Information report for Itr_sc000277.1_g00011.1
Gene Details
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Functional Annotation
- Refseq: XP_019195276.1 — PREDICTED: cyclic dof factor 1-like
- Refseq: XP_019195277.1 — PREDICTED: cyclic dof factor 1-like
- Refseq: XP_019195278.1 — PREDICTED: cyclic dof factor 1-like
- Refseq: XP_019195279.1 — PREDICTED: cyclic dof factor 1-like
- Refseq: XP_019195280.1 — PREDICTED: cyclic dof factor 1-like
- TrEMBL: A0A0D3MTJ8 — A0A0D3MTJ8_IPONI; CDF2
- STRING: XP_010088142.1 — (Morus notabilis)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- Dof (DNA binding with one finger) family, a particular class of zinc finger domain TFs characterized by a conserved region of 50 amino acids with a C2-C2 finger structure, associated to a basic region, that binds specifically to DNA sequences with a 5’-T/AAAAG-3’ core. Dof proteins have been reported to participate in the regulation of gene expression in processes such as seed storage protein synthesis in developing endosperm, light regulation of genes involved in carbohydrate metabolism, plant defense mechanisms, seed germination, gibberellin response in post-germinating aleurone , auxin response and stomata guard cell specific gene regulation.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Itr_sc000277.1_g00011.1|Ipomoea_trifida|Dof|Itr_sc000277.1_g00011.1
ATGCCGGAAGTGAGCAAAGACCCCGCGATTAAGCTGTTTGGGAAGACTATCCAGTTGCCGGATGCTCCGGCGCCGGCGCCGGCGACGGAGATGGATGTCGACCCCGGCGGGGGAGCAGCTTCATCTCCTCCTCCTGCTGATGAATTCTCAGCTAAAGATAGTTCTTGTTCAGAAGCTGAGGGCGGAGAGGATGAACAACTGCAAAAGAATGAAAATGGAGAAAGTGAAGAGGATGAAGGAACAGTGTTATTGGAAGGGGAAGAGATAATGGATGAGAGTGTAGATGAAATGAGGGATGGGTTAAAAGCACCACCTGTTGATGAAGATGGTGGTGGAGGGACTGAGATTTCAACAACTGAGGAAGAGGGGAAAATGAGTACTGGAAAAGATAAGACTCTGAAAAAACCAGACAAGATAATTCCATGTCCTAGGTGTGATAGTATGGAGACCAAGTTCTGTTATTTCAACAACTACAACGTGAACCAGCCGCGCCACTTCTGCAAGAAATGCCAGAGATATTGGACGTCGGGTGGGATGACGAGGAATTTGCCTGTTGGCGCTGGGCGCAGAAAAAGTAAGAACTCGGCTGCTCATTATCACCATTTGAATGCTGTGAAGTCGTTTCAGAGTGCTCGTGTAGACCATCCCGAGAGAATCCAACACCATGCTCTTAAGGCCAATGGCAAGGTGCTTACGTTGGCCTCTGATTCGCCCCTCTGTGACTCTGTGGCCTCAGCGTTGAACATTGCAGAGAAAACTGCAGGGAATGGGTTTTACAAGCCAGTAGAGTTAGGAATCCCGGTTTCATATGGAGCTGGGGATAATGGAGCTGACCATTCAAGTGGTTCATCATCAAGTACAAAGGATGATGTTTGCAAAAATGGGTTGCCCGACATGATGAGACAGAACTACCATGGCTTCGCTCCTCAATTACCGTGCTTTCCAGGTCCTCCTTGGCCATATCCATCCAATGCTGTTCAGTGGAGCTCTGCAGTTCCTCCACCTGGTTGCTTTTCTCCCGGCTTTCCCATGCCATTTTACCCCCCAGCAATGTATTTGGGTTATACCATTCCATGCTCTTGGAATGCGCCTTGGGTGAACAGACCTGTTGCGCCCCAACAGCACACGTCTTCTGGCCCTAATTCTCCAACCTTAGGGAAGCACTCAAGGGATGACAACGCGGTGACACCAGCCAGCATCAAGGAAGGGGAGCCACCCAAAGATAGTAATCCAGAGAAGTGTCTGTGGGTTCCTAAAACTTTGCGGTTTGATGATCCAGAAGATGCTGCAAAGAGTTCCATATGGGCTACGCTGGGAATAAAACACGATAGAGTTGATTCGATTAGGGGTGGCGCTTTTAAGGCCTTCAAGTTGAAGGATGACGAGAAGAGTCATGCTTCAAAGAACTGTAGAGTATTAGAAGCCAATCCAGCTGCATTATCCAGCGAGCAACCTTGGGTTATGACTTTACGATCATATAATATTTTCTCGAAGATCAGACAACTAGATGCGGATTTCCAACTTTTTGTTCTGAGAAAGGAGAGGTTCTATTCCATAGATGAGCAGAGGATTGGCTCGTTGGAAGCAACCGGAGGATGCCCGAGCCCCGAGGCTGGGCAGAGACGCGGAAGAGCCACAACGAAGGTTTTATCACGACATGCATTAGTTCTTGGGAAAGCACACCAGAAACCAGAACTCTCTGGTCTGTACTTCCCAGAAGTTTACAAAAGCCAAGTAAACTTTTCTTATGATCTCTTTCTCTCCTGGAAGATGATGGGACCATTGCACCATGCAAACTCTGCTGCTGTTTCATTTCAGGAGAAATGGGTAGTGTATCAGAGAGATTATGAGCAAGCTGGGCCGAACGTCCACTCTCAACCTGCTCTTCTTTCTCCTCCTCCTCCTTCGTCTCCTCCTCTGGCATCACCGCCATCACTGCAATACTAG
Protein Sequence:
- >Itr_sc000277.1_g00011.1|Ipomoea_trifida|Dof|Itr_sc000277.1_g00011.1
MPEVSKDPAIKLFGKTIQLPDAPAPAPATEMDVDPGGGAASSPPPADEFSAKDSSCSEAEGGEDEQLQKNENGESEEDEGTVLLEGEEIMDESVDEMRDGLKAPPVDEDGGGGTEISTTEEEGKMSTGKDKTLKKPDKIIPCPRCDSMETKFCYFNNYNVNQPRHFCKKCQRYWTSGGMTRNLPVGAGRRKSKNSAAHYHHLNAVKSFQSARVDHPERIQHHALKANGKVLTLASDSPLCDSVASALNIAEKTAGNGFYKPVELGIPVSYGAGDNGADHSSGSSSSTKDDVCKNGLPDMMRQNYHGFAPQLPCFPGPPWPYPSNAVQWSSAVPPPGCFSPGFPMPFYPPAMYLGYTIPCSWNAPWVNRPVAPQQHTSSGPNSPTLGKHSRDDNAVTPASIKEGEPPKDSNPEKCLWVPKTLRFDDPEDAAKSSIWATLGIKHDRVDSIRGGAFKAFKLKDDEKSHASKNCRVLEANPAALSSEQPWVMTLRSYNIFSKIRQLDADFQLFVLRKERFYSIDEQRIGSLEATGGCPSPEAGQRRGRATTKVLSRHALVLGKAHQKPELSGLYFPEVYKSQVNFSYDLFLSWKMMGPLHHANSAAVSFQEKWVVYQRDYEQAGPNVHSQPALLSPPPPSSPPLASPPSLQY