Information report for PGSC0003DMP400040093
Gene Details
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Functional Annotation
- Refseq: XP_015159356.1 — PREDICTED: CRC domain-containing protein TSO1-like isoform X2
- TrEMBL: M1C4F7 — M1C4F7_SOLTU; Uncharacterized protein
- STRING: PGSC0003DMT400059571 — (Solanum tuberosum)
Family Introduction
- CPP-like (cystein-rich polycomb-like protein) proteins are members of a small transcription factor family whose typical feature is the existence of one or two similar Cys-rich domains termed the CXC domain. The members of this family are widely present in plants and animals but absent in yeast, and the CXC domains of CPP-like proteins show high conservation across species from amoebae though plants to mammals (Andersen et al. 2007; Riechmann et al. 2000). CPP-like genes play an important role in development of reproductive tissue and control of cell division in plants.
Literature and News
Homologs
- Capsicum annuum: CA08g03370
- Nicotiana benthamiana: Niben101Scf08617g00004.1, Niben101Scf00349g03001.1
- Nicotiana tabacum: XP_016435401.1, XP_016505129.1
- Petunia inflata: Peinf101Scf02635g02018.1
- Prunus mume: XP_008229954.1
- Prunus persica: Prupe.1G473800.3.p, Prupe.1G473800.1.p, Prupe.1G473800.2.p
- Sesamum indicum: XP_011081944.1
- Solanum lycopersicum: Solyc08g067150.2.1
- Solanum melongena: Sme2.5_05423.1_g00003.1
- Vitis vinifera: GSVIVT01035818001
Sequences
CDS Sequence:
- >PGSC0003DMP400040093|Solanum_tuberosum|CPP|PGSC0003DMP400040093
ATGGATTCCCCTGAACCTTCATCAAAAATCACCGCTACCATCAATAATACTTTGTCTTCAGACCCTGTACCTGCCCAAGATTCACCTGTCTTCAATTATATTAGCAACCTCTCTCCCATACAGCCTGTCAAGGGCGCTCCAATTGTGCAAGATTTCTCAGGGCTGAATTCTCCTCCTCTTCTGCTTACCTCACCCCGAATTAATACACACAGTCGATCGAGCCTTTTGAAAAGGAGCCAGTTTCCTAAATTATCCACTGAAGTGTTTTCTGGGAAGAATGAGGATTATAACAATGCTATCACAGATTCAGATGGCACTGGAGTAGTTTTTTCTCCATTGAGAAGTGGACTAAGCCCTTTTGTTCAGAAAGTATCTGATAATAACATATCTGTACATGAGCAAAGTGGGACTCCCATAAGATGTGTGGAATTCTTAGTTGATGTTTCAAACTCAGAGTCTGGCAATCCTTCAAATTCAAATAATACGAGCCCAGAAGTAGCTGATAGTATTCCTCAATCTCCTAATAGTGCAGAAGATTCAAAGGTATCTGTCGTTAACATTGCAAGTAAAGATGAAAGAAAAGACGAGATTCCAGAAGATGCAGCCCGTGTTGTTGTAGAGCAAGCTGAAGAGGACAATAAGGGAAAGTTTCCATCCAATCAGAAATATACTGGGGTTTACAGTACCTCCGATCCTGATCTGCCATCTCATGGTTTCTGCACAAAGATTGTTCCCAGCTTGGCTGCTCATAGTTCGTTGCATTATCATTATGGTGACCAACAAATGGCTCAGCTTTCAACAGCTGGCCACACTATGTTGGACGAGGCTTCTAATATACCGATCAAATCTCTGGAGACTGCACATGATTGCAGAGATGATAGTGATAAGATTAGAATGTCAATTGCACCAGATGAAGGCATTGCGCTGCATGATTCTCAAACCAAGGCTGGTCAACATCAAAGTGGAATAAGTAGGCGCTGTCTCCAATTTGAAGATGCTCAACAGAAGATGGCACCAGCTAGCTCAAGTTCACAGAATGCTTCAGGTATTGTGAGCTGTTCAATACAACCAGTCAGTCCTGCTGTCATAGAGGTTGTAGAGCCAGTTTCATCAAATAGATCATCAAAATTGACCCAACTGGTATCTTCCTCTGTTAATTCTGAAAGCCTAAATGTGAAAGTCTCCAAACCATCTGGTATTGGCTTGCACTTAAATAGTATAGTTAATGGTATGGAAGCTGGTTCTGGTGTAACTGTAAGTGTGAAATCAATTCAGAGGGGAAACTTGAGCATTCGGGGGAAGAAGTTGACGTCCATGATGAGCTGTCACCCTTCTAAGAACTTGAAGAATTGCTTGATATCTTCGAATGTGGTTGGGAGCAACTTGACAATTGGTGACAATGACGGTAAACATGAAAGTTATGGGTCAGATGCAGAAATTGTTGCAGCATCTTTGTCTCTTAATAATGCCAAACCTTTAAATGACACTGTGCTCTTGAAGCCAACAGAGCATACTCCAAGTAACAAAAGGAAGAAGAAAACCTTAGATGGAAATGATGGTGATGGGTGCAAACGCTGCAATTGTAAGAAGACTAAGTGCTTGAAACTTTATTGTGATTGCTTTGCTGCTGGAGTATATTGTGTGGACTCTTGCACTTGCCAAGGCTGCTTCAACAGACCAGAATATGAAGACACTGTTCTTGATGTGCGGCAGCAAATCCAGTCTCGGAATCCCCTGGCATTTGCTCCAAAAATTGTGCAGCATTCCACTAGTTCCCCTGCAAATATTCTTGGGGAGGGTGGAGCAAGTTTTACGCCTTCCTCTGCAAGGCACAAAAGAGGGTGCAACTGCAAGAAGTCAATGTGTTTGAAAAAGTACTGTGAGTGCTATCAGGCTAATGTTGGATGTTCCAGCGGATGCCGCTGCGAAGGATGTAAAAATGTCTTTGGTCCGAAGGAAGAATGTGGTATAGATTTGGTGAATAAACACTGCATCACTGAAAGATTGGAGAGGTCAGTTGAGGAAGAGGTAGAGATGGTGACAGCTACAACAGCATATGGACTCTCCCCAGGATCTCCTAGAAGTTCTAATAACCATGACATACATCAGGAAACTACTGGTGATATGCTGGATCTTGTTACCTTCGATCATGAGTTAAATTATGGCAATGCAAAGTTAGCAAATGAAATTTCACCAGGGTTTCATGTGACTGGCAACATGGATGACATTTTGGCGCTGCCAAAGTCACAGGATTGGGCAAGTAATTCAGGTGGTCAACTGATTCCTCAAACTGTCCATTTCCAGTCCACGGATCCACTAAGCTGGCATAACTCACCGATGACCCAGTTTGACAGGAGTGGAATGAACACTCTGGAATTACTAGACTCTGATAAGAAGCCATATGTGATGGAAGATGACACACCTGAAATACTAAAGGCCTCTTCTATACTACAAATTGGTGTTAAAGTAAACTCCCCGAATAAGAAGCGTGTTTCTCCACCTTATCGTCATTTGAATGAGATTGGTTCTAGTTCATCTGGAGGAGGCTTAAAAACCGGCCGGAAATTCATATTGCGAGCTGTTCCTTCTTTCCCACCACTTTCCCCATGTATTCAATCCAAAGATGTTGCTGTTCATAGTACCAATAATTCTGAAAAGGATAGCAGCAGCAAATAA
Protein Sequence:
- >PGSC0003DMP400040093|Solanum_tuberosum|CPP|PGSC0003DMP400040093
MDSPEPSSKITATINNTLSSDPVPAQDSPVFNYISNLSPIQPVKGAPIVQDFSGLNSPPLLLTSPRINTHSRSSLLKRSQFPKLSTEVFSGKNEDYNNAITDSDGTGVVFSPLRSGLSPFVQKVSDNNISVHEQSGTPIRCVEFLVDVSNSESGNPSNSNNTSPEVADSIPQSPNSAEDSKVSVVNIASKDERKDEIPEDAARVVVEQAEEDNKGKFPSNQKYTGVYSTSDPDLPSHGFCTKIVPSLAAHSSLHYHYGDQQMAQLSTAGHTMLDEASNIPIKSLETAHDCRDDSDKIRMSIAPDEGIALHDSQTKAGQHQSGISRRCLQFEDAQQKMAPASSSSQNASGIVSCSIQPVSPAVIEVVEPVSSNRSSKLTQLVSSSVNSESLNVKVSKPSGIGLHLNSIVNGMEAGSGVTVSVKSIQRGNLSIRGKKLTSMMSCHPSKNLKNCLISSNVVGSNLTIGDNDGKHESYGSDAEIVAASLSLNNAKPLNDTVLLKPTEHTPSNKRKKKTLDGNDGDGCKRCNCKKTKCLKLYCDCFAAGVYCVDSCTCQGCFNRPEYEDTVLDVRQQIQSRNPLAFAPKIVQHSTSSPANILGEGGASFTPSSARHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNVFGPKEECGIDLVNKHCITERLERSVEEEVEMVTATTAYGLSPGSPRSSNNHDIHQETTGDMLDLVTFDHELNYGNAKLANEISPGFHVTGNMDDILALPKSQDWASNSGGQLIPQTVHFQSTDPLSWHNSPMTQFDRSGMNTLELLDSDKKPYVMEDDTPEILKASSILQIGVKVNSPNKKRVSPPYRHLNEIGSSSSGGGLKTGRKFILRAVPSFPPLSPCIQSKDVAVHSTNNSEKDSSSK*