Information report for Cla015488
Gene Details
Functional Annotation
- Refseq: NP_001267520.1 — GATA transcription factor 24-like
- Refseq: XP_011658540.1 — PREDICTED: GATA transcription factor 24-like isoform X2
- Refseq: XP_011658541.1 — PREDICTED: GATA transcription factor 24-like isoform X1
- Swissprot: Q8GXL7 — GAT24_ARATH; GATA transcription factor 24
- TrEMBL: A0A0A0K7I4 — A0A0A0K7I4_CUCSA; Uncharacterized protein
- TrEMBL: S6DLL3 — S6DLL3_CUCSA; GATA transcription factor 24-like
- STRING: XP_004141747.1 — (Cucumis sativus)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Arachis hypogaea: Ahy021882
- Cajanus cajan: C.cajan_32117
- Cucumis melo: MELO3C024287P1
- Cucumis sativus: Cucsa.359570.5, Cucsa.359570.1, Cucsa.359570.6
- Glycine max: Glyma.08G221800.3.p, Glyma.08G221800.10.p, Glyma.08G221800.5.p, Glyma.08G221800.2.p, Glyma.08G221800.6.p, Glyma.08G221800.4.p, Glyma.08G221800.7.p, Glyma.08G221800.1.p, Glyma.08G221800.9.p, Glyma.08G221800.8.p
- Prunus persica: Prupe.3G019800.1.p, Prupe.3G019800.3.p, Prupe.3G019800.2.p
- Pyrus bretschneideri: Pbr024079.1
- Ziziphus jujuba: XP_015894174.1, XP_015894172.1, XP_015894171.1
Sequences
CDS Sequence:
- >Cla015488|Citrullus_lanatus|GATA|Cla015488
ATGGACAGTATTCATGCGAGCGATGGACGGATGCATATTAGCCATGCACAGCATTCGATGCACACGCAATCGGTGCAAGACCAGGAACATCATGACTTGCATTACATGAGTAATGGGAATGGACTGGCTGATGAACATGAAAATGAAGGTCATGGTATTATGGTTGTGGAAAGGGAAGTTCAATCGGACCATGGCGATCTTGCAGAGAATCGTGGTGTAATGGTGGATCGAGGAGGAGATAACTGCGACCAGCTCACCCTGTCTTATCAGGGTCAAGTTTATGTTTTCGATTCTGTCTCGCCCGAAAAGGTTCAAGCCGTATTATTGTTATTGGGAGGTCGTGAAGTACCTTTGCGTGTTCCATCAATCCCAATAACTAATCAACAGAATGATAGGCATCTCACTGATGAAGCGTTTAACCAGGCACTTGCCAATATCCCCCCACGTCTAAGTGTCCCTCAGAGATTAGCTTCTTTGATTAGATTTCGTGAAAAGCGAAAGGAGCGTAATTTTGACAAGAAAATTCGGTATACAGTTCGTAAAGAGGTAGCACTTAGGATGCAGCGTAATAAAGGCCAGTTCACATCTTCTAAACCCATCCATGAAGATTCATCATTGGCCATAGCGAGTTGGGAACCAAATGAGAGTTGGAGTAGTGATGGAAATGGATCCCAACAACAAGAAATTCTCTGCCGACATTGTGGTATTAGTGAGAAATCAACACCAATGATGCGACGTGGACCTGATGGGCCAAGAACCCTTTGCAATGCTTGCGGACTCATGTGGGCAAACAAGGTATCAAACATAACTTCATTTCTCATCCCCCTCCAGAAAAACAAGGTCCTTGATGGAGCGTCTTCGAAGTCCTTGCAGCATAAATTCTTCAAGAAATGGATTCCAATCAGTATGGATGACGTGCAGAGGTTATTCCATTCTATGTTGGGATTAAGAGGCAGCATAGCGACTCTTATGGAGGGGTTAGAATTAGACGGCATGGATGTGAATATTTTGAGGATGATTCAAGGGGTTAAGGTAGCTACTAAGTGGGAATACAGGTGTTTAGGTATGAAAAGCAGAGGAAATTGA
Protein Sequence:
- >Cla015488|Citrullus_lanatus|GATA|Cla015488
MDSIHASDGRMHISHAQHSMHTQSVQDQEHHDLHYMSNGNGLADEHENEGHGIMVVEREVQSDHGDLAENRGVMVDRGGDNCDQLTLSYQGQVYVFDSVSPEKVQAVLLLLGGREVPLRVPSIPITNQQNDRHLTDEAFNQALANIPPRLSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKPIHEDSSLAIASWEPNESWSSDGNGSQQQEILCRHCGISEKSTPMMRRGPDGPRTLCNACGLMWANKVSNITSFLIPLQKNKVLDGASSKSLQHKFFKKWIPISMDDVQRLFHSMLGLRGSIATLMEGLELDGMDVNILRMIQGVKVATKWEYRCLGMKSRGN