Information report for Rsa1.0_01566.1_g00006.1
Gene Details
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Functional Annotation
- Refseq: XP_018484286.1 — PREDICTED: calmodulin-binding protein 60 G-like
- Swissprot: F4K2R6 — CB60G_ARATH; Calmodulin-binding protein 60 G
- TrEMBL: A0A397Z605 — A0A397Z605_BRACM; Uncharacterized protein
- STRING: Bra009925.1-P — (Brassica rapa)
- GO:0002229 — Biological Process — defense response to oomycetes
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009620 — Biological Process — response to fungus
- GO:0009789 — Biological Process — positive regulation of abscisic acid-activated signaling pathway
- GO:0009816 — Biological Process — defense response to bacterium, incompatible interaction
- GO:0010112 — Biological Process — regulation of systemic acquired resistance
- GO:0010224 — Biological Process — response to UV-B
- GO:0071219 — Biological Process — cellular response to molecule of bacterial origin
- GO:0071456 — Biological Process — cellular response to hypoxia
- GO:0080142 — Biological Process — regulation of salicylic acid biosynthetic process
- GO:1902584 — Biological Process — positive regulation of response to water deprivation
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005516 — Molecular Function — calmodulin binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Rsa1.0_01566.1_g00006.1|Raphanus_sativus|GATA|Rsa1.0_01566.1_g00006.1
ATGAAGATGCGAGACCGCCTTTTTCATGGGGGTAGTGGGTACAGTGGTTTAAAAGCTCACAAATTAACATTCAAGACAGCCGTGAAGAAAGTCATGAGACATATGTCAAATAACCAAATCATGGTTCATATGGAGAACATGTTCAGAAAAATTGTTCGGGAGGAGCTTGAACGTCATATTCAACAACACCACCTCTCTTCGTCGTGGTCCCAAATCGAGCGACCGCGTTCAGAAACGCCATCGTCACGTACACAATTCAAGCTGCGATTCATAAACTCGCCGCCGCCGTCGATATTCACGGGAGCAAAGATCGAAGCCAAGAACGGTTCCCCGTTAGCTATCGAGCTCGTGGACGCAGCCACGAACGCTCGAGTCGTCTCGGGACCGCTCTCGTCTTCTCGAGTTGACTTAGTGCCGCTGAACGCTGACTTCACGGACGAAAGCTGGACCGTTGACTTATTCAAACGGTATATTCTAAAACCACGCGACGGGAAACGTCCGTTACTCGCCGGAGATGTAACGTTGACTCTTAAAAACGGTGTTGGAGTTGTCGCCGTCGCTTTCACGGATAACTCGATATGGTCTAGGTGTCGGAAGTTCCGGTTAGGTGCTAGACTAACCGGTGATGGAGCCGTGGAGGCTAGAAGTGAAGCGTTTAAGTGTAAAGACCAACGTGGAGAATCTTATAAGAAACATCATCCTCCGTACCCCGGTGACGAGGTTTGGAGACTAGAGAAAATCGCCAAAGATGGCGCTTCAGCGTTGCGTTTGGCTGAACGGGACGTTTATACTGTCAAGGACTTCCGCCGTTTCTATGCAAAGGATCCAAGTGCGTTATATAATATACTTGCTGTTGGTGGAGGGATCTCGAAGAAAATATGGGAATCAATTGTGACTCACGCAATGTGTTGCGTTTTGGATGAAACAGAGTGTTACATCTACGACGCAATCGCTCATGACGTATCACTTGTCTTCAACTCTGTTTATGAAGTGACCAAAGTGTTCATCTGCGGTGTCCTTGGACACGTGGATCAGCTACCTAGCTATCAGCTGGACCAGCTGAAGCGTGAAGCTTATCAAAACGTTAGCCGCTTTAGAGACGGTAGGACCTTTGCGGATGATCCGCAAAGGTCCTTACAGTGCCCGCAAAATCTAGGATTTGGTCCTGGATTCCAGCAGCACATGGACTTTCAAGGACCATCAGACTCTTCGATGCATGCTTACTTCACAGGTTCGTGCTCCACTTCCCAACCCGAAACGCTGATGAGTTTCGAGAACTCACCAGCCAAAACATTTCATATCGACCCAACATTCATACCGACTTTCAGAAACAACTTTAGGGCAAGTGAACACGATATGATACATGACGAATTACAAAGCCTAGTGTCAAGAGGTTATAACAAAAATAACGAGGATGAGAGCGGTTTTGCTTATCATCACCATCATGATAACTGGTCACCTGGTGCGGCAGTTTGGGAGCAACAAGAGTATGACAATTTGTGTGTTAGCGTATCGGGCACGGAAAAAGCTGGGATGTATGATGTTCGTATTGCAAATATTGGGGGATCTCCGAGAGCCAGGTGGTGCAAGGTTAAAGCAGCTTTTAAGCTCCGTCAAGTCTGGAGACACGCAAATGCTAGAAAGCGAGGGAAGGCTTATAAGTGGTATAGTTCTTGGCTTGGCTACTGTGGTATCAAAAAAGGAGCTCCCAAAACAAAGATGGAAGAAGAGAAGTGTTGCAGTGAGTGCAAGACCACCAAGACACCGATGTGGAGAGGTGGACCATCTGGTCCCAAGTCACTTTGCAATGCATGTGGGATCAGATTCAGGAAACAAAGACGGTCCGAGTTATTGGGTATTCGTATTATTCACACCCACAAAGACTACAAGAAGATAAAATCATCAACATCTTCACCATCACTACCACTATCAAATGGTGGCGTCTCTACTAAGAAACGACGGATTCTAAAGGAGGAAGAACAAGCTGCTCTTTGTCTACTATTATTGTCTTGCAACTCTGTGTTCGTCTGA
Protein Sequence:
- >Rsa1.0_01566.1_g00006.1|Raphanus_sativus|GATA|Rsa1.0_01566.1_g00006.1
MKMRDRLFHGGSGYSGLKAHKLTFKTAVKKVMRHMSNNQIMVHMENMFRKIVREELERHIQQHHLSSSWSQIERPRSETPSSRTQFKLRFINSPPPSIFTGAKIEAKNGSPLAIELVDAATNARVVSGPLSSSRVDLVPLNADFTDESWTVDLFKRYILKPRDGKRPLLAGDVTLTLKNGVGVVAVAFTDNSIWSRCRKFRLGARLTGDGAVEARSEAFKCKDQRGESYKKHHPPYPGDEVWRLEKIAKDGASALRLAERDVYTVKDFRRFYAKDPSALYNILAVGGGISKKIWESIVTHAMCCVLDETECYIYDAIAHDVSLVFNSVYEVTKVFICGVLGHVDQLPSYQLDQLKREAYQNVSRFRDGRTFADDPQRSLQCPQNLGFGPGFQQHMDFQGPSDSSMHAYFTGSCSTSQPETLMSFENSPAKTFHIDPTFIPTFRNNFRASEHDMIHDELQSLVSRGYNKNNEDESGFAYHHHHDNWSPGAAVWEQQEYDNLCVSVSGTEKAGMYDVRIANIGGSPRARWCKVKAAFKLRQVWRHANARKRGKAYKWYSSWLGYCGIKKGAPKTKMEEEKCCSECKTTKTPMWRGGPSGPKSLCNACGIRFRKQRRSELLGIRIIHTHKDYKKIKSSTSSPSLPLSNGGVSTKKRRILKEEEQAALCLLLLSCNSVFV