Gene Details:

  • Gene ID: Pavir.2NG054200.1.p
  • Gene Family: CPP Family
  • Description: CPP Family protein
  • Species: Panicum virgatum
  • Source: CPP family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_025799594.1  — protein tesmin/TSO1-like CXC 2
  • TrEMBL:  A0A2S3GWC5  — A0A2S3GWC5_9POAL; Uncharacterized protein
  • TrEMBL:  A0A2T7EL85  — A0A2T7EL85_9POAL; Uncharacterized protein
  • STRING:  Pavir.Bb00411.1.p  — (Panicum virgatum)

Gene Ontology:

  • GO:0009934  — Biological Process — regulation of meristem structural organization
  • GO:0048444  — Biological Process — floral organ morphogenesis
  • GO:0051302  — Biological Process — regulation of cell division
  • GO:0005634  — Cellular Component — nucleus

Family Introduction:

  • CPP-like (cystein-rich polycomb-like protein) proteins are members of a small transcription factor family whose typical feature is the existence of one or two similar Cys-rich domains termed the CXC domain. The members of this family are widely present in plants and animals but absent in yeast, and the CXC domains of CPP-like proteins show high conservation across species from amoebae though plants to mammals (Andersen et al. 2007; Riechmann et al. 2000). CPP-like genes play an important role in development of reproductive tissue and control of cell division in plants.

Literature:

Sequences:

CDS Sequence:
  • >Pavir.2NG054200.1.p|Panicum_virgatum|CPP|Pavir.2NG054200.1.p
    ATGGACACGCCCGACCGCGCCGCCGCGCAGCCGCCGCCGGCCTCGCGCGCCGAGGACTCGCCGGTTTTCAGCTTCATCAACAATCTGTCTCCCATCGAGCCTCTCAAGTCGGCTTACAACGCGAGCAGCATCCAGGGATACCAGTCCATCAACATAACCTCCGTTTCCTCCATCTTCACTTCCCCGCACGACAATGCGCACAAGGAAACAAGGCTCGCAAAGAGCTCTCTCGGTGAAATTTCTGAAAGTGAGGTCTGTGCTGGTGGCAGCAAAACAAACAAGCCGGCTAAGTCTTCAAATGCTGTCAGGTTGTTTGCCCGTGCTAGCACTGTCACTCGGGAAACCCACACAGTTACATGCTCAGATGTGGCTGATCCTCCAACTGAGCCATGCGATTTGGCTCAGCCTGCTCAATTCGATAATGGCAGTCCAGACCATAACACCACTCCTTGCCATGGTGTCAGATCAGACCTTAAGCAGGAAAAGTGTCGGAAATTGGATGTTGTCCAGACCGTTAAAAATACAGTGGAGAAAAGGAAATGCTTGTTTTCCACTGAAATCCAGCTCCTGGATGGTGGCCAGCCTGTGAATGACAGTGATGATGTCTTGGGATGTGAATGGTCGGACTTAATCTCCACAACCTCGGGTGAGCTTTTGGCCTTTGACTCCACGATGGATGACCATCACAGAGGAATGCATCTGGCAGCTAAAAATGCAGAATCTTGTGGATACTTGCTGTCGAAACTTACAGGAGGTGGTGAAATCTCGGACAGAGCACATCCTAGTGCATCTGGTCAAGTATACTATCAAGAAATCGTGATGGGAGAAGATCAGGCAGAAAATCCTCAAATATTTCAGGATGGTCAACAAACCATCTCAACAGAAGAAATTCAGGATAACATTTATGAAGCGAATGGATGTATTCCATTAGACTACAAGGTGGAGAGCCAACAACGTGGGATACGAAGACGTTGCTTGGTATTTGAGGCAGCTGGGTTCTCAAATACTGTTGTGCAGAAAGAGACTGTTGAGAGTCTCTCTGTCTCAACATGTAAAGGCAAGAGCCATGTACAAACCCAGCCACGTGGGTTGCGTGGTATAGGTCTACATTTAAATGCCCTTGCATTAACACCAAAAGGAAAAATGGCCAGTCAGGATCCTATGGCTTCTGGTTTGCATCCATCATCGGGATCTGAAAAGGATGTGCATGGCAAGTTTCTCTCGGCAGGAGAGAAATTTCCAGACTCTGGTGGTGAGCTTTTAGAATTTCCCATGGATGATTGTTCAGCTGGAGGTTTTCCTGTAAATGATCATGTTTCAAGTCAAAGTGTCAGTCCTCAAAAGAAGAGGCGTAAAACAGATAATAATGGTGATGATGGTGAGGCATGCAAGCGGTGCAGCTGTAAGAAATCAAAGTGCCTGAAACTGTATTGTGAGTGCTTTGCTGCTGGTGTTTACTGCTCTGAACCTTGTTCGTGTCAAGGATGTTTGAACAAACCCATACATGAGGAAATTGTCCTTTCCACTCGGAAGCAGATAGAGTTTCGTAATCCCCTAGCATTTGCCCCAAAAGTGATCCGTATGTCTGACGCTGGTCCGGAAACTGGGGAAGATCCTAACAGCACTCCAGCCTCAGCTCGTCACAAGAGAGGATGCAATTGCAAGAAATCAAGCTGTCTCAAGAAATACTGTGAATGCTACCAGGGAGGTGTTGGATGCTCTAGCAACTGCAGATGTGAGAGTTGCAAAAACACTTTCGGCAGAAGAGATGCTGACACTGAACTCACTGAAGAAATGAAACAAGAAGGTGAACAAGCAGAAAATTGTGGAAAAGAGAAGGAGAATGATCAGCAAAAGGCAAATCTACAGAACGAAGATCATCCCCTCCTTGAGCTTGTTCCAATAACACCTCCTTTTGATCTTTCCAGTTCTCTGCTTAAACTGCCAAATTTCTCAAGTGCAAAACCACCAAGACCTTCCAAAGCTCGCAGTGGGAACTCCCGTTCGTCTGCTTCAAAAGTTACTGCAACATTGCAGTCTTGTAAATCATCCAAGGTTGCTGGTAGTGCTATAGATGAGGAGATGCCAGATATTCTAAAAGAAGCTGATTCTCCTAACAACTGTGTCAAGACTACTTCACCCAACGGAAAACGAGTCTCACCACCACATAATGCGCTCAGTATTTCCCCGAACCGGAAAGGTGGTAGGAAATTAATATTGAAGTCAATTCCCTCATTTCCATCACTTATGGGAGAGTCAAACAGTGGTTCTACAATGAATGATACCGAAAACGCATTCAGCACATCGCCTCTCGTTTTAGGACCATCTTAA
Protein Sequence:
  • >Pavir.2NG054200.1.p|Panicum_virgatum|CPP|Pavir.2NG054200.1.p
    MDTPDRAAAQPPPASRAEDSPVFSFINNLSPIEPLKSAYNASSIQGYQSINITSVSSIFTSPHDNAHKETRLAKSSLGEISESEVCAGGSKTNKPAKSSNAVRLFARASTVTRETHTVTCSDVADPPTEPCDLAQPAQFDNGSPDHNTTPCHGVRSDLKQEKCRKLDVVQTVKNTVEKRKCLFSTEIQLLDGGQPVNDSDDVLGCEWSDLISTTSGELLAFDSTMDDHHRGMHLAAKNAESCGYLLSKLTGGGEISDRAHPSASGQVYYQEIVMGEDQAENPQIFQDGQQTISTEEIQDNIYEANGCIPLDYKVESQQRGIRRRCLVFEAAGFSNTVVQKETVESLSVSTCKGKSHVQTQPRGLRGIGLHLNALALTPKGKMASQDPMASGLHPSSGSEKDVHGKFLSAGEKFPDSGGELLEFPMDDCSAGGFPVNDHVSSQSVSPQKKRRKTDNNGDDGEACKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKPIHEEIVLSTRKQIEFRNPLAFAPKVIRMSDAGPETGEDPNSTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSSNCRCESCKNTFGRRDADTELTEEMKQEGEQAENCGKEKENDQQKANLQNEDHPLLELVPITPPFDLSSSLLKLPNFSSAKPPRPSKARSGNSRSSASKVTATLQSCKSSKVAGSAIDEEMPDILKEADSPNNCVKTTSPNGKRVSPPHNALSISPNRKGGRKLILKSIPSFPSLMGESNSGSTMNDTENAFSTSPLVLGPS*