Gene Details:
- Gene ID: OMERI01G24150.1
- Gene Family: E2F/DP Family
- Description: E2F/DP Family protein
- Species: Oryza meridionalis
- Source: E2F-DP family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:1.10.10.10
- SuperFamily: SSF144074
- Pfam: PF16421
- InterPro: IPR011991 IPR032198
Annotation Proteins:
- Refseq: XP_015631692.1 — transcription factor-like protein DPB isoform X2
- TrEMBL: A0A0E0C621 — A0A0E0C621_9ORYZ; Uncharacterized protein
- STRING: OMERI01G23370.1 — (Oryza meridionalis)
Gene Ontology:
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0006816 — Biological Process — calcium ion transport
- GO:0009845 — Biological Process — seed germination
- GO:0010119 — Biological Process — regulation of stomatal movement
- GO:0019722 — Biological Process — calcium-mediated signaling
- GO:0034220 — Biological Process — ion transmembrane transport
- GO:0080141 — Biological Process — regulation of jasmonic acid biosynthetic process
- GO:0000325 — Cellular Component — plant-type vacuole
- GO:0005667 — Cellular Component — transcription factor complex
- GO:0005774 — Cellular Component — vacuolar membrane
- GO:0005794 — Cellular Component — Golgi apparatus
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005245 — Molecular Function — voltage-gated calcium channel activity
- GO:0005509 — Molecular Function — calcium ion binding
Family Introduction:
- E2F transcription factors are a family of proteins that share a related DNA-binding domain and that bind to overlapping sets of target promoters. Most E2F proteins associate with a DP protein and form heterodimeric complexes that bind to DNA in a sequence-specific manner. E2F proteins control the temporal expression of genes that are needed for multiple processes during the cell cycle. Consequently, the level of E2F-dependent transcription is important for cell proliferation.
- Different types of E2F complexes either activate or repress transcription. E2F repressor complexes suppress the transcription of their targets in quiescent cells, in differentiated cells and during the G1 phase of the cell cycle. When cells enter the cell cycle and proliferate, these repressors are disrupted and/or replaced by activator forms of E2F that promote gene expression.
Literature:
Sequences:
CDS Sequence:
- >OMERI01G24150.1|Oryza_meridionalis|E2F/DP|OMERI01G24150.1
ATGAAGATAGTGCTCAAGGTGCCGATCACCTGCAAGAAGTGCAAATCCTGCATCCTGCAGATCGTCTCAAGGAACAAAGGGGTCAAGTCGCTGACGTTCGACGACGAGAAGAGCACGCTGACGGTGATCGGGGAGGTGGACGTGGTGGTGATCGTGGACAAGCTCCGGCACCCGAAGAAGGGGAAGGAGAAGAGGGAGGGGTACATGGTGGAGGTGATGGCGGTGAGCGACGAGAAGAAGGAGGCCGAGGAGAAGAAGAAGAAGGACGAGGAGGAGAAGAAGAAGAAGGAGAAGGAGGAGGAAGAGAAGAAGAAGAAGGAGTGCGCCGAGAAGCTCAAGCAGTGCGCCGAGCTGCAGCAGTGCTGCAGGGCGTGCCGGCCCTACTACGTCGCCGTCGACGACCACCCAGGCTACTCCTGCACCATCCGTGAAAAAAAAAACCCAGATTTTTACTCGGGCGACAAAGAAAAACCCCACATTTACGGCTTTACCCTCTCTCCCTCGAAACGCCCACGCATCGCTCGAGCCGCAATGGCGCCTCCCTGCGGCGATGCCGCGGCGGCTGCCTCCGCCGCGCCCGGCCTGGCCAACCTGCTCATTCGCGAAGGCGCCGGCCTCCCTCCGCGTCCCGAACGCGGCGGCGGCGGCGGCAATGCGGCAGAGAGGGAGGAGGGCGGTGCGAACAGGAACGGGAAGAAGGAGAAGGCCGGGGCGCAGAGGATCACCGGGTGGGGGCTCCGTGAGTTCAGCAAGATAGTTTCTAAGAAAGTTGAGGCCAAAGGAAGAACCACATATAATGAGGTTGCCGATGAGATTTTTGCGGAGCTGAAGTCCATTACGCAGAACGGTCTGGAGTTTGATGAGAAGAATATTAGGCGGAGGGTATATGATGCTTTCAATGTGCTCATTGCAATTCGTGTTATTGCAAAAGATAAAAAGGAGATAAAGTGGATGGGCCTTACTAATTATAGATACGAAAAGATACAGAAGTTGGAGGAAGTTCACAAAGAACTCATCACCAGGATCAAGAATAAGAAGAAGCTTCTCCAGGAAATTGAAAAGCAGAATATTACATTACGCAACCAGGCTAGTCAGAGGCCAGCAGAAAGTGTTAATGGCATCCTCCTTCCGTTCTTATTGATCAAGACATCCCGAAAAGCAAGGGTGGAAATTGAGATTTCGGAAGATTCGAAGTTTGCACGGTTCGACTTCAGCGGTGCACCATTCACCATGCATGATGATGTATCAATCCTTGAAGCCATCAGGCGTAACAACAAAGGAAGAGCTGGCCTCTCCATTCACCCTTAA
Protein Sequence:
- >OMERI01G24150.1|Oryza_meridionalis|E2F/DP|OMERI01G24150.1
MKIVLKVPITCKKCKSCILQIVSRNKGVKSLTFDDEKSTLTVIGEVDVVVIVDKLRHPKKGKEKREGYMVEVMAVSDEKKEAEEKKKKDEEEKKKKEKEEEEKKKKECAEKLKQCAELQQCCRACRPYYVAVDDHPGYSCTIREKKNPDFYSGDKEKPHIYGFTLSPSKRPRIARAAMAPPCGDAAAAASAAPGLANLLIREGAGLPPRPERGGGGGNAAEREEGGANRNGKKEKAGAQRITGWGLREFSKIVSKKVEAKGRTTYNEVADEIFAELKSITQNGLEFDEKNIRRRVYDAFNVLIAIRVIAKDKKEIKWMGLTNYRYEKIQKLEEVHKELITRIKNKKKLLQEIEKQNITLRNQASQRPAESVNGILLPFLLIKTSRKARVEIEISEDSKFARFDFSGAPFTMHDDVSILEAIRRNNKGRAGLSIHP