Gene Details:
- Gene ID: AA90G00078
- Gene Family: GRAS Family
- Description: GRAS Family protein
- Species: Aethionema arabicum
- Source: GRAS family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: XP_006417795.1 — scarecrow-like protein 14
- Swissprot: Q9XE58 — SCL14_ARATH; Scarecrow-like protein 14
- TrEMBL: E4MWR1 — E4MWR1_EUTHA; mRNA, clone: RTFL01-12-F16
- STRING: XP_006417795.1 — (Eutrema salsugineum)
Gene Ontology:
- GO:0009410 — Biological Process — response to xenobiotic stimulus
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0005829 — Cellular Component — cytosol
Family Introduction:
- The GRAS family of putative transcriptional regulators is found throughout the plant kingdom, and these proteins have diverse roles in plant development, including root development, axillary shoot development, and maintenance of the shoot apical meristem (Bolle, 2004). GRAS proteins show conserved residues in the C terminus but contain a variable N terminus with homopolymeric stretches of certain amino acids. It has recently been shown that two GRAS proteins that regulate root growth, SCARECROW (SCR) and SHORTROOT (SHR), interact with each other (Cui et al., 2007), while a class of GRAS proteins involved in regulating plant growth, the DELLA proteins, interact with a transcription factor involved in phytochrome signaling (de Lucas et al., 2008; Feng et al., 2008).
Literature:
- GRAS proteins form a DNA binding complex to induce gene expression during nodulation signaling in Medicago truncatula. DOI: 10.1105/tpc.108.064501 ; PMID: 19252081
Sequences:
CDS Sequence:
- >AA90G00078|Aethionema_arabicum|GRAS|AA90G00078
ATGGGTTCCTATTCCGACGGATTTCCCGAATCTCTAGACGGATTCGATTTCAACATCGGATCTGATTTCTCAATCTCAAACAACCCTTTAAATTTATCCAATGAATTCTACATAAACGACCAATCTTTCTCAAATCTCACCTCTTGGGATCCAAATCCATCTCCCCCTCAAGAACCATATCCTCAAAATACAACAGAAGACTCCTTATCTCCATCTGACGACACCGATTTCTCTGATTCAGTTTTAAAATACATAAGCCAAGTTCTCATGGAAGAAGACATGGAAGAAAAGCCTTGTATGTTTCATGATGCTTTAGCTCTTCAAGCAGCTGAAAAGTCTTTATACGAAGCCTTAGGTGAAAAATACCCATCAAAGTTACTTGATAGCCCTGATGAATCTTGTTCAATTTCATCTACAGCTACCACAACGTCCTTTGATTCTCATTGGAGTCATGATACTTTAGAAACTAGACCTTCTTGGTTACATACACCAATCCCATCTAACTTTGTTTTCCAATCTACTTCAAAATCTAGCCCACAGTATAAACCGATTTCCCGGTCTGCTGATTCGGTTTCGGGTTTGTTCAGTGATCACCAATTAGCTATACAGTTCAAGAAAGGAGTAGAGGAAGCAAATAAATTCCTTCCTAAATCTTCTAATCTTTTGATTGATGTTGATCATTATATACCGAATTCGATGTTGAATGATTCTAATGTTGCTGTAAAGATGGAGAAAGATAGAGATGAGATAGAACATTCAAACAGATTAACTCGAAAGAAAAGCCATTGGCGTGAAGACGAAGATTTCGTCGAAGAAAGAAGTAATAAGCAATCAGCAGTTTATGTTGAAGAAACCGAATTATCTGAAATGTTTGATAAAGTTTTACTATGTGGAAGTGAACAACCTGTTTGCATTCTTCACCAAAAGTTTCCAGCAGAATCCGCCAAAGGCGAGACAACAACAACATCGCAGATTGCGCAATTAAATGGAGGAAACCGCCATGGAAAGAAATCGTCAGGTAATACTAAAGAAACTGTTGATTTGAGAACTCTTTTGATCTTATGTGCACAAGCGGTTTCAGTAGATGATCGAAGAACTGCGAATGAAATGCTAAGACAGATTAGGGAACATTCCTCACCTTTAGGTAATGGTACCGAAAGATTAGCTCATTACTTTGCAAACAGTCTTGAAGCGAGATTAGCTGGTACCGGTACACAGATCTACACGGCGTTATCTTCGAAAAAAACATCAGCTGCAGATATGTTAAAGGCTTACCAAACTTATATCTCAGTCTGTCCATTCAAGAAAGTCGCAATCATATTCGCTAACCACAACATTATGTGTTTAACTGCAAATGTCAAGAGTATTCACATCATAGATTTCGGTATATCTTATGGTTTTCAATGGCCTGCGTTGATTCATCGCCTCTCATATCGATCTGGTGGACCGCCAAAGCTGCGAATAACCGGTATTGAGCTACCTCAACGCGGGTTTAGACCAGGAGAAGGAGTACAAGAGACGGGAAATCGCTTAGCTCGATATTGTCAACGCTATAATGTTCCTTTCGAGTACAACGCTATAGCGCAGAAATGGGAAACAATAAAAGTTGAAGACTTAAAGATTAAAGAAGGAGACTTTATTGTTGTAAACTCTTTGTTCCGTTTCAAGAATCTTTTAGACGAAACTGTGGTGATAAACAGTCCACGCGACGCAGTCTTGAACTTGATAAAGAAAGTGAAGCCGAATGTGTTTATCCCGGCGATTCTTAGCGGTTCTTACAACGCGCCATTCTTCGTGACGAGGTTTAAAGAAGCGTTGTTTCATTACTCGGCGTTGTTTGATATGTGTGATTCGAATTTAGCAAGGGAAGATGAGATGAGATTGATGTTTGAGAAAGAGTTTTATGGTAGGGAGATTATGAATGTTGTGGCGTGTGAAGGGACAGAGAGAGTGGAGAGACCGGAGAGTTATAAGCAGTGGCAAGCTCGGGTGATTCGAGCGGGGTTTCGACAAGTTCCGTTGGAGAAAGAAGTGATGCAGAAGTTGAAGATGAAAGTAGAAAATGGATATGATAAGAACTTTGATGTTGATCAGAATAGTAATTGGTTGATTCAAGGATGGAAAGGGAGAATTGTGTATGCTTCTTCTGTTTGGGTTTTAGATTCAGGAAAC
Protein Sequence:
- >AA90G00078|Aethionema_arabicum|GRAS|AA90G00078
MGSYSDGFPESLDGFDFNIGSDFSISNNPLNLSNEFYINDQSFSNLTSWDPNPSPPQEPYPQNTTEDSLSPSDDTDFSDSVLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKYPSKLLDSPDESCSISSTATTTSFDSHWSHDTLETRPSWLHTPIPSNFVFQSTSKSSPQYKPISRSADSVSGLFSDHQLAIQFKKGVEEANKFLPKSSNLLIDVDHYIPNSMLNDSNVAVKMEKDRDEIEHSNRLTRKKSHWREDEDFVEERSNKQSAVYVEETELSEMFDKVLLCGSEQPVCILHQKFPAESAKGETTTTSQIAQLNGGNRHGKKSSGNTKETVDLRTLLILCAQAVSVDDRRTANEMLRQIREHSSPLGNGTERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYISVCPFKKVAIIFANHNIMCLTANVKSIHIIDFGISYGFQWPALIHRLSYRSGGPPKLRITGIELPQRGFRPGEGVQETGNRLARYCQRYNVPFEYNAIAQKWETIKVEDLKIKEGDFIVVNSLFRFKNLLDETVVINSPRDAVLNLIKKVKPNVFIPAILSGSYNAPFFVTRFKEALFHYSALFDMCDSNLAREDEMRLMFEKEFYGREIMNVVACEGTERVERPESYKQWQARVIRAGFRQVPLEKEVMQKLKMKVENGYDKNFDVDQNSNWLIQGWKGRIVYASSVWVLDSGN