Information report for 902497
Gene Details
Functional Annotation
- Refseq: XP_002881324.1 — cyclic dof factor 4
- Swissprot: O22967 — CDF4_ARATH; Cyclic dof factor 4
- TrEMBL: D7LGH3 — D7LGH3_ARALL; Dof-type zinc finger domain-containing protein
- STRING: scaffold_401998.1 — (Arabidopsis lyrata)
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:1902455 — Biological Process — negative regulation of stem cell population maintenance
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- Dof (DNA binding with one finger) family, a particular class of zinc finger domain TFs characterized by a conserved region of 50 amino acids with a C2-C2 finger structure, associated to a basic region, that binds specifically to DNA sequences with a 5’-T/AAAAG-3’ core. Dof proteins have been reported to participate in the regulation of gene expression in processes such as seed storage protein synthesis in developing endosperm, light regulation of genes involved in carbohydrate metabolism, plant defense mechanisms, seed germination, gibberellin response in post-germinating aleurone , auxin response and stomata guard cell specific gene regulation.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >902497|Arabidopsis_lyrata|Dof|902497
ATGGCGACTCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACCATTGCATTTAACTCTCAGACAATAAAAAATGAAGAAGAGAAACAACCACCGGAGCAAGAGGCTACAACAACCGTTAGATCATCATCATCATCGGATCTGACGGCCGAGAAGCGTCCAGACAAGATCATAGCATGTCCAAGATGCAAGAGCATGGAGACAAAGTTCTGTTACTTCAATAACTATAACGTTAATCAGCCTCGACACTTTTGTAAAGACTGCCACCGTTACTGGACCGCCGGTGGTGCACTTCGGAACGTTCCCGTCGGCGCCGGTCGTCGGAAGTCCAAACCACCAGGCCGTGCCGTGGTTGGTATGCTTGGAGATGGAAATGGGGTTCATCAAGTCGAGCTTATAAATGGCTTGCTCGTTGAGGAGTGGCAGCATGCCGCAGCCGCAGCTCACGGTGGTTTCCGGCATGATTTTCCTATGAAGCGGCTCCGGTGTTACTCCGACGGTCAATCTTGCTGA ATGCTGAATACTCCTGGGTCCTATGATTCTTCTCAGACATTCATTGATACAACCAACGAGTCCAATAGTTTGGGGTTGTTTTTGCATCCACCAAGCTCCATAAACTACTATCCCCCAACGGCGCCATCTACCTTCAACAACGATGGTAATGTTGCATCGAACACATCCTCTTCAAGTAAAATATATGACCTCCAATTTTGTAAGCACGGTGGCAATGTTACACCAGACTGGAATGTAACCAGTGCGGCAGACTATCATGAGCAGAGTTGGTTCAACTCAGATATAACCCTCAACTACATAAACAATCTGCTAATGCAGGAAGACCCTCAATTACATCATGGAGAATCTGCCCTTAGAGCTATGGAGGAGCCTTTCTACAGACTGCTTGAACAGAACCAACAAGCTTATCCTCAGCTGCGAGCACTTCTTAGCTGTGATTATCTAAAGAACCTCGATGATAGCACCAGCAAAACTCGTTGGGAGTTATGCAGTAGCTACTCTGTTACTACTGACTCGGGCAATAATCATTCCAATGACAACTTACAGGGTCCTGAAACTCCATGGAGCTTGTCTGCCATTGTTGGAGAGACTAAAAAGTTCACTCAAGATACATATAGCAGGAACCTTGGTTTGAATGTCAGTGATCTTTCCATTGCCGAAAACTCTAGCAGTGGTGATCAATACGTTCAACGTCGAAAAAGTTATCCATATACGGAAGATTTCGATTTATTAGAAGGAAGAAGTAACAAGCAGTTTGCTTTTTCTCTGGACGAGCCAATCCGAGATGAGATGTTCGACAAGGTTTTACTCTACTCTGGGCATCAGCCCTTAGATGGAGGTATTCTTTTGCAAGAAACCACGGAAACCAAATCAACTGAAAATTTACAGAATAATCAAGGCAGAACATCAGCCTGGCGAAAGATAAAAGGTAAGAAACAACTGAAGAAAGAGGTGGTGGATCTGAGAACCCTCCTTATCCATTGTGCACAAGCAGTTTCTGTGAATAACCATACCTTAGCACGTGACATACTGAACACGATAAGGCAACATTCGTCGGCAAGTGGGGATGATTCCCAGAGGCTATCATTTTGCCTAGCGGATTGCCTCGAGGTACGATTAGCTGGAACTGGGAGTCAGATTTATCACAAGTTGATTTCGGAAACAAAAACTGCAGGGGACATGTTGAAGGTATTCCATTTATGTTTATCAATATGTCCTTTCTTATGGGCACCATACTATTTATCAAATAAAACCATCCTTGATGTCTCAATGGGAGAACCACGGTTACACATCATTGATTTTGGCATTTGCTTTGGTTTTCAATGGCCATCACTATTTGAGCAACTCTCAAAGAGGGAATATGGGCCTCCTAAGGTTCGAATCACAGGTATTGAGTTACCGCAGCCAGGTTTTCGGCCAAATAGAATGACTATGAACACAGGGCGTCGATTAGCCGAATATGCTGAAATGTTCAATATACCATTTGAATATCAAGGAATGTCATCAAAATGGGAAACCATACGTGTGGAAGATTTCGACATCAAGAAGGATGATGTGCTCATAGTCAACTGCATATACCGAATGAAGAATTTGGGCGATGAGACAGTATCAATTAATAGTGCAAGAAATAGAGTGCTCAATACCATAAGAATGATGAAGCCAAAAGTTTTTGTGCATGGAGTTCAGAATGGATCATACAGCACCCCGTTCTTTTTAACACGTTTTAAAGAGGTCATGTACCACTACAGTGCAATGTTTGATATCCTTAATAAAACTGTTCCACCAGATAATGAGGCAAGAATGATCCTAGAGAGGGAAATCCATAAGTCAGTACTTCTTAATGTCATTGCATGTGAAGGATCAGAAAGGATTGAGAGGCCAGAGAGTTACAAGAAATGGAAGGCAAGAAACCTGAAGGCCGGCTTTGAGCAGATCCCGTTGAATCCAGACATTGTGAAAAGAACAAAAGATATTGTGAAACGGTTGTATCATAAAGATTATGTTGTCGACGAAGATGATCAATGGCTCTTATATGGATGGAAGGGAAGAATAATCTATGCAATATCCACATGGAAACCAAATGCGCCAAATGATGGCAATTAA
Protein Sequence:
- >902497|Arabidopsis_lyrata|Dof|902497
MATQDSQGIKLFGKTIAFNSQTIKNEEEKQPPEQEATTTVRSSSSSDLTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKDCHRYWTAGGALRNVPVGAGRRKSKPPGRAVVGMLGDGNGVHQVELINGLLVEEWQHAAAAAHGGFRHDFPMKRLRCYSDGQSC*