Information report for Oropetium_20150105_18202A
Gene Details
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Functional Annotation
- Refseq: XP_004963116.1 — protein tesmin/TSO1-like CXC 2
- TrEMBL: A0A368QN90 — A0A368QN90_SETIT; Uncharacterized protein
- STRING: Si021159m — (Setaria italica)
- GO:0009934 — Biological Process — regulation of meristem structural organization
- GO:0048444 — Biological Process — floral organ morphogenesis
- GO:0051302 — Biological Process — regulation of cell division
- GO:0005634 — Cellular Component — nucleus
Family Introduction
- CPP-like (cystein-rich polycomb-like protein) proteins are members of a small transcription factor family whose typical feature is the existence of one or two similar Cys-rich domains termed the CXC domain. The members of this family are widely present in plants and animals but absent in yeast, and the CXC domains of CPP-like proteins show high conservation across species from amoebae though plants to mammals (Andersen et al. 2007; Riechmann et al. 2000). CPP-like genes play an important role in development of reproductive tissue and control of cell division in plants.
Literature and News
Homologs
- Brachypodium distachyon: Bradi4g02390.1.p, Bradi4g02390.5.p, Bradi4g02390.4.p, Bradi4g02390.6.p
- Panicum virgatum: Pavir.3KG537400.2.p, Pavir.3KG537400.1.p, Pavir.3NG326200.1.p
- Setaria italica: Seita.3G382000.1.p
- Setaria viridis: Sevir.3G398600.1.p
- Triticum aestivum: Traes_5AS_282747CEF.2, Traes_5BS_FED4AE2C5.2
- Zea mays: GRMZM2G701689_P01
Sequences
CDS Sequence:
- >Oropetium_20150105_18202A|Oropetium_thomaeum|CPP|Oropetium_20150105_18202A
ATGGACACGCCGGATAGGCCCCGCGCCGGCGCCGCCGCCGGGTTCGAGGATTCTCCTGTCTTCAATTTCATCAACAATCTATCACCTATACCGCCACCTAAACCTTCAGCCCCAACACAGTGTGTGCAGCTTTTTAAGTCATCAGACTTGGCACCAGTTTCTCATATCTTTACCTCACCACATGTCAACCCAACAAAGGAACCTAAACTTCTGATAAGGGATGATTCGGTTCAACTAGCTCAAGAATCACACTCGCCTAACAGTGTTAGAACTCGGACAGGAACTTCAAGCTCTTTTAGATTGATCAGATGCACAGACATTGTTTCAGAGAATCAGAATATCACTTGTAACCTGAACGATGTTTGTGTTGATTCATCAGAGAACACATCAAACTTACAAAGTGAGTTGCCTCAGTCCATCCAGACTGGCAATCCTAGTGTGGAAACTGACAAGAATCAATGCGCTGATGATAGAACAGACCTTAAAATATCCCAGGAGTGTCAAGGCCTAGTAGAGTCTTTTATTCTTGATCGCAATGGTCCAAACAAAATGGATTCCTCACATTCGGGAGAAAATGTTCATGAAAAGAAGCAATCTGAACAAAATGATGATGCACTCGCAACATATGATGCTGATTACATGACTACACATGAACCAAATGGTGATATGCTGACATTAGCTATGCCAATTGTGGCCGAAACAGAGGCAACAAATGAAGCTCAAAAAACTGGTAATGCCTACTCCTTGCCAAATGACAACTCTGGTGGCTATTACATCCAAGATTCAGCACATGCGCCTCGTCATTACTGGACTGGGCCAGTAGACAGAGTAGCCGTAGATAATTCTACTCCACAAATGCTCCCTGATTCTTTGCAAGACCAGTTGATTCTAAATGATCAAGTCGGGGACAAGCTCCATCAGCCCAGCGATTACATGCCAACAGAGAAAAATGCCTTGCCACAGCATTTACGTGGAATGCGTAGGCGCAGCCTTTTCAATGAAAAGGCAGGGGCTACCAATAAAGGTGCAAATAAAGCTTCAGATCGCCATCTTGCAAATTTAACCACACCCAAATGCAAACTTAAATCTAATGACAACTCAAAGCTGAGAACCCCACCATGTGCACTGCCTGGTATTGGATTGCATCTGAATGCCCTCGCTGCTATACCCAAAGAAAAAATGGCCCTTCAAGACACTCAGCTTACTATAACTCGATGCAGCAACTTACCCTACCATGCTGGATTTTCTCCACCACCATATGAACAAAATATTATGAGTCATGATTTTGCTCAAACAACTGATGTTGTAACTGCCGAAGATCCTACTGGTAGTCCAAAGAAGAAAAGGCACAAGTCTGATAATGGTGATGGTGATGGCACTTCCTGCAAGCGATGTAGCTGTAAGAAATCAAAGTGCTTGAAACTCTACTGTGAGTGTTTTGCTGCTGGAGTGTACTGTTCAGAGCCTTGTTCATGTCAAGGCTGTCTGAATAACGAAATTAATATGACAACAGTTCTATCTACTCGACAGCAGATTGAATCTCGCAATCCATTAGCGTTTGCTCCTAAAGTAATTCGCACATCCGAGCCTGATCAGGAATTAGGGGACTTTTCTAACAAAACTCCTGCTTCAGCTCGTCATAAAAGAGGCTGTAATTGCAAGAAGTCATCTTGCACAAAGAAATACTGTGAATGTTTTCAGGGTGGTGTGGGATGCTCAGTGAGTTGCAGATGTGAGAATTGTAAGAATACTTTTGGACAGAGGGAGGGAGTCACTGTTTCAAACGTAGGGGAATCAAAGCTAGCACTTGAAGAAAACAATCCTTGTGTGAAAGAAGAAAAATGTGAAAACGATACACAGCTTGTTATGTACCAAGCTGTGGACTCTGATCCTGCTAAGAACGTTCTGTCAGCACCTATGATTGTGGACTGCAGGCCCTTGGCTACTTTTCCACCCTCAACCTCAAAGAAGCCACGATCTTCGACAAAACTCTCTGTACATTCTTCTCGTGCGTGCAACACGCAAGCTCCTTTGAAGCCTGACATTGTTCAGTCTCCTTTCAAAAACTATGCAGAAATGATTTTTAGCGACAGCACTTCAGATACCCTGAAAGGAAGTTCATCATCTCCTCAAACCTCTGTGAAGGTTGTGTCACCTAATAAGAAACGGATATCTCCCCCTCGTATCGGTACTGGATTGTCTCCGATCTGTAAGAGTGGCAGGAAGCTGATTCTCAAGTCTATCCCTTCTTTCCCTTCACTTGGCGGTGATATAAACAATGAGGATCAAAAGAACAAGTCAGCAGCACCTTGA
Protein Sequence:
- >Oropetium_20150105_18202A|Oropetium_thomaeum|CPP|Oropetium_20150105_18202A
MDTPDRPRAGAAAGFEDSPVFNFINNLSPIPPPKPSAPTQCVQLFKSSDLAPVSHIFTSPHVNPTKEPKLLIRDDSVQLAQESHSPNSVRTRTGTSSSFRLIRCTDIVSENQNITCNLNDVCVDSSENTSNLQSELPQSIQTGNPSVETDKNQCADDRTDLKISQECQGLVESFILDRNGPNKMDSSHSGENVHEKKQSEQNDDALATYDADYMTTHEPNGDMLTLAMPIVAETEATNEAQKTGNAYSLPNDNSGGYYIQDSAHAPRHYWTGPVDRVAVDNSTPQMLPDSLQDQLILNDQVGDKLHQPSDYMPTEKNALPQHLRGMRRRSLFNEKAGATNKGANKASDRHLANLTTPKCKLKSNDNSKLRTPPCALPGIGLHLNALAAIPKEKMALQDTQLTITRCSNLPYHAGFSPPPYEQNIMSHDFAQTTDVVTAEDPTGSPKKKRHKSDNGDGDGTSCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNNEINMTTVLSTRQQIESRNPLAFAPKVIRTSEPDQELGDFSNKTPASARHKRGCNCKKSSCTKKYCECFQGGVGCSVSCRCENCKNTFGQREGVTVSNVGESKLALEENNPCVKEEKCENDTQLVMYQAVDSDPAKNVLSAPMIVDCRPLATFPPSTSKKPRSSTKLSVHSSRACNTQAPLKPDIVQSPFKNYAEMIFSDSTSDTLKGSSSSPQTSVKVVSPNKKRISPPRIGTGLSPICKSGRKLILKSIPSFPSLGGDINNEDQKNKSAAP*