Information report for CA06g07510
Gene Details
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Functional Annotation
- Refseq: XP_016553928.1 — PREDICTED: scarecrow-like protein 8
- TrEMBL: A0A1U8F3A0 — A0A1U8F3A0_CAPAN; Uncharacterized protein
- TrEMBL: A0A2G2Z8T7 — A0A2G2Z8T7_CAPAN; scarecrow-like protein 8
- STRING: PGSC0003DMT400076932 — (Solanum tuberosum)
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Actinidia chinensis: Achn188081, Achn011651
- Gossypium arboreum: Cotton_A_02423_BGI-A2_v1.0
- Nicotiana benthamiana: Niben101Scf00864g01003.1
- Nicotiana tabacum: XP_016469679.1, XP_016469678.1, XP_016486360.1
- Petunia inflata: Peinf101Scf02695g01003.1, Peinf101Scf00061g04007.1
- Sesamum indicum: XP_011076123.1
- Solanum lycopersicum: Solyc06g036170.1.1, Solyc03g025170.1.1
- Solanum melongena: Sme2.5_01913.1_g00001.1, Sme2.5_01746.1_g00005.1
- Solanum tuberosum: PGSC0003DMP400052127, PGSC0003DMP400052126, PGSC0003DMP400017925
Sequences
CDS Sequence:
- >CA06g07510|Capsicum_annuum|GRAS|CA06g07510
ATGTCCTCCGATTACTCTGGTGGAATTCCAGACTTTTACGGCGGCGCCGGTGGGATCAACACCGGAAGATCCACCATGATTCCGATGAACCACGCCCAGCGTTCACCGCTTTCTGGGATCCTCCCCGAAGGTGCTTACCAGAACCTCCACCGGAGACAGACTTTCATCGGCAAACGATCACTTGCCGATTTTCAACAGCAGCAGCAGCAAGTGCAACAAGGTTTGGGATTTTATCTTCGTAACGTTAAGCCTAGAAGTTACCAGCAAGCATCTCCAATTTCTCCTCTGGTAGATTTCTCATCTGAATTTCCTTCGGTTTCTCCGATTTCGGTGATGAATACACGCCATGCCCTCCCAATTATTCAAACGCTCCGTTCACAACCTGTTATTCCACCGGCAAACACCAACGCTAGCGAGGTTCTATCTTCTGGTAACCTGAATTGTTCTGCAGTTGCTTCTTACTTAAATCAGGTTCAGAACAGTTTGTACCAGGAATCAGAGGAAAAAATGATGAATCGATTGCAAGAGTTAGAGAAAGAGCTTCTAGAAGACAGTTATGGGGACGAGGAAGATACAGGGTCTATTGTGACGAACAACAACGAGTGGTCGGAAACAATAAAGAATCTGATTACTCCGAGTAGCAACCACCTATCTCCGGCATCATCTACATCTTCGTGTTCTTCTTCGATTGAATCTCCAACAATAACTTCTCCAAAGCAGTCTATTGTTGCGGCTGCTACCGCAATAACCGACGGGAAAACCAATGTTGCAGTGGATATCCTCACGCGCCTCTCACAGGTCGCTGATATTAGAGGTTCTTCCGAACAGCGGTTGACGGCGTATATGGTTTCGGCTCTTAAGTCGCGCGTGAACTTCACGGAGTACCCACCGCCCGTGTTGGAGCTGCAGAGCAAAGAGCACGCAATTTCTGCTCAAAATCTCTACGAGTTGTCCCCGTGTTTTAAGCTTGGATTCATGGCAGCTAATTTAGCTATTCTTGAAGCTGTAGTTGATCAACCTTCAGACAAGATTCACGTAATTGATTTCGATATAGGACAAGGTGGACAATACTTGCATTTACTACACGCGCTAGCTAGCAAGAAAACTGATGAGCCTACCAGCTTAAAAATCACGGCGATCACAGATTTCATGGGCAGAGCTGACGACAGAGTAAACCTCATTGGAGATGATCTGAGAACTCTAGCAGACAAAATCGGCGTTTGTTTGGTTTTCAACGTGACTTCGTGTAAAATTACGGATTTGAGTAGGGAGAGATTGGGGGTTGAACATGACGAGACTTTAGCAGTGAATTTTGCATACAGATTATACAGATTGCCCGACGAGAGCGTAACAACGGAGAATCTAAGAGATGAGCTTCTCCGGAGAGTGAAGGGGTTATCACCAAAGGTGGTGACATTAGTAGAGCAAGAGCTGAATGGAAATACGGCGGCGTTTGTAGCGCGTGTAAATGAGACGTATGGGTATTACGGAGCGTTGTTGGATTCACTGGACGCAACCGTATCAAAGGATGAAATGGGCCGGGCCAAGATCGAAGAAGGATTGAGTCGGAAAGTGGTGAACTCAGTGGCGTGTGAAGGGAGAGATCGCGTGGAGAGATGTGAGGTGTTTGGTAAATGGAGGGCCCGAATGAGTATGGCTGGGTTCGGGCCAAGGCCCATGAGTCAATACATCGCTGATTCACTGCTTAAGAGGCTAAATTCGGATCCACGTGGCAATCCGGGATTCACTGTAAATGAACAAAGTGGAGGTATTTGCTTTGGATGGATGGGAAAAACCCTCATCGTTGCTTCTGCTTGGAGTTAA
Protein Sequence:
- >CA06g07510|Capsicum_annuum|GRAS|CA06g07510
MSSDYSGGIPDFYGGAGGINTGRSTMIPMNHAQRSPLSGILPEGAYQNLHRRQTFIGKRSLADFQQQQQQVQQGLGFYLRNVKPRSYQQASPISPLVDFSSEFPSVSPISVMNTRHALPIIQTLRSQPVIPPANTNASEVLSSGNLNCSAVASYLNQVQNSLYQESEEKMMNRLQELEKELLEDSYGDEEDTGSIVTNNNEWSETIKNLITPSSNHLSPASSTSSCSSSIESPTITSPKQSIVAAATAITDGKTNVAVDILTRLSQVADIRGSSEQRLTAYMVSALKSRVNFTEYPPPVLELQSKEHAISAQNLYELSPCFKLGFMAANLAILEAVVDQPSDKIHVIDFDIGQGGQYLHLLHALASKKTDEPTSLKITAITDFMGRADDRVNLIGDDLRTLADKIGVCLVFNVTSCKITDLSRERLGVEHDETLAVNFAYRLYRLPDESVTTENLRDELLRRVKGLSPKVVTLVEQELNGNTAAFVARVNETYGYYGALLDSLDATVSKDEMGRAKIEEGLSRKVVNSVACEGRDRVERCEVFGKWRARMSMAGFGPRPMSQYIADSLLKRLNSDPRGNPGFTVNEQSGGICFGWMGKTLIVASAWS*