Information report for EMT30068
Gene Details
Functional Annotation
- Refseq: XP_020168016.1 — GATA transcription factor 5-like
- TrEMBL: M8C7L9 — M8C7L9_AEGTA; GATA transcription factor 13
- STRING: EMT30068 — (Aegilops tauschii)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi5g17057.1.p
- Panicum virgatum: Pavir.7NG264500.1.p, Pavir.7KG268200.3.p, Pavir.7KG268200.1.p, Pavir.7KG268200.4.p, Pavir.7KG268200.2.p
- Setaria italica: Seita.7G183600.1.p
- Setaria viridis: Sevir.7G193800.1.p
- Triticum aestivum: Traes_2DL_EEF2E71FA.1, Traes_2BL_6899C8ABD.1, Traes_2AL_0EB34993E.1
- Zea mays: GRMZM2G404973_P01, GRMZM2G404973_P03
Sequences
CDS Sequence:
- >EMT30068|Aegilops_tauschii|GATA|EMT30068
ATGCCGTCCTACGCGCACCACCACAGCTCTCTGGACGAGAGGATGGACGCCCTCAAGGGCAGTAGCCGCGAGGAGGAGACGCCCGACGAGGCCGCCGCCGAGGCGCCGGCGGCCTGGGGCTTCGCCGAGAGGGACGGCTTCTCCGTCGAGGACCTGCTGGACCTCGAGGAGTTCTGCGAGCCGGATAGGGACGGCGCCGACGAGCCCGAGGAGGCTCCGGCCGCCGCCGTGAAAGAAGAGAAGTTGAACGACGGGCCCAACCAGTCCGTCGTGTCGTATGAGCTCGCCCCTCCGGCGCCGCCAGCGCCGGAGATTGTTGCCCTGCCGGCGCATGACGTCGAGGAGGAGCTCGAGTGGGTGTCCCGTATCATGGACGACTCGCTCTCCGAGCTGCCCCCGCAGCCGGCGCCGCCCGCGTCGATGATGGCGTCGTTGGCGCCACGCCCGCCGCAGCACCGGCTACCCCAGCGGCACCCGCAGGATGGAGCGTACCGTGCTCTGCCGTCTATGTCCGACCCTATGCGGACTCCGACCATATGCGCGCTGTCCACGGAGGCGCTGGTCCCGGTCAAGGCGAAGCGCAGCAAGCGCTCTAGGGCGTCGGGGTGGTCGCTCTCGGGCCCCGCGCCGGACTCCACGTCGTCCTCGTCGACCACCACCACCTCCTCGTGCTCCTCGTCGGCCTCCTTCTCGCCCTACTTCCTGCTGGACACGCCGCACTTCGGCGCCTCGGAGCTCATGGAGGAGTACAACATCCTGCCGCCGCCGCCCAAGAAGTCCAAGCACGGCAAGAGCAGCAAGCAGAAGGCCAAGAAGCGCGGCCGCAAGCCCAAGAACCTCCCCGCACCCTCCAGCGCCATGGAGGCCGCCACCCAGAGCGACCGGCGCTGCAGCCACTGCGGCGTGCAGAAGACCCCGCAGTGGCGCGCGGGGCCGGAGGGCGCCAAGACGCTGTGCAACGCGTGCGGCGTGCGCTACAAGTCCGGCCGGCTCCTCCCCGAGTACCGGCCGGCGTGCAGCCCGACGTACTATGTTCCGTGCAGTTTTAGAGCTCATCTTGCTCGTTACATCGAGGAGTGTAGGGCTTTAGCCATAAGGAGGGGTGACGAAGATACTGATCTTGCTCTTCAGTGCAATGAGGGTTATTTGTATGGTGTTCTGTTTAGTCATGGTCGGGTGAGGAGCAAATTCCATGGTCCTTCCTGGGAACGATTGGTCAGTGATTATGGTGTTCGTCCTCGTGATATAATGACCATTAGGCTTGAACATTATGGAACGCGGATTGGCATTGATTTTTATCGTGTTGGTCGTGGAGATGCGTTGTCTCCTTTACCGTCTGTTGTTATTCCTGGTATTGTTGTGAGGAGTTTGAAGGAGTTTGTGACTTTTCCTAGGACTGGCGTTTTAACCCTTGAAGTTACTTTGGAATCTGGTGATGATGATATATATGTGAGCACTCCTTGCTCCTACTTCATTGGCTTGGGTAGTAGAATGGTGTTCAAACAGGAAGGTTTCAGTGATTTTCTCCAGGCATCGTCTATTGAAGTAAACAGCTTGGTGCTGATAACTTCCAAAAAGCGTGATGGGAGGCTCGTTGTTATCTTCAGTCTTCTGCCGCAGTGA
Protein Sequence:
- >EMT30068|Aegilops_tauschii|GATA|EMT30068
MPSYAHHHSSLDERMDALKGSSREEETPDEAAAEAPAAWGFAERDGFSVEDLLDLEEFCEPDRDGADEPEEAPAAAVKEEKLNDGPNQSVVSYELAPPAPPAPEIVALPAHDVEEELEWVSRIMDDSLSELPPQPAPPASMMASLAPRPPQHRLPQRHPQDGAYRALPSMSDPMRTPTICALSTEALVPVKAKRSKRSRASGWSLSGPAPDSTSSSSTTTTSSCSSSASFSPYFLLDTPHFGASELMEEYNILPPPPKKSKHGKSSKQKAKKRGRKPKNLPAPSSAMEAATQSDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTYYVPCSFRAHLARYIEECRALAIRRGDEDTDLALQCNEGYLYGVLFSHGRVRSKFHGPSWERLVSDYGVRPRDIMTIRLEHYGTRIGIDFYRVGRGDALSPLPSVVIPGIVVRSLKEFVTFPRTGVLTLEVTLESGDDDIYVSTPCSYFIGLGSRMVFKQEGFSDFLQASSIEVNSLVLITSKKRDGRLVVIFSLLPQ