Information report for 105585
Gene Details
Functional Annotation
- Refseq: XP_002502132.1 — predicted protein
- TrEMBL: C1E699 — C1E699_MICCC; Uncharacterized protein
- STRING: XP_002502132.1 — (Micromonas sp. RCC299)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0007623 — Biological Process — circadian rhythm
- GO:0009416 — Biological Process — response to light stimulus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
- GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
- Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_00324
- Daucus carota: DCAR_016194
- Glycine max: Glyma.07G016800.1.p, Glyma.08G202100.1.p
- Lotus japonicus: Lj3g3v2315420.3, Lj3g3v2315420.2, Lj3g3v2315420.1
- Malus domestica: MDP0000290156
- Medicago truncatula: Medtr8g013950.1
- Petunia inflata: Peinf101Ctg13452108g00001.1, Peinf101Scf01332g01010.1
- Populus trichocarpa: Potri.018G044900.2
- Raphanus raphanistrum: RrC14297_p1
- Salvia miltiorrhiza: SMil_00008702-RA_Salv
Sequences
CDS Sequence:
- >105585|Micromonas_sp._RCC299|GATA|105585
ATGGCGACCTCTGGGCAACAGCCCCCGGAAGCCGCGCACGCGCCCCCGCAGAGCGCGGCGCAGGCTCAGGCCAACGCCTACCACGAGCAGATGAAGGCCAATTACGCGGCGGCGTACGCGGCCAACCCGTACCTGCTCCACCCGCAGATCATGGCCATGAACGCCTTTGCGTCTGCGGCTAACCCGCACCCGCCCAACCTGGTGGAGGTGCAGACGCTCCTGAAGCGCTACGAGCACATGACGCAGGGCATGCAGAAGGTGCCCTCGCTGAAGGAGCTCAACGCGAGGGCGCCGCCGTACGCGCCCCCGGGCGTCGCGGACGCCGCACACATAAATGCTCTGCCGCCCGCCGTCAAGGTTCCCCCCGCCGTCGCGGCGCCCAACGAGGAGCCGAACGCGGTTGCTGGCGCCGGGGAGGAGGATGCGGAGGGGATGCCCGCGCCGTGCGCCGGCAAGGTTTGCGCCAACTGCCGAACGTCCAAGACGCCGCTGTGGCGTAACGGTCCGTTGGGTCCGAAGACGCTGTGCAACGCGTGCGGAGTGAGGTTCAAGCTGGGCAAGCTCCCGCCCCCAGGCGGCTGGCCCCCCGGGCACGTGCCGCCGCCGGCGCCCCCTCGCAAGCGACCCGCGCTGCTCGACTCGAACGGGCAGCCGGTGAAACGAAGCAAGGCGGAGAAGGGCGCCCTACTTGAGAAGGATGGGGAGAAGGTGAAGAAGAAGCGACGACCGCGGTTGGCGCCGGACCTCGAGGCTGAGGAGGGTGGGGAGTACCTGAGAGCCGGGAAGGTTGCCAAGACCACCGCGCTGCTGACGGATTACGACGGCGCCGTGCTCCTGATGGTCCTCGCCGGCATGTACTCGCACTGA ATGGAGGCTGGAATTGGGGCCGAAAGCCATCCATTTTATGGTTCTGGAGTGTCGAACATGAATGGGATTGGAAGGAAGAACTTTGAATGGGACTTGAATGACTGGAAGTGGGATGGCGAGCTGTTTATAGCCAGCCCTTTGACTGCTGTTCCATCGGACTGCAGGAACAAGCAGCTGTTCCCTGATGCAGCAAATGGAGTGCTGTCAAACAGCTCATCATCTTGCTCTGATGAGACTGATTTTGGGAAAGGAAATGGTGAAGCGGAGAAGCGAAGGAGGATTGTAGTGGTGGAAGAGGATGGACCATATGATGGAGCTGGATCTCTTGCTTTGAAGCTCAGGGGGCATGCTTATCCTATCCCAGAGCCCGACAATGCGAATTGTGAAGGAAAGAATGGAAAGAAGAGCAAGTTGCAGGGGGGCAATTCTAACCGTCCAACTTGCCAGGTGGTGGGCTGTGGGGCTGACCTCAGCAATTCCAAGGACTATCATAGGCGGCACAAGGTCTGTGAGATGCATGCAAAGGCCAGCACAGCAATGGTTGGAAATGCTATCCAGCGTTTCTGTCAGCAATGTAGTAGATTTCACCTTCTTCAAGAATTTGATGAAGGGAAGAGAAGTTGTCGTCGACGTTTGGCAGGCCACAATAGACGAAGGAGGAAAACCCATCCTGATGTCACTTCCAGTGGAACTTCTATAATTGATGATCAATGTAGCAGTTATATATTGATGAGTCTACTAAGGATTCTCTCGAATTTGCACTGTAATAGCTAA ATGGGGAGGGGTAGGGTTGAGCTGAAGAGGATAGAGAACAAGATCAACAGACAAGTGACGTTCGCTAAGCGTCGAAACGGGCTGTTGAAGAAAGCTTATGAACTCTCTGTTCTTTGCGATGCCGAGGTTGCTCTCATCATCTTTTCCAACCGTGGCAAGCTCTACGAGTTCTGCAGCTCCTCCAACATGCTCAAGACACTCGAACGGTACCAGAAGTGCAGCTACGGCTCCATTGAAGTGAACAACAGACCTGCAAAAGAACTCGAGAACAGTTACAGGGAGTATCTGAAGCTGAAGTCCAGATATGAGGGTCTGCATCGTCAACAGAGAAATCTCCTTGGAGAGGATTTGGGACCTCTGAACTCAAAGGAGCTTGAGCAGCTTGAGCGTCAACTAGACAGCTCTCTTAAGCAAGTTCGCTCCATTAAGACACAGTCCATGCTTGACGAACTTTCTGATCTCCAAAACAAGGAACAAATGTTGCTTGAAGCCAATAGAGCCTTGTCAATGAAGCTGGAAGAAATGGTCGGAGCAAGAACTCATCAATTTGGAGGGGCATGGGAAGGGAGTGAGCAGAACGTTTCGTACGGGCACCAGGCACAGTCACAGGGACTATTCCAGCCTCTTGAATGCAATCCGACTTTGCAAATCGGATACAATAATCCGGTGTGTTCAGAGCAGATGGCTGCAACAACACAAGCTCCTGTCCAAGCGGGTAACGGCTACATCCCTGGTTGGATGCTCTGA ATGGATTTAGACGCCGGAGTTTCCATGTCCCGCATATCTGGAACCTCTCTATTGCCGTTGCTAAACCAAGATGCAATGTGGCAAATGAATTTGAGTTCAGATGAAACAATGGAAGGCGGGGCATATCCGGATCGGCCAGGGGAGCCGGATTGCGCTTATTACATTAGGACTGGGCTTTGTAGGTTTGGTTCGACGTGCCGATTCAATCATCCCCGCGACCGCAATCTGGCTATAGCCACGGCTAGGATGAAGGGAGAATACCCGGAAAGGATCGGTCAGCCCGAATGCCAGTACTATCTTAAGACAGGAACATGCAAGTTTGGAGTGACGTGCAAGTTCCATCATCCTAGGAACAAAGTTGGGATTGCTGGAAATGTTTCGCTAAATGCGTTAGGCTACCCTATACGCCCTAATGAGGTTGATTGTGCTTATTATTTAAGAACTGGACACTGTAAATTTGGGAGCACTTGTAAATTCAACCACCCTCCGCCCACAAACTTGATGGCTCCCCTTCGTGGTTCCTCAGTTTACCCTGCAGTCCAATCTCCTTCTGCTGGTCAGCAGTCATATTCTTGGTCTAGAGCGTCTTTTATTGCCAACCCACCATGGCAAGATCCTTCTAGTTCTAGCTTTGCCTCGTTAGTTTTGCCTCAGGGCATGGTGTCGGTTCAAGGATGGAACACTTACAGCGGTCAGCTTGGCTCAGTTTATTCATCTGGAAGTCGAAATCAAGTGGCAGGAAATGATCACAACTACAGAGATCTACTGCAGAATGAGGCGAAAGAGTCGGGGTTTTACGCATTGCCGAGGGAGAATGTTTTCCCTGAAAAACCCGGCCAACCTGAGTGCCAGTTTTACATGAAGACTGGAGATTGCAAATTCGGTTCAGTTTGCAAATTTCATCATCCTCGAAACAGGCAAAACCCTGCTCCAGACTGTGTCTTGAGTCCTATAGGACTTCCACTGCGACCGGGAGAACCACTATGCGGATTCTATTCTCGTTACGGAATCTGCAAGTTCGGTCCAAGTTGTAAGTTTGATCATCCGATGCAGCGGGTATTCACGTCGATGAATCCAGAAGAAACACAGCTCGGGAATCTGCTGGGATCGTCGGCATCGACAAACTTGTCATCTGAGGATGAACTTGTTGAGACACCATCAGCTGCTAAAACCCAGAAGGTTCTCTGTGTCTGA ATGTCCTCTGCGTCGCCTTCGTCATCGGCGCCGGAGATGGAGCTACAACCGCCGGCAATCGTCGATGGTGACCCGTCAGCGTTATCCGCCGCCGTCTGGGATTGGGGAGATCTCCTCGACTTCGCCTTAGACGATCGGCTTCTCGTCTCCTTCGACTCCGATCAACCTCCGTTCTCCGCCGCTCCTCCCCCGCAGAATCAACCGCTGGAATCGGAATCGGATCCTTCCCCGGGCTCGAGTTCGGGTTCGGATCGGGTGAGGAAGCGGGACCCGCGGTTGACTTGTTCGAATTTCCTGGAAGGTAGGATCCCATGCTCGTGCCCGGAGATCGACCAGAGATTGGAGGAGGCGGAGCTTCCGACGAAGAAGCGGGTCCGGGGCGGCGGGCGTGGCGGCTCAGGCTTGGCCCGGTGCCAGGTCCCGGGTTGCGAAGCGGATATAAGCGAGCTCAAAGGTTACCATCGGAGGCATAGGGTTTGCCTCCGGTGCGCGAACGCGAGCTCCGTCGTGCTCGACGGAGAGACCAAGAGATACTGCCAACAGTGTGGAAAGTTTCATATGCTGTCAGATTTCGACGAAGGTAAACGCAGTTGTCGAAGAAAGCTTGAGCGTCACAACAACAGGCGTAAAAGAAAACCCGTAGATAAAGGAGACGGAGATGAAAAGCATCAGCAAGCAGCATTGCAGAATGAGAACAGCGTAATTGATGTTGACGATGAAAAAGACAATATCTGCTCAATTGACCAGAGAGCAGAACAAGAGGCTTCACTGGATTTTGAATATGAAAAAAATTGTGGGCAGGGAGCTGTACCTATTCCCCAGAGTATCAATGCAGATAGTTTTGTATCTTTTGCAGCTCAGACAGATGAAGGAAAGAATGACACGAAATTTGAACATTCACCTCTCTATGGTGACAACAGAAGTGCTTACTCATCTGAGTGCCCAACTGGTCGAATCTCATTCAAACTTTACGATTGGAATCCAGCGGAGTTCCCTAGGAGACTGCGGCATCAAATATTCCAGTGGCTGGCCGCCATGCCTGTGGAGTTGGAGAGCTATATTCGTCCTGGATGTACGATATTGACTGTCTTTATTGCAATGCCTGAGATTATGTGGGCTAAGTTATCTAAAGATCCCGTGGCTTATCTGGATGAGTTTATTCTTAAACCTGGAAAGATGCTGTTTGGGAGAGGCTCGATGACTGTTTATTTGAACAACATGATTTTCCGTCTTATGAGAGGTGGAACCTCTGTCAAGAGAGTCGATATAAAATTACAGGCCCCAAGACTTCAATTTGTCTACCCAACATGTTTTAAAGCTGGAAAACCAATTGAACTCATCATTTGTGGACGGAACTTCCTGCAACCAAAATTTCGGTTTCTTGTCTCTTTTTCTGGGAAGTACTTACCTTACAACTATTCTGTTATTTCTTCACCCAACCAGGACGGGAAGAGTTCTCGTTGTTGTTGTAATAAGTTGTACAAGATCAATGTTGTGAACTCCGACCCAAATCTCTTTGGTCCTGCATTTGTCGAGGTTGAGAATGAATCTGGCCTTTCAAATTTCATTCCTCTAATTATTGGAGATGAAGCTATTTGCTCCGAAATGAAACTAATAGAGCAGAAGTTCAATGCTACACTCTTTATTAAATTAACCAGTCAGATAACCCGGAGATATGATCGGCAGAGGCAAACAGCCTTTTCTGGGCTCCTGTTAGATATAGCATGGTCAGTTAAGGCGCCCACTTCAGAATGCAGGGGACAGAACATGAATCTTTGTCAGATACGGAGATTCAATCGGGTGTTGGATTATCTGATACGGAGTAATTCGGTTTCCATATTGGAGAAAGTGCTGCAGAATCTGGAAACTCTGTTGAACAAAATGGAACCTGACTCTGTGATTCACTGTACAAGTGATAGCGACGTGAGACTCTTACATGAAAATATGAATATGGCCAGAGACATCAACAGGAAACGTCAGAGCCATGAACAATCAATGACAAACTTTGGAAACGATCTTCCTTCATCAAATTGTGATTGTGGCTGTGACTGTGGCTGCGGTTGCAAAAGCAGTTTCCAGAAGGACGCACCATCACGAACATCAAACATTAATCAGGATCCAGAGGCAGGATTAGTTTCCAAGCAGGGGAAGCAGCGGGTGGCCAGGAGAGAAACTGACCCTCTTTTAAGCAAAGAGTTTGTAATGAACGTGGACGGTGTCAGAGACTGGCCGAGGAATTCTTGCAGCCCGGTATACCCTGTCCAGGCATTTAGATCCCGTCCAACCGCATTCATAATCACAACACTCATCCTCTGTTTCACGGTATGTGCGGTTCTGTACCATCCAAACAGGGTCACGGCATTTGCAGTGGCCGTCAGAACGAGATTGGCTCACGAAACTTGA ATGGCGGGGGATCCAATGTCCGACGCTGACGACTCGTTCCATGACCCTTACGACGGTCCTTTCACCGACGAAGAACTCTTCAATATCATCTCAGACCCCGACCCCAGTCTCCTGGATTTGTCTCTGAATGATCCAATCATTGGCGATGCTAACCCTCCTCTTCCTCCTGCACCAATGGAGACAAGCATTAATGTTAACAATGTTGTTGGGGACCCGCCATTGCCCGAATTCCCTCACGGATCGACTAACGATCAGACTCTGTCGTGGACGAGGATCGGAATGTTGGGCGATGAAGCCGTTGGAAATGTCGGAGATGGCAACAACAATCTCGAAGGGAGTAGTTGGGAGATTAGGGGTGATCATCTCCATCAACATCAACATCATCAGCATCAGCATCATCCTCCTCATCCTCACGATCAACATCAATATCAATATCAACAACAACAACAACAACAACAACAGCAGCAGCAGCAGCACCAGCAGCAGCATCAACATCATCATCATAATGCTGAGAGTTATGAAGCGGGTGAGTCGTCTTCGATGCCAGTCTCTGTTCGTCCACCACGGGGGGAGGGAGGCGCTTTCGTGTGCAATTGTTGCCAACCCCTTCGAGAACTCATTCACACCAATGGTCAAGAGGTTACGAGACTTGATATCCACGGAAGAATCGGGATGATCTGCCACGCGAATCTCATCATCCAACCGGACATAGCAACTTCCGAGGAGTATGGATACCAAACATTCCATTTCGGTAACCAAAGCAACGAGGAAGTGAAGGAGTTCTTAGAGCAGTACTGTGCAGAGAGGGCTCAGGCCGGTTTCTGGATGGTTCAAGATTCGCTCGCATCTTTCTATCAGATGATGAGCATTGGTCTAGACATGGACCCGCACGGCTTGGAGCCTTTCGACACCGGTTTGCAAAACTCCGCTTCTGATGTGGTAGTACCGATAGCGTCAACGTCTGCCGCCACTGTGTCTGCTGCGCCTGCGCAAGAGGAGCCGCCGCCGGTGAAGAACGAGCAGGCGGGACCGTCAAAGGAACGAGAGAAGAAGAAAACTCCTCTCGCTGCTCAGAGGGAAAGAACGGGGAAGCTAACGCTGAAGGACATTGGAAAATACTTTCACCTTCCGATAGAAGAGGCGGCCAGGACGATGAAGCTGTGCCCTACGGTGGTCAAGAAGATTTGCAGGAGAGGAGGGTTAGCAAGATGGCCTCACAGAAAGATAAAGAGCGTGGAGAGGAAGATGTCGACGTGGAGGAGTGTGATAAGGACGACAAAGAAGCCGGAGGAGAGGGCTCGCGCTGAAGCCGAGATCCAAAAGCTCGAGGCTGAGATCGATAAGATTCGTTCTGACGCCCTTAGAGACTTTGATTAA ATGAAGCCAAGTGATGGCTCAGGGCTTTATTACCTCGTCCCTCCGAGCCCGTCTCCTCATTCGGCTTATTTCAGCACAATAAACAACATGCAAGACTTTCACTTAAACCAGTATCTGAACCCTTCATGTAATTTCAGCATCCACCCCCAGGTTCAGGAACTCAATCTCCAGTCCCCATGTTTCAGCAACAACTCAACCTCGGATGAAGCAGATGAGCAGCAAGTGAGCATCATCATCAACGAGAGAAAGCAGAGACGTATGATATCTAACAGAGAATCAGCAAGAAGGTCAAGAATGCGCAAGCAAAGACACCTAGATGAACTCCTCTCACAGGTGGCTTGGCTCAGGAAAGAGAATCATCAGCTTATAGATAAACTGAACCAGGTCTCAGAAAGCCATGACCGTGTCCTGCAAGAGAACACACAGCTTAAAGAAGAGACCTCAGAGCTCCGCCAACTCGTCTCAACCATGAAGCTGAGAAGCCAATATTCTTACTTTGAAGACTTCCCCTCCAATTAG ATGCCCCAAGAAGAAGGGGTTTTCATCCACAAGCCAAAATCAGACGACAATCCCACGATTCCCGATCTCTCTCTTCACATCAGTCTTCCTGATAATGTTAATAATCTTCCCTCCAAGTCATCAGGATCTTCTCCGAGATCCCATCCCGACCACAACATCAGCAGAATCCAACTCTCCTTATCTCATCCGGCAAGCAACTCAAGATTCTTCCATGGCGTTCTTGACACCGATGACCACACCACCTCTCATCATCATCGTCGTCACCAACTTCTTAATCAGCAATATTATCCCCTCAATGGCGGCCTTCACGGCTTGGATCGCCATCAGATTAGCCAAAGGGTTTCGACCATGATTGATGCTCCTTCGACCTCCGAGAATCTACACCGTCCGATCAGGGGTATCCCGGTCTATCACAACCGTTCATTCCCTTTCTACCATCAAATGCCCTCTCCATCATCATCATCATCATCATCATCTTCTCCCTTGCCTTGCTTTGGTGGAGAGTTGGATCAAGATTCGATCTTGAACTCGAGCAATCGGCCTTTTCAGGGTTATAATAACACGTATCGGTTACAAGGCTCTTCCAGGCTCAAAGGGGTTGTTTCTTCTATAGAGGCATTGAAATCATCACATCATTTGCATCAAAATCATCATCACCATAATCATTATGGAATTGGATCCTCGGATTCTTTGTCTCATGGAATGGTTAGATCGAGGTTCTTGCCTAAGCAACCGACCAAGAGAAGCATGAGAGCTCCGAGGATGCGTTGGACGAGTAGTCTCCATGCTCGATTCGTTCACGCCGTTGAACTTCTCGGTGGCCATGAAAGAGCAACTCCGAAGTCGGTTCTCGAGCTCATGGATGTAAAAGACTTAACCTTAGCTCACGTGAAGAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTAACAAGCCTGCAGCTTCCTCAGATGGGTCTGTGGAGGAAGATATCCCCACTTGTGGAAATGGAGATCAAAGGGCTCAATCTGATGCCTCTCTTCAGCAAGAAATTGACCTCACTTCCACCAATTCCACTCCTCTCTGGAGTAATTCCTCAAGGGAGGCATGCTCAAGCGACATTGATATGATGAGAGGAGAAACATCAACATCATTCAGTCACCAACAAATATCGACAATACAAGCCGAGAATCGTATCTCAAGTGATGAAGCAAATTATAAGTGTGGAGGAGGTCACAGCAAAAACAATCCGAGTCTGGAGTTCACTTTAGGCAGACCAGATTGGCACCGAAAATGA ATGGATTCTGACATAATGAACTTGATGATGCAGCAGATGGAGAAGCTCCCCGATTTCTGTAACACTAACCCTAGCTCCCATAACGGACCTCCACCATTTTTCCCTTCCGACCAAACCAACCTCATGCTCTCCAACTCCAACTCCCACCAGTTATTCTTCAACCCAACCCAGATCCAGTCCGACCCGATGACCCAAGAACCCGGTTTCAGATACGGGACCGGGTTGCTCACCGCTCCATCCACCTCCTCTCTCCCGGCCATATCCCCCAACACGTACCCTTCAATGTTTCTCGACAAGAGAGGCTCAAATGGTAACAGCAACAGCAACAATAACAGCAGCAACATGGCTGCGATGAGGGAGATGATCTTCAGGATCGCGGTGATGCAACCGATACATATCGACCCTGAGTCAATAAAGCCACCGAAGAGGAGGAACGTGAGGATCTCCAAGGACCCACAAAGCGTCGCGGCTCGTCACCGGAGGGAGAGGATAAGCGAGAGGATCCGCATTCTGCAGCGGCTTGTCCCAGGAGGGACGAAGATGGATACTGCATCTATGCTCGACGAAGCCATTCATTATGTGAAGTTCTTGAAGAAACAGGTGCAGTCTCTGGAGGAACAGGCAGTTGCCAACGGCGGCGGAAGGGTGGTGATGGGTGGCGGCGGAGTTACGGGGGCTCCGGCGGTGGCTATCGCCGGAATGGGTGGAGGATACGGTGGTGGGATGGTGGTGAAGGGTTGTGGGGCAATGGGGTCTCATCAGATGGTGGGCAATGCACAGATACTTAGGTGA
Protein Sequence:
- >105585|Micromonas_sp._RCC299|GATA|105585
MATSGQQPPEAAHAPPQSAAQAQANAYHEQMKANYAAAYAANPYLLHPQIMAMNAFASAANPHPPNLVEVQTLLKRYEHMTQGMQKVPSLKELNARAPPYAPPGVADAAHINALPPAVKVPPAVAAPNEEPNAVAGAGEEDAEGMPAPCAGKVCANCRTSKTPLWRNGPLGPKTLCNACGVRFKLGKLPPPGGWPPGHVPPPAPPRKRPALLDSNGQPVKRSKAEKGALLEKDGEKVKKKRRPRLAPDLEAEEGGEYLRAGKVAKTTALLTDYDGAVLLMVLAGMYSH*