Information report for CA02g22940
Gene Details
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Functional Annotation
- Refseq: XP_016560585.1 — PREDICTED: scarecrow-like protein 15
- Swissprot: O23210 — SCL15_ARATH; Scarecrow-like protein 15
- TrEMBL: A0A2G3AAH7 — A0A2G3AAH7_CAPAN; Scarecrow-like protein 15
- TrEMBL: A0A2G3D7Q6 — A0A2G3D7Q6_CAPCH; Scarecrow-like protein 15
- STRING: PGSC0003DMT400033037 — (Solanum tuberosum)
- GO:0030154 — Biological Process — cell differentiation
- GO:0048831 — Biological Process — regulation of shoot system development
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Daucus carota: DCAR_017238
- Fragaria vesca: mrna29558.1-v1.0-hybrid
- Juglans regia: WALNUT_00005068-RA
- Lactuca sativa: Lsa010313
- Nicotiana benthamiana: Niben101Scf03693g08008.1, Niben101Scf03072g03007.1
- Nicotiana tabacum: XP_016433149.1, XP_016444420.1
- Petunia inflata: Peinf101Scf01427g00001.1
- Sesamum indicum: XP_011099583.1, XP_011097216.1
- Solanum lycopersicum: Solyc02g085600.1.1
- Solanum melongena: Sme2.5_00099.1_g00002.1
- Solanum tuberosum: PGSC0003DMP400022481
Sequences
CDS Sequence:
- >CA02g22940|Capsicum_annuum|GRAS|CA02g22940
ATGAAAGTGCCCTTTTCCACTAATGACAACGTGAGTTCTAAACCATTGATTAGCAACAACAACAATAACAATAACCTTCGAAACGTTACCTTCCCGGCCGCTACCAACGGCCCTAATTTGTGCTACGAACCCAAATCAGTCCTCGAGCTCCGCCGTAGCCCAAGCCCCATCGTCGAAAAGCAGATTACAACGAATCCAGATTTGTCAGCTCTGTGTGGCAGCGAAGATCCTCTTCAGTTAGGTGATCATGTTCTGAGCAACTTTGAAGATTGGGATTCATTGATGAGAGAACTTGGCTTGCACGACGATTCTGCTTCCCTTTCGAAAACTAACCCTCAACTCAGCCTCACCCACAGCGAGTCACTGACTCATTTCCATAATCTCTCCGACTTCTCAGCTGACTCGACTCAGTTTGCTAGCCCTGATTTTTCTTTCTCTGAGAGTACTTTCCCTCAGCAGTTCCCCGCGGTGAATCAGGGAAGTTTCATCAACGCCCTCGATCTCTCCGGTGATATCCACCAGAATTGGAACGTAGGATTTGATTACGTTGATGAACTCATTCGTTTCGCTGAGTGCTTCGAAACGAATGCTTTCCAACTCGCACATGTGATACTGGCACGGCTCAATCAACGCCTCAGATCCGCCGCCGGAAAACCTCTCCAACGAGCTGCCTTTTACTTCAAGGAAGCACTTCAAGCTCAACTCGCTGGGTCAACTCGGCAAACTCGTCCATCGAGTTCCTCCGATGTGATTCAAACTATCAAATCGTACAAAATATTCTCGAATATTTCTCCGATCCCTATGTTCTCTAGCTTCACAGCGAATCAAGCCGTGCTGGAAGCAGTTGACGGCTCGATGCTAGTCCACGTCATCGATTTCGACATCGGGCTTGGTGGTCACTGGGCTTCCTTCATGAAAGAGTTAGCCGATAAAGCCGAGTGCCGTAAAGCAAACGCGCCGGTTCTTCGAATTACAGCTCTAGTTCCTGAAGAATACGCTGTGGAATCAAGGTTGATCAGAGAAAACTTAACCCAATTTGCTCGTGAACTCAATATTGGTTTCGAAATTGACTTTGCTCTAATTCGTACATTCGAATTGTTATCTTTCAAAGCCATAAAGTTCATGGAGGGAGAGAAAACAGCGGTGCTTTTATCCCCCGCTATATTCCGACGGGTCGGGTCAGGATTTGTTAACGACCTCCGTCGTATATCCCCTAACGTGGTGGTACACGTTGACAGCGAAGGACTTATGGGTTATAATGCGATGTCGTTCCGGCAGACAGTAATAGACGGGCTAGAATTCTACTCTACCCTACTGGAATCACTGGAAGCGGCAAATATTGGTGGCGGGAACTGCGGTGATTGGATGAGGAAGATTGAGAATTACGTGCTGTTTCCGAAGATAGTTGATATGGTGGCGGCTATAGGGCGGCGAGGCGTCGGCTTCGGGGGAGGAGGATCATGGAAGGATGCGATGGTGGGTGCCGGATTCCGGCCGATGGGGTTAAGCCAGTTTGCGGATTTTCAGGCAGATTGTTTGTTGGGGAGAGTACAGGTAAGAGGATTCCACGTGGCAAAGAGACAAGCAGAGATGTTGCTTTGCTGGCATGATAGGGCATTAGTAGCCACGTCAGCATGGAGGTGTTAG
Protein Sequence:
- >CA02g22940|Capsicum_annuum|GRAS|CA02g22940
MKVPFSTNDNVSSKPLISNNNNNNNLRNVTFPAATNGPNLCYEPKSVLELRRSPSPIVEKQITTNPDLSALCGSEDPLQLGDHVLSNFEDWDSLMRELGLHDDSASLSKTNPQLSLTHSESLTHFHNLSDFSADSTQFASPDFSFSESTFPQQFPAVNQGSFINALDLSGDIHQNWNVGFDYVDELIRFAECFETNAFQLAHVILARLNQRLRSAAGKPLQRAAFYFKEALQAQLAGSTRQTRPSSSSDVIQTIKSYKIFSNISPIPMFSSFTANQAVLEAVDGSMLVHVIDFDIGLGGHWASFMKELADKAECRKANAPVLRITALVPEEYAVESRLIRENLTQFARELNIGFEIDFALIRTFELLSFKAIKFMEGEKTAVLLSPAIFRRVGSGFVNDLRRISPNVVVHVDSEGLMGYNAMSFRQTVIDGLEFYSTLLESLEAANIGGGNCGDWMRKIENYVLFPKIVDMVAAIGRRGVGFGGGGSWKDAMVGAGFRPMGLSQFADFQADCLLGRVQVRGFHVAKRQAEMLLCWHDRALVATSAWRC*