Information report for 676720768
Gene Details
Functional Annotation
- Refseq: XP_018486365.1 — PREDICTED: thioredoxin-like protein CITRX, chloroplastic
- Swissprot: Q9M7X9 — CITRX_ARATH; Thioredoxin-like protein CITRX, chloroplastic
- TrEMBL: A0A3P6EQG4 — A0A3P6EQG4_BRAOL; Uncharacterized protein
- STRING: Bo5g143190.1 — (Brassica oleracea)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009657 — Biological Process — plastid organization
- GO:0034051 — Biological Process — negative regulation of plant-type hypersensitive response
- GO:0045454 — Biological Process — cell redox homeostasis
- GO:0009295 — Cellular Component — nucleoid
- GO:0009507 — Cellular Component — chloroplast
- GO:0009579 — Cellular Component — thylakoid
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0015035 — Molecular Function — protein disulfide oxidoreductase activity
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0047134 — Molecular Function — protein-disulfide reductase activity
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn209361
- Arabidopsis thaliana: AT3G06730, AT3G06740.1, AT3G06740
- Brassica napus: GSBRNA2T00057511001
- Brassica oleracea: XP_013585555.1
- Brassica rapa: XP_009124673.1
- Prunus mume: XP_008223290.1
- Prunus persica: Prupe.1G126000.1.p
- Pyrus bretschneideri: Pbr011990.1, Pbr001138.1
- Raphanus raphanistrum: RrC417_p8
Sequences
CDS Sequence:
- >676720768|Sisymbrium_irio|GATA|676720768
ATGGCTCTTGTTCAATCCAGAACTCTTCCTCACCTCAACGTCCCGTTCTCGCCCATTCTATCCACCCTCCAAGCTCCGTCGTCTCTCTTTATCCGGAGGGAAATTCGACCAGTAACCTCGCCGTTCTCATCCTCCACTACCGGGAACTTGCCCTTGTCGCCGCTGACGCATCCGCGGAAGCTTCTCTGCCCTCCACCTCGCGGCAAGTTTGTTAGAGAAGATTATCTTGTGAGGAAATTGTCAGCTCAAGAACTTCAAGAGCTGGTGAAAGGAGAGAGGAAGGTGCCGCTGATTGTTGATTTTTATGCCACATGGTGTGGACCTTGTATTTTGATGGCCCAGGAACTAGAAATGCTTGCAGTAGAGTATGAGAGCAATGCAATGATTGTGAAAGTTGATACAGATGATGAGTACGAGTTTGCACGCGACATGCAGGTTCGGGGGTTACCGACATTGTTCTTCATCAGTCCTGACCCAAGCAAAGACGCAATCAGGACAGAAGGGCTGATTCCATTACAGATGATGCGCGATATCATTGACAACGATATAAGATGTGAGCCGGTGATCTGGTCGGATCTAAGTTGTGTGAGGTGCATCTATCTTAATAACGGGTTCCTAACCCGGATCTTCGAATCAGAAGCCATGGAAAGCAAGTTCACATCCGAAGATGAAATCAGCTGCAGTAATGGAGGAGGAGAAGGTATGGTGAGCAACGAGAAGAAGAGCTGTGCCATCTGCGGCACAAGCAAAACACCTCTTTGGCGAGGCGGTCCCGCTGGTCCCAAGTCGCTATGTAACGCATGCGGGATCAGGAACAGGAAGAAAAGAAGGACAGTGATTGGCGGAAACAGATCGGAAGATAAGAAGAAGAATCACACCAGGAATCCCAAGCTTGGTGACTCGTTGAAGCAGAGGTTGATGGAGTTGGGGAGACAAGTCATGCTGCAGCGATCAACGGCTGATAATCAAAGGCGGAAGAAGCTCGGCGAGGATGAGCAAGCCGCAGTGCTACTCATGGCTCTTTCTTATGCCTCTTCTGTTTATTCTTAA
Protein Sequence:
- >676720768|Sisymbrium_irio|GATA|676720768
MALVQSRTLPHLNVPFSPILSTLQAPSSLFIRREIRPVTSPFSSSTTGNLPLSPLTHPRKLLCPPPRGKFVREDYLVRKLSAQELQELVKGERKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAMIVKVDTDDEYEFARDMQVRGLPTLFFISPDPSKDAIRTEGLIPLQMMRDIIDNDIRCEPVIWSDLSCVRCIYLNNGFLTRIFESEAMESKFTSEDEISCSNGGGEGMVSNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTVIGGNRSEDKKKNHTRNPKLGDSLKQRLMELGRQVMLQRSTADNQRRKKLGEDEQAAVLLMALSYASSVYS