Gene Details:

• Gene ID: Solyc02g076850.1.1
• Gene Name: LOC104645845
• Gene Family: Dof Family
• Description: Dof Family protein
• Species: Solanum lycopersicum
• Source: Dof family gene from PlantTFDB

Protein Features:

• ProDom:  PD007478
• Pfam:  PF02701
• PROSITE profile:  PS50884
• PROSITE pattern:  PS01361
• InterPro:  IPR003851

Annotation Proteins:

• Refseq:  XP_010316809.1  — dof zinc finger protein DOF1.5
• Swissprot:  O22967  — CDF4_ARATH; Cyclic dof factor 4
• TrEMBL:  A0A3Q7FPW3  — A0A3Q7FPW3_SOLLC; Uncharacterized protein
• STRING:  Solyc02g076850.1.1  — (Solanum lycopersicum)

Gene Ontology:

• GO:0045892  — Biological Process — negative regulation of transcription, DNA-templated
• GO:1902455  — Biological Process — negative regulation of stem cell population maintenance
• GO:0003677  — Molecular Function — DNA binding

Family Introduction:

• Dof (DNA binding with one finger) family, a particular class of zinc finger domain TFs characterized by a conserved region of 50 amino acids with a C2-C2 finger structure, associated to a basic region, that binds specifically to DNA sequences with a 5’-T/AAAAG-3’ core. Dof proteins have been reported to participate in the regulation of gene expression in processes such as seed storage protein synthesis in developing endosperm, light regulation of genes involved in carbohydrate metabolism, plant defense mechanisms, seed germination, gibberellin response in post-germinating aleurone , auxin response and stomata guard cell specific gene regulation.

Literature:

• Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families.   DOI:  10.1186/1471-2148-3-17 ;  PMID:  12877745

Sequences: