Gene Details:
- Gene ID: Rsa1.0_00181.1_g00005.1
- Gene Family: CPP Family
- Description: CPP Family protein
- Species: Raphanus sativus
- Source: CPP family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: XP_018433667.1 — PREDICTED: protein tesmin/TSO1-like CXC 3
- Swissprot: Q8L548 — TCX3_ARATH; Protein tesmin/TSO1-like CXC 3
- TrEMBL: A0A0D3ABH9 — A0A0D3ABH9_BRAOL; Uncharacterized protein
- STRING: Bo1g104900.1 — (Brassica oleracea)
Gene Ontology:
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction:
- CPP-like (cystein-rich polycomb-like protein) proteins are members of a small transcription factor family whose typical feature is the existence of one or two similar Cys-rich domains termed the CXC domain. The members of this family are widely present in plants and animals but absent in yeast, and the CXC domains of CPP-like proteins show high conservation across species from amoebae though plants to mammals (Andersen et al. 2007; Riechmann et al. 2000). CPP-like genes play an important role in development of reproductive tissue and control of cell division in plants.
Literature:
- Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice. DOI: 10.1007/s00239-008-9143-z ; PMID: 18696028
Sequences:
CDS Sequence:
- >Rsa1.0_00181.1_g00005.1|Raphanus_sativus|CPP|Rsa1.0_00181.1_g00005.1
ATGGATACACCTCAAAAAACAGTAACCCAGATCGAGACTCCCGTTTCTAAACTCAAAGTCGAGAACTCTCCGGTGTTCAATTACATAAACAGTCTGTCTCCAATCACAACTGTCAAATCCACCTCCACTGCTCAGACGTTTAGCTCTCTCACTTTCACATCTCCTCCTCCTGTTTTCACTACCCCTCACGTGGTCGCTTCTCACAAAGAATCTCGTTTCAGAAGCCATAGTAACTCCTCTGATCCTTCCAAAGTTGGCCCTGAAGCTTCCACTCTAGAAGAAGAAGAAGAAGAAGAAGCGTTACTTGAAAAGGAACCGTCACAAAACCTCAAGAACGAGAGCGTTACTAACGATGGCGCTTGTGAAGATGTTGAAACGGATCTGCAGAGGATGTGCGACGACAACGTTAAACGGAAGAGTGATACTCCAGATTGGGAAACTCTCATCTCCAATTCTTCTGACATGTTGATCTATGGCTCACCTAATGATTCAGAGGCTTTCAGATGCTTCTTGCAGCGATCATCAGACTCCAAAACACGTTTATGCAGCGGCGGTTCAAAGCCTGCATTGGATCCTAGTGTTTCCAAGAGCAATGAACCTGAGTCCTCTGATGCTCTTTCCATATTGCATCGTGGAGTGAGAAGACGCTGTCTAGACTTTGAGATGCCGAGATGTGTAGTGCCTAGCATTGGTCTCCATCTTAACGCCATTGCAATGTCTTGTAAGGACAACAATGTTAGTAAACAACACTCATATACCGGAAACGTTAAAGTCGGGTTGCAAAGTTCCACCACTCCTGCTCTCCCCTCTAATGATATTGTCAGAGAAAGTGAAGCCAGGGAAGCTGTAGAAGAGGCTCCAATGCGCAAGTCTGAACAAGCAGGAGAAGGAGAGTCATCATGTAAACGGTGCAACTGCAAAAAATCAAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGAGTTTATTGCATAGAGCCATGTTCATGTGTTGATTGCTTCAACAAACCTATCCATGAAGACACTGTATTGGCTACTCGCAAACAGATTGAATCCAGAAATCCCCTTGCATTTGCTCCTAAAGTCATCAGAAACTCTGATTCCATCACTGAAGTTGGAGAAGATGCAAGCAAAACTCCGGCCTCAGCGCGACACAAAAGAGGCTGTAACTGCAAGAAATCAAATTGTCTGAAGAAGTATTGTGAATGCTATCAGAGTGGTGTTGGCTGTTCTATAAACTGTAGATGTGAAGGATGTAAAAATGCATTTGGCAGAAAAGATGGGTCTTCATTTGCTGGTATGGATACCGAACAAGATCAAGAAAATGAAACATCTGGCAAAAGTGGAACAGCCATACCACTTCCACCTTCAACACCAATGTCATTAAGACAACCATTGTCTCAACTTCCCAACTCATCAAACAACATGCTGCTTTCTCAACAGTCTCAGCAACATCTTCATGGAGCTTCTGGATCATCCTTGTACAATAATAGCCAATCATCTTTCAGAAAGCAAGATATGAGTTTGTTGTCTCATTCAAGGATTGATACAATTGCAGAGGAAAGAGCAGAGGATATTGAGGATATTGAGAATCTTATTCAGTCTCCAGTTACCAACATCAATGCGGTATCTCCAAACAGCAAAAGGGTTTCTCTGCCACATATGGAGTCAACAGAGACGACTCCTTGGAGAAGAAACGGTGGAAGGAAGCTCTTGCTGTCTTCAATTCCAACTTTTCCTTCACTCACTCCACACCACTGA
Protein Sequence:
- >Rsa1.0_00181.1_g00005.1|Raphanus_sativus|CPP|Rsa1.0_00181.1_g00005.1
MDTPQKTVTQIETPVSKLKVENSPVFNYINSLSPITTVKSTSTAQTFSSLTFTSPPPVFTTPHVVASHKESRFRSHSNSSDPSKVGPEASTLEEEEEEEALLEKEPSQNLKNESVTNDGACEDVETDLQRMCDDNVKRKSDTPDWETLISNSSDMLIYGSPNDSEAFRCFLQRSSDSKTRLCSGGSKPALDPSVSKSNEPESSDALSILHRGVRRRCLDFEMPRCVVPSIGLHLNAIAMSCKDNNVSKQHSYTGNVKVGLQSSTTPALPSNDIVRESEAREAVEEAPMRKSEQAGEGESSCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCVDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRNSDSITEVGEDASKTPASARHKRGCNCKKSNCLKKYCECYQSGVGCSINCRCEGCKNAFGRKDGSSFAGMDTEQDQENETSGKSGTAIPLPPSTPMSLRQPLSQLPNSSNNMLLSQQSQQHLHGASGSSLYNNSQSSFRKQDMSLLSHSRIDTIAEERAEDIEDIENLIQSPVTNINAVSPNSKRVSLPHMESTETTPWRRNGGRKLLLSSIPTFPSLTPHH