCTCTCCGAGCTTAACAACCCAGCTTCTTCCGATCTCGACCCGACCCGAACTTGTGTAGATAGATCCGAATACGATCTCAGGGCTATTCCTGGCCTCTCTGCGTTTCCAAAGGAAGAACAACAAGTCTTTGACGACGAAGAAGCTAGCAGCAAGAGGATCCGACTTGGAGAACCCTATTGCGAGTCAGCGGGTGAGTCAACTCGTTCTGTGGTGCTCGTTGACTCTCAAGAGACCGGAGTCAGACTCGTCCACGCGCTTGTGGCGTGCGCTGAGGCGGTCCAGCAGGAGAATCTCAGCTTAGCCGACGCGCTCGTGAAACGCGTGGGAACACTCGCAGCTTCTCAAGCCGGAGCCATGGGCAAAGTCGCTTCCTATTTCTCCCAAGCCCTGGCTCGTCGGATTTACCATGGTTACAACGCGGCGGAGACGGACGGCTCACTCGAAGAGGTTCTTCAGATGCACTTCTACGAGTCTTGCCCTTACCTCAAATTCGCTCACTTCACGGCCAACCAAGCCATACTCGAAGCTGTCACGACGTCCCGTAGAGTTCACGTCATCGATTTAGGGCTTAATCAAGGGATGCAATGGCCTGCTTTGATGCAAGCCTTAGCTCTCCGACCCGGTGGACCTCCGTCGTTTCGTCTCACCGGAGTCGGACCACCGCAGACCGAGAATTCGGATTCCCTTCAACAGTTAGGTTGGAAATTAGCTCAATTCGCTCAGAACATCGGCGTCGAATTCGAATTCAAAGGCTTAGCCGCTGAGAGTTTATCGGATCTAGAACCGGAAATGTTCGAAACCCGACCCGAATCAGAAACCGTTGTGGTTAATTCGGTATTTGAGCTCCACCGGTTATTAGCTCGATCCGGTTCAGTCGAAAAGCTTCTCGATACGGTTAAGGCTGTTAAACCGAGTATTGTGACGGTGGTCGAGCAAGAAGCGAACCACAACGGAGTCGTCTTCCTCGATAGGTTCAACGAAGCGCTTCATTACTACTCGAGCCTTTTCGACTCGCTGGAAGACAGTTACAGTCTACCGAGTCAAGACCGAGTTATGTCGGAGGTGTATTTAGGGAGACAGATACTCAACGTAGTTGCGGCGGAAGGGTACGATCGGGTGGAGCGACACGAGACGTTCCCACAGTGGAAAAACCGGATGAGATCCGGTGGATTTGACCCGGTTAATCTCGGATCTAGCTCGTATAAACAAGCGAGCATGCTCTTATCGGTGTTTGCTACGGGAGATGGATACAGAGTTGAAGAAAACGACGGTTGTCTAATGCTTGGGTGGCAGACAAGACCGCTCATCACAACGTCGGCGTGGAAACTCGCTGAGTCGCGGCGGTAG
Protein Sequence:
  • >Cagra.2098s0043.1.p|Capsella_grandiflora|GRAS|Cagra.2098s0043.1.p
    MKRGHGETTWDPPPSRCSGEGPSMAVVVDNNNKKSTADDNNNNMDDELLAVLGYKVRSSEMAEVAQKLEQLEMVLSNDDVGSTVLNDTVHYNPSDLSNWVETMLSELNNPASSDLDPTRTCVDRSEYDLRAIPGLSAFPKEEQQVFDDEEASSKRIRLGEPYCESAGESTRSVVLVDSQETGVRLVHALVACAEAVQQENLSLADALVKRVGTLAASQAGAMGKVASYFSQALARRIYHGYNAAETDGSLEEVLQMHFYESCPYLKFAHFTANQAILEAVTTSRRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGPPQTENSDSLQQLGWKLAQFAQNIGVEFEFKGLAAESLSDLEPEMFETRPESETVVVNSVFELHRLLARSGSVEKLLDTVKAVKPSIVTVVEQEANHNGVVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAAEGYDRVERHETFPQWKNRMRSGGFDPVNLGSSSYKQASMLLSVFATGDGYRVEENDGCLMLGWQTRPLITTSAWKLAESRR*