Information report for CA01g13150
Gene Details
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Functional Annotation
- Refseq: NP_001311876.1 — scarecrow-like protein 6
- Refseq: XP_016569265.1 — PREDICTED: scarecrow-like protein 6
- Refseq: XP_016569270.1 — PREDICTED: scarecrow-like protein 6
- TrEMBL: A0A1U8GDU0 — A0A1U8GDU0_CAPAN; scarecrow-like protein 6
- TrEMBL: K7RXJ6 — K7RXJ6_CAPAN; GRAS family transcription regulator
- STRING: PGSC0003DMT400012104 — (Solanum tuberosum)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
Family Introduction
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature and News
Homologs
- Actinidia chinensis: Achn370751
- Nicotiana benthamiana: Niben101Scf00317g11013.1, Niben101Scf09790g00019.1, Niben101Scf09790g00012.1, Niben101Scf00317g11002.1
- Nicotiana tabacum: XP_016437506.1, XP_016487313.1, XP_016437508.1, XP_016437510.1, XP_016487314.1, XP_016437509.1
- Petunia inflata: Peinf101Scf00229g02002.1
- Solanum lycopersicum: Solyc08g078800.1.1
- Solanum melongena: Sme2.5_05903.1_g00003.1
- Solanum tuberosum: PGSC0003DMP400008418
Sequences
CDS Sequence:
- >CA01g13150|Capsicum_annuum|GRAS|CA01g13150
ATGATTGTAATACCTCAAGGAAATAGCATACCAGCAAAAGGGGTTCTTTGTGTTTCTAATTTTGTGCCTTCCATTACTTCATCTTCTTCTTCTTCACAAGAAGCACCAATTTTCATGAAAGATGCAAACTTTACAAGAAATGAACCTGTTTCTGAGTTGGATACAAGAAGTCCTAGTCCTTCAGCTTCATCTTCTTCATGTTCTTATGGTGGAAACACTGCAGTTCCAGGTGCTGGAAGTTGGAAAACTGATGGCAAGAAAGAGGAGTTAGTGATGGAGCTGCAGCCATTAACTGTGGGGTCGGATCCAGAAAAATCTGTTCTTGGTTTTGGAGATTTGGACAATTTGTTGCCTGAATTTGTTGGCTCTGACCAAAGCTTTCTCCGGTGGATTTCAGGTGATGTGGAGGACCCTTCAGTCAGCTTGAAACAATTACTCAATGGGGATTTTGGTTCTGGATTCGAGGTTTCAGGAACAGGTTCTTTAGTTCATACAGATGCTAATCTCTCCTTTTCTGGTTCAAATATCTGTCTGAATGCCAATATTGAAAGATTTGGCACTGTTATAGACTCAAATAATGGTCGAAATAATAATAGTTTCGAGAAGAATCTGAATGTCAATCCTTATTTAGAACAGAAGCCACAAGTAATGGCAAACCAAAACCAGTTCCAGAATGCTGTCTGTGTCAACATTTTAGGGTCCTCGCCATGTGATATCAATCAAGAACAGCCTCTGTCCAAACGTCACAATTCGGGTGCCCTTGTTTCGAGTTTGGGTGGTCTATTGCCTAAAGTTCCGTTTTTTGATGCCAGTTGTGACTTCTTGATGAGGAAACAACCATTGGGGCAAATGCAGCAACAAGTCAATTTGCTGCCTGCTCAACAGTTTCAGCCGAAGCCATTAATTGTACCTAAGCTTGAGGCAGCTGGTGGTGGTGGTAATGGTAATTTGATGGTGCCTCGTCATCAACTGCAGGAACAACAATTTATTTATGACCAGATTTTTCAGGCCTCAGAACTATTGCTGGCCGGACAATTCTCAAACGCGCAATTGATATTGGCGCGGCTCAATCAACAGCTTTCTCCCATTGGGAAACCCTCAAGGAGGGCTGCTTTTTATATCAAGGAGGCTCTGCAGTTGCCTTTCCTTGTGCCTTGCACATCCACTTTTTTGCCTCCAAGAAGTCCCACCCCATTTGATTGTGTGCTTAAGATGGATGCTTATAAGTCCTTCTCCGAAATATCTCCACTTATCCAGTTCATGAATTTCACCTCCAATCAGGCTATTCTTGAAGCTCTTGGGGATGCTGAGCAAATTCACATAATAGATTTTGACATCGGTTTTGGTGCTCAATGGTCCTCGTTTATGCAAGAACTTCCAAGTAGCAGTAGAAAGGCAACTTACCTGAAGATTACAGCTTTTGCATCTCCTTCAACCCACCACTCTGTTGAAATTGGCATCATGCACGAAAGTTTAACACAGTTTGCTAATGATGCGGGGATGAGATTTGAGCTTGAAGTTATTAACTTGGATTCTTTCGACCCTAAGTCTTATCCCTTGTCCTCCTTGAGGTCATCTGAGTGCGAGGCAATTGCTATTAATTTCCCTATCTGGTCTATTTCAAGCCTTCCGTTTGCATTTCCTTCGCTTCTTCATTGCATGAGGCAGCTTTCTCCCAAAGTAGTTGTATCACTGGAATGCGGTTGTGAACGTACTGAACTCCCCTTAAAGCATCACCTTCTCCATGCCCTCCAGTACTACGAGACACTCTTAGCCAGTATTGATGCTGCTAATTTAACTCCAGACATTGCGAAAAAGATCGAGAGGTCTCTTCTCCAGCCGAGTATTGAGAACATGATCTTGGGGCGGCTCCGATCCCCTGATAGGATGCCCCCATGGAGAAACCTATTTACTTCCGCAGGATTTTCACCAATTGCATTTAGTAATATGACCGAAGTCCAGGCCGAATGTGTTGTTAAAAGAACTCATGTAGGAGGTTTTCATGTTGAGAAGCGACAGACATCTCTTGTGCTATGCTGGAAACAGCAGGAGCTCCTGTCAGCTGCTACTTGGAGGTGTTAA
Protein Sequence:
- >CA01g13150|Capsicum_annuum|GRAS|CA01g13150
MIVIPQGNSIPAKGVLCVSNFVPSITSSSSSSQEAPIFMKDANFTRNEPVSELDTRSPSPSASSSSCSYGGNTAVPGAGSWKTDGKKEELVMELQPLTVGSDPEKSVLGFGDLDNLLPEFVGSDQSFLRWISGDVEDPSVSLKQLLNGDFGSGFEVSGTGSLVHTDANLSFSGSNICLNANIERFGTVIDSNNGRNNNSFEKNLNVNPYLEQKPQVMANQNQFQNAVCVNILGSSPCDINQEQPLSKRHNSGALVSSLGGLLPKVPFFDASCDFLMRKQPLGQMQQQVNLLPAQQFQPKPLIVPKLEAAGGGGNGNLMVPRHQLQEQQFIYDQIFQASELLLAGQFSNAQLILARLNQQLSPIGKPSRRAAFYIKEALQLPFLVPCTSTFLPPRSPTPFDCVLKMDAYKSFSEISPLIQFMNFTSNQAILEALGDAEQIHIIDFDIGFGAQWSSFMQELPSSSRKATYLKITAFASPSTHHSVEIGIMHESLTQFANDAGMRFELEVINLDSFDPKSYPLSSLRSSECEAIAINFPIWSISSLPFAFPSLLHCMRQLSPKVVVSLECGCERTELPLKHHLLHALQYYETLLASIDAANLTPDIAKKIERSLLQPSIENMILGRLRSPDRMPPWRNLFTSAGFSPIAFSNMTEVQAECVVKRTHVGGFHVEKRQTSLVLCWKQQELLSAATWRC*