Information report for MELO3C016870P1
Gene Details
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Functional Annotation
- Refseq: XP_008452719.1 — PREDICTED: GATA transcription factor 21-like
- TrEMBL: A0A1S3BVA6 — A0A1S3BVA6_CUCME; GATA transcription factor 21-like
- STRING: XP_008452719.1 — (Cucumis melo)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0007623 — Biological Process — circadian rhythm
- GO:0009416 — Biological Process — response to light stimulus
- GO:0009740 — Biological Process — gibberellic acid mediated signaling pathway
- GO:0009910 — Biological Process — negative regulation of flower development
- GO:0010187 — Biological Process — negative regulation of seed germination
- GO:0010255 — Biological Process — glucose mediated signaling pathway
- GO:0010380 — Biological Process — regulation of chlorophyll biosynthetic process
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_04712
- Citrullus lanatus: Cla020879
- Citrus sinensis: orange1.1g026843m, orange1.1g023724m, orange1.1g020987m, orange1.1g021178m
- Cucumis sativus: Cucsa.353330.1
- Glycine max: Glyma.14G094800.2.p, Glyma.14G094800.1.p
- Gossypium arboreum: Cotton_A_14006_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A06G0803, Gh_D06G0919, Gh_D05G0434
- Lotus japonicus: Lj5g3v0404820.1
- Malus domestica: MDP0000739900
- Manihot esculenta: Manes.16G080400.1.p
- Pyrus bretschneideri: Pbr019838.1
- Vitis vinifera: GSVIVT01035406001
Sequences
CDS Sequence:
- >MELO3C016870P1|Cucumis_melo|GATA|MELO3C016870P1
ATGAATAACCCTCTCTATCCATCATCATCTTCCTTTGTGGAAAAACAAAAACAAGAAGAACAAGAAGATCCCAACCTTAAACTCTATATTTTCTCTTCTTCTTCTTCATCTAATACATCTTCACAACTTGCTTTTTCCACTTGCTTTAGTACTAATACTCCCACTACTACTACTACTCAACATCATCATCATCAAACAGTAAATCTTCATCTTCACCATCATCTTCTCCAACAATCTCACCACCAACTTCTTCTTCACCATCACCAGGATGAAAAATTCAGTGGTGGATCAAGGGAAGAAGAGAGTGAAGTGATATTATCATCATCTAGCATGAAGGAGGGGTGTGAATCAAGATTATTAGAGAAACAAGTAGAGGAGGATGATGATAATGATCACCATCAAATTATGATGAAGAAACAAGATGATCATAGTGGATCAACAAAATATTGGATGTCTTCAAAGATGAGATTGATGCAAAAGATGATGATAAACACAAACCATAATTATAAGACGAAAGTCATTATCAATGGTACTGATCATGGTGGTGCAAATAATTCAGATCATCATCAAAAAGCTACAAGAAATTACAACAGTAATAATGAAGGAAACGGTGGAAAATGGGAAACGATGACGGGCAAATCATCATCATCATCAATATCTTGTAATTCTTCAAATATTGGATCAGTACAAAACAATGGTGTTAGGGTTTGCAGTGACTGTAACACTACAACCACTCCTCTTTGGCGCAGTGGTCCTCAAGGCCCTAAGTCGCTATGTAATGCTTGTGGGATTCGGCAAAGGAAAGCAAGGCGAGCGATGGCGGATTTAGCTGCAAACAGCAGTAGGGGGTTGGTTGCTGAAACGACGGAGGCAGCGGCGTCGGGGAAGAAAGAGAAGCACAAGGAGAAGAAATCGAGGTTGAGCTGTGAAGGAGATAACAATAATGGTGGGAATAATAATGTTGGTGATCATGCGAAGATCAACGACAAGTACTGCAATAAAAATACTGATGATCATATATCAAATAACAATAATTTGAAGTCTAAAAGTGAAATAGGGATGATGAATAATGAGGTTTCATTTGATACTACTCATAATTTCACATTACGTTTGAGCAAAACTACTTCTACTACTACTACTACTAGTGGCCCTTCGGCTTTTGGGAAAGTGTTTCCAAGAGATGAGGAAGAAGCTGCCATTCTTTTGATGGAACTTTCTTGTGGCCTTCTTCACACTTGTTGA
Protein Sequence:
- >MELO3C016870P1|Cucumis_melo|GATA|MELO3C016870P1
MNNPLYPSSSSFVEKQKQEEQEDPNLKLYIFSSSSSSNTSSQLAFSTCFSTNTPTTTTTQHHHHQTVNLHLHHHLLQQSHHQLLLHHHQDEKFSGGSREEESEVILSSSSMKEGCESRLLEKQVEEDDDNDHHQIMMKKQDDHSGSTKYWMSSKMRLMQKMMINTNHNYKTKVIINGTDHGGANNSDHHQKATRNYNSNNEGNGGKWETMTGKSSSSSISCNSSNIGSVQNNGVRVCSDCNTTTTPLWRSGPQGPKSLCNACGIRQRKARRAMADLAANSSRGLVAETTEAAASGKKEKHKEKKSRLSCEGDNNNGGNNNVGDHAKINDKYCNKNTDDHISNNNNLKSKSEIGMMNNEVSFDTTHNFTLRLSKTTSTTTTTSGPSAFGKVFPRDEEEAAILLMELSCGLLHTC*