Information report for WALNUT_00014897-RA
Gene Details
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Functional Annotation
- Refseq: XP_018826887.1 — PREDICTED: GATA transcription factor 19-like
- Swissprot: Q8GXL7 — GAT24_ARATH; GATA transcription factor 24
- TrEMBL: A0A2I4F5G6 — A0A2I4F5G6_JUGRE; GATA transcription factor 19-like
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004504860.1
- Cucumis sativus: Cucsa.218190.1
- Glycine max: Glyma.07G182700.1.p, Glyma.08G067200.1.p
- Gossypium arboreum: Cotton_A_15821_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A12G0146, Gh_D12G0161, Gh_D13G0483
- Malus domestica: MDP0000316985
- Prunus mume: XP_008237241.1, XP_008237243.1, XP_008237242.1
- Prunus persica: Prupe.8G071300.1.p, Prupe.8G071300.3.p, Prupe.8G071300.2.p
Sequences
CDS Sequence:
- >WALNUT_00014897-RA|Juglans_regia|GATA|WALNUT_00014897-RA
ATGCCGGAATCGAATCGTGAAGCTTCGATGTACAATTCAGGAGCAATGAACAATAACATAGAGAGTCACGTTGAGGAAGAAGACGAAGATGTTGCAGGAGACGAAGAGTCCATTGACAACCCCCATATGCGGTTCGAAGACAACGCCTTAGCGGTGAAGTTAAACGGTGGCGTCCAGGAAGTCGCTACAAATTCCATGTACGTTCCCGGCTCAGAATTTCCTCCGGTGGCGGGTAACGGAGGCGCTGACCAACTCACTCTCTCGTTCCAGGGCGAGGTTTATGTGTTCGATGCGGTTTCTCCGGATAAGGTGCAGGCAGTGTTGTTACTTTTGGGTGGATATGAAATCCCTTCTGTCATGCCGACCATGGGAGCAGCACCTCTTAATCTAAGGGTGGGTATGAATGACTTTCCTGGAAGATCAATTCAACCACAGAGAGCTGCTTCTTTAAGCCGTTTTCGGGAGAAGAGAAAAGAGCGGTGTTTTGATAAGAAAATCCGTTATAGTGTACGGAAAGAAGTTGCACTCAGGATGCAGCGTAAGAAGGGTCAGTTTACATCATCCAAGGCCATAGCTGATGTAGTGGGGTCAGAGTCTTCAGTTCTTAGCGGAGCACAGGGTTCTGGACAAGATGATAGCATGCAGGAAACTTTATGTACACATTGTGGAATCAGTTCAAAGTCTACTCCAATGATGCGTCGAGGGCCAGCCGGTCCAAGGACTTTGTGTAATGCATGTGGGCTCAAGTGGGCCAACAAGGGAGTTTTACGAGATCTTCCCAAGGTTTCCAATGTGAGTGTCCTGGATTCATCTGTGAAGACAATTGAACAGGGTGATGGTGATGCAATTGATTCAGATGCTGTAACCCCGGCTGCTGCAGAACTGGTCTCCTCTGCTAATGGCGATAACTCAGCTCCACTGCAGGCGAGGCCATTCGAGGAGCCAGAGGACCAGCTGGTGCTGGTGCCGATAGAGGTGGAAGGTGGATCCGAAGACGAATACCTGGATGGAGGTGCCCCGCACGAGGCCATGAATGTAGTGGAAGAGGTGGAAGCTCGGGTGAATAGCGGTTCCGTGTTGAAGTCTCGCACCAGCGAGCTCACAGTCGCGTTCGAAGGCGAGGTCTACGTTTTCCCCGCCGTTACGCCGGAGAAGGTGCAGGCAGTGCTACTACTGCTGGGAGGTTGTGATATACCTGATAGTGTCCCTAGCTCTCAGTTTCTGCTACAACAGAATAGCAGGGGTATAGGTGATACATCACGTGGTTCAAAACTTTCGCGAAGAATTGCATCCCTTGTTAGATTCCGTGAAAAGCGAAAAGAGAGATGTTTTGAAAAGAAAATTCGGTACACTTGTCGAAAAGAGGTTGCTCAGAGGATGCATCGTAAAAATGGACAGTTTGCGTCTTTAAAGGGCACCTACAAAGCGGCTGCAGAAAATGGGGATTCAAGTGATGGCACACCTAGTCCTGCAACTATTTTACGTAGATGTCAACACTGTGGTATTAGTGAAAAGTCTACTCCAGCGATGCGTCGGGGGCCAGCTGGGCCTAGATCCCTTTGCAATGCATGTGGACTTATGTGGGCAAACAAGGACACTTCAGCTGATATTAAGCCTTCGACGATGGAACCTGAAAATTGTTATGCTGACGAGGATGAGCAGGGAAGCCTGAATGATGCAAAACCTGTACCTTTGGAGTTTAAAAATCCTTCTACGAGGTCAGGTGAGCAGGATTTCATGCAAACGACGGAAGTTGTTACTGACCATCTGTCCATTGAACTGGAGAATCCATCCGTTGACCTTGGTGATCAGGAAACTATTGATGAACTTGCTAATGCTTCGGGGACAGAATTTGAGATACCAGAGAACTTTGATGAGCAGGTTGACATTGATGTTTCGAACATGGGGACTGATTGGCCAAGGAGCTGA
Protein Sequence:
- >WALNUT_00014897-RA|Juglans_regia|GATA|WALNUT_00014897-RA
MPESNREASMYNSGAMNNNIESHVEEEDEDVAGDEESIDNPHMRFEDNALAVKLNGGVQEVATNSMYVPGSEFPPVAGNGGADQLTLSFQGEVYVFDAVSPDKVQAVLLLLGGYEIPSVMPTMGAAPLNLRVGMNDFPGRSIQPQRAASLSRFREKRKERCFDKKIRYSVRKEVALRMQRKKGQFTSSKAIADVVGSESSVLSGAQGSGQDDSMQETLCTHCGISSKSTPMMRRGPAGPRTLCNACGLKWANKGVLRDLPKVSNVSVLDSSVKTIEQGDGDAIDSDAVTPAAAELVSSANGDNSAPLQARPFEEPEDQLVLVPIEVEGGSEDEYLDGGAPHEAMNVVEEVEARVNSGSVLKSRTSELTVAFEGEVYVFPAVTPEKVQAVLLLLGGCDIPDSVPSSQFLLQQNSRGIGDTSRGSKLSRRIASLVRFREKRKERCFEKKIRYTCRKEVAQRMHRKNGQFASLKGTYKAAAENGDSSDGTPSPATILRRCQHCGISEKSTPAMRRGPAGPRSLCNACGLMWANKDTSADIKPSTMEPENCYADEDEQGSLNDAKPVPLEFKNPSTRSGEQDFMQTTEVVTDHLSIELENPSVDLGDQETIDELANASGTEFEIPENFDEQVDIDVSNMGTDWPRS