Information report for 676782028
Gene Details
Functional Annotation
- Refseq: XP_010444089.1 — PREDICTED: importin subunit alpha-1
- Swissprot: Q96321 — IMPA1_ARATH; Importin subunit alpha-1
- TrEMBL: A0A4P1RU74 — A0A4P1RU74_LUPAN; Uncharacterized protein
- STRING: XP_010444089.1 — (Camelina sativa)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0006606 — Biological Process — protein import into nucleus
- GO:0005634 — Cellular Component — nucleus
- GO:0005737 — Cellular Component — cytoplasm
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0008565 — Molecular Function — protein transporter activity
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G06720, AT4G16143, AT1G02690, AT3G05720, AT5G49300.1
- Brassica napus: GSBRNA2T00055426001, GSBRNA2T00120624001, GSBRNA2T00144343001
- Brassica oleracea: XP_013614017.1
- Brassica rapa: XP_009129774.1, XP_009151727.1
- Malus domestica: MDP0000309902
- Oryza sativa: alpha1a;OsIMalpha1a, Imp3, OsIMalpha1b
- Poncirus trifoliata: Ptrif.0005s1181
- Raphanus raphanistrum: RrC6772_p3
Sequences
CDS Sequence:
- >676782028|Sisymbrium_irio|GATA|676782028
ATGTCGCTGAGACCGAACGAGAAGACGGAGGTCCGTCGAAACCGTTACAAGGTGGGTGTGGATTCAGAGGAAAGCCGAAGAAGGAGAGAGAACTTTTTGGTCGAAATCCGCAAAAGCAAACGCGAGGAAAGCTTGATGAAGAAGCGCCGCCATGGTTCGCAAGCTCCTCAAGATTCTAATCTTGATCCCACCGTCTCCTCCGTTGGTCAGTCGACGTTTACGGATATGGATCTTTTGACTATGGTCTCTAGGATTTGGTCGGATGATCCTTCGTGGCAGCTTGGATCCGCTTACATGTTCAGGCTACTTCTTTGCAGTGAGAATCCTCCCAGTGACAAAGTGATAGAAAGTGGAGTTGTGCCTCGTTTCGTTGAGTTTCTTGAGAAGGAAGATTTCCCCTGGCTTCAGTTTGAAGCGGCTTGGGTTCTGACGAACATTGCCTCTGGGACAAGGCAGCACACCAAAGTGGTAATTGATCATGGCGCTATTCCAGTATTTATCAAGCTTCTTGCTTCGCCTATTGATGATATCCGTGAACAGGCTGTATGGGCATTGGGTAATGTTGCTGGTGATTCAACACAATGCCGTGACTATGTACTCTCGTGTGGGGCATTAGAGCCACTGTTGGCTCAGCTGAATGAGCATTCTGAGTTGTCCATGCTTAGAACCGCCACTTGGACTTTGTCAAACTTCTGCTGTGGCAAACCACCACCAGCGTTTAGACAGGTGAAACTTGTTATCCATGCACTAAAACGACTTATTCACTCGAGTGATGTATTCGTCTTGAAAGACGCTTGCTGGGCACTTTCGCATCTGTCTGAGGGTAGAGAAGAAGAGATTCAAAATGTGATCGAGGCTGATGTTGTCCCAAGACTAGTTGAACTTCTCCTGCATCCTTCTCCAATCGTTCTTACTCCTGCACTTCGTACCATTGGGAATCTAGTTACTGTAAATATTGAGCAGATCCAGTGTGTGATCAATTGTGGTGCTTTAACCAATCTTGCCAACTTGCTTACTCAAAACTGTAAGAAAGTCCCAAAGAAGGAAGCTTGTTGGACGGTTTCAAACATCACTGCAGGCACTAAAGTGCAAATTCAGTCAGTTATTGATGCAAATTTGATTCCAATCTTGGTCCATCTGGCTCAAAATGCTGAATTTGACATAAAGAGAGAAGCTTTATTTGCAATATCAAATGCCACCAGATGTGGTTCTCATGATCAAATCAAATACTTGGTGGAGCAGAGCTGCATAAAACCTCTGTGTGATATCCTGGTATGTCCACAGCTGGAAATCATCTATGTGTGTCTGGACGGATTGGAAAACATCTTGAAGGCTGGAGAGGCGGAGAAGAACACAGGATACATGAACTATTTCCAACTGATTGAAGATGCAGAAGGGTTAGAAAAGATTGAGAACCTGCAGAGAAACGACAACAAAGAGATCTACGAGAAGGCTGTGAAGATTCTGGAGACATATTGGGTTGTAGAGGAAGATGAAGACACAAAAACAACATGCAGACTACCGATCACGGCGCCAACTTCGATCTCGAATCATTCAATATCATCAAGTGAAGAAATGCTAGACCACAGCGACAAGGTCTCGATGGATACAGAAACAACGAAACGAAGAGGTGAAGATGTAATGGAAGAGAACAAGAGGAGTAGTAGTAGTTGCAGCAACGAGAAGAAGACTTGCGCTGATTGTGGTACAAGCAAAACCCCTCTTTGGCGCGGTGGTCCCGCCGGTCCTAAGTCGCTTTGTAACGCGTGTGGGATCAGAAACAGGAAGAAGAGACGAGGAGTCGATGATAAGAAGCAGCTTAAGAAATCAAACTCAGTCTGCGGCGGCGGTGATCTTAGAAGAAACCCTAAGTTTGGTGAATCTCTGAAACAGAGGATGATGGATTTTGGGATGGGGAAGCGATCTACGGTGGAGAAGCAGCGACGGAAGCTTGGCGAGGAAGAGCAAGCTGCCGTGCTTCTCATGGCTCTCTCCTATGGATCAGTCTATGCTTAG
Protein Sequence:
- >676782028|Sisymbrium_irio|GATA|676782028
MSLRPNEKTEVRRNRYKVGVDSEESRRRRENFLVEIRKSKREESLMKKRRHGSQAPQDSNLDPTVSSVGQSTFTDMDLLTMVSRIWSDDPSWQLGSAYMFRLLLCSENPPSDKVIESGVVPRFVEFLEKEDFPWLQFEAAWVLTNIASGTRQHTKVVIDHGAIPVFIKLLASPIDDIREQAVWALGNVAGDSTQCRDYVLSCGALEPLLAQLNEHSELSMLRTATWTLSNFCCGKPPPAFRQVKLVIHALKRLIHSSDVFVLKDACWALSHLSEGREEEIQNVIEADVVPRLVELLLHPSPIVLTPALRTIGNLVTVNIEQIQCVINCGALTNLANLLTQNCKKVPKKEACWTVSNITAGTKVQIQSVIDANLIPILVHLAQNAEFDIKREALFAISNATRCGSHDQIKYLVEQSCIKPLCDILVCPQLEIIYVCLDGLENILKAGEAEKNTGYMNYFQLIEDAEGLEKIENLQRNDNKEIYEKAVKILETYWVVEEDEDTKTTCRLPITAPTSISNHSISSSEEMLDHSDKVSMDTETTKRRGEDVMEENKRSSSSCSNEKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRGVDDKKQLKKSNSVCGGGDLRRNPKFGESLKQRMMDFGMGKRSTVEKQRRKLGEEEQAAVLLMALSYGSVYA