Information report for mrna05847.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_011466742.1 — PREDICTED: protein tesmin/TSO1-like CXC 2
- TrEMBL: A0A2P6RWF0 — A0A2P6RWF0_ROSCH; Putative transcription factor Tesmin family
- STRING: XP_004305318.1 — (Fragaria vesca)
Family Introduction
- CPP-like (cystein-rich polycomb-like protein) proteins are members of a small transcription factor family whose typical feature is the existence of one or two similar Cys-rich domains termed the CXC domain. The members of this family are widely present in plants and animals but absent in yeast, and the CXC domains of CPP-like proteins show high conservation across species from amoebae though plants to mammals (Andersen et al. 2007; Riechmann et al. 2000). CPP-like genes play an important role in development of reproductive tissue and control of cell division in plants.
Literature and News
Homologs
- Citrus sinensis: orange1.1g014239m
- Juglans regia: WALNUT_00000297-RA
- Manihot esculenta: Manes.04G117200.1.p, Manes.04G117200.2.p
- Populus trichocarpa: Potri.001G173600.1
- Prunus mume: XP_016649207.1
- Prunus persica: Prupe.3G078800.12.p, Prupe.3G078800.14.p, Prupe.3G078800.1.p, Prupe.3G078800.13.p, Prupe.3G078800.8.p, Prupe.3G078800.10.p, Prupe.3G078800.3.p, Prupe.3G078800.6.p, Prupe.3G078800.9.p, Prupe.3G078800.11.p, Prupe.3G078800.7.p, Prupe.3G078800.5.p, Prupe.3G078800.2.p, Prupe.3G078800.4.p
- Ricinus communis: 29841.m002799
- Ziziphus jujuba: XP_015868332.1, XP_015872098.1
Sequences
CDS Sequence:
- >mrna05847.1-v1.0-hybrid|Fragaria_vesca|CPP|mrna05847.1-v1.0-hybrid
ATGATCGACGGCGACGACAACGTCAGAATCGGAATCGAAATCGAAGGTCGAAGAGTTGAGAGACAGAGAGAGAGAGACGTTCCAAATGTCGTTTCGGTGGGGTTCACCACTATTCCTCGACTCTCAGTCTTTTATAGAGCTCTCACTCTCCCACCTGTATCCCGTAAAGTTTTCTCTGACTTCGCTGCTTGGAAAATGGACGGGTCTCCGGAAACGAATCGGGTCGCCGCGGTCGCCAACTCATCGCCGCCGCAATCATCGTCTCCGGCTGTGCAAGAGTCGCCTTTCTCCAATTTCCTTAGCAATCTCACTCCTATCAATACGGTTAAGAGTGACAGTTATTCGCAAAGATTAGTAGGAGCCTTCTTGCCGACGCCACCAGTTGTGTTTACATCTCCTCGTATTGATTTGGAGCGAGAAACCGGTTACTTGGAAATGAATGATATAGTTGAAGCAGGTTCAAATGTTGATGTTTATAAAGAATGCAATACAACGATAGTCCAGAGTGCTAGTTTTAAGAAGGAGGTCCAGTTGTGCGGTTCATCAGGCTGTATTGATGAATATATGGCTGACCCTGCAAAGGTAGACTGTACACATTCTGCTGATATACAGAGTGGTATCACTGCCAGCAAAGAATCCAATACAGAAGTTCATGAGGATATTGATGGTAGTACAAAGAGTGAGGCCCTTACAACATCGAATCAAGCTGAAGAGGATCTCCATTTACCTTCACTGAAACAGATTGAAGCCACAGTCATTGAGAGGACTGATAAAAATAGCGTAGCTCTTGTCACCCGAGCACAAAGCCGTGGACAGAATACAGCTAAGGAGGTTAGTCAACACCACCGTGGTATACGCAGGCATCTCCAATTTGAGACTGCAGTAGCCCACAAGAATTCTAGCTTTGATAGCCATAAAAGTCTTTGCAGTCTGAGACATGATACTGCCAATTTAAGGTCAGCTTCTAAACGAATAAACTTGAAGACTCTTGCTTCTCAAATAAATAACAAAGCCTTCAACAGTCCGCAGGGTGTTAGCTGTGACACTTCACAGTTGTCTTGCCTGTATGAGTCAGTTAGATCCGGCCAAATTTGTTCTGGTATCGGTTTACATCTGAATAGCATTACTCAGTCTACATCCATGAGCTCAGATGTATTTTCAAGCAGGAAATCAACTGGTTGTCTGAGCACGCCTGACCAGATGTTGGAGCATGACAACTTGGAACACGAATCAAGTAGTAGCTTTATTTCAGCTATACCTCAGCAAAATTATTCTTGTATGGGCGATGATCAGCAAGGAAGTCAAACGGCTGTGCACACTACGTTCAGTTTTTATTCTACTAATGGTTTACCATACCTACCATGTGATTCTACGGATCAGATGCTGGTTGACCAGGACTCGGTTCCTTTTGAGGAGCTGAATGCGTCAGAGGGTGCTAATAAGATTGAGGAATCAAACCAACTGAGCGAGAAAAGGAAAAGGCAAGAGAAGAGGTGCAGAGATAATTATTGCGAGTGCTTTGCAGCTGGAGTATTTTGTTTGGATTCATGTTCATGTGAAAACTGCTACAACAAGCCTGAGTTTGAGGACACTGTTTTTGATGCTCGTCAGCAAATTGAATCCCGTAATCCGCTTGCATTTGCTCCCAGAGTTGTTAAGCATGATTTCAACTCTTCACCTAAGATTATGGAAGAAGCTGACTGGACGACCCCATCATCAGCCAGGCACAAGAGAGGTTGCAACTGCAAGAAGTCGAAGTGCCTGAAAAAATACTGTGAATGCTACCAGTTGGTTATTGTTGTGCTCTTGACTTATTCTGATGTCATCCCTCTTTCTTCCCCTTCGTATTTTCTCCAGGCTAATGTTGGATGTTCTGCTGCATGTAGATGTGATGGTTGCCAAAATCCATGTGGCACTACGGCAGACCAAGAATACAACCGAGCTGAAAAATGGGAAACCCACATTGCTGACAAGCTGGATACTATTAAGTGTGGGAATGATTGCATCAAGGCCACAAGTATGGATACGTACTCTCCTTCATGGGAAGGACTTTCGGTTATAAGCAATTTCACCCCATTGTCAAATCCTTGCTCAAGTACCATGGTTTCTTCAGCTTCATCGATTATGAGAAACTGCACAAAAAATTCACAAGCCCGACTGCAATCAAGCAGGCTTCAGCCATCAGGTACTGGTCAGTTAAAAAGGGGACGGTCGCCTGTCATTTTTACCCCACAAGAATTTGAAAGCAAGGGACCCTATCAGCTCAGTTCTGATGGTGCCAGTTATGAAAGAACGGATGATGATATACCTGAGTTACTGAAGGAACCTTCTATTCCCCCCAAGGTAGTCAAAGGTTCACCAAACCAGAAACGTGTGTCACCTCCACAATCCCGAGCTGAGAAGTTGCGGTCAAGGTCTCCTAAAGGCTTGAGAAGTGGCCGCAAATTCATTTTGCAGGCCATGCCTTCTTTCCCTCCTCTGTCCCCTTACAGTGATTCTAAAGCTGTCAATGATACTATGAATGACCATGAAGGTACCCACAACAATTAG
Protein Sequence:
- >mrna05847.1-v1.0-hybrid|Fragaria_vesca|CPP|mrna05847.1-v1.0-hybrid
MIDGDDNVRIGIEIEGRRVERQRERDVPNVVSVGFTTIPRLSVFYRALTLPPVSRKVFSDFAAWKMDGSPETNRVAAVANSSPPQSSSPAVQESPFSNFLSNLTPINTVKSDSYSQRLVGAFLPTPPVVFTSPRIDLERETGYLEMNDIVEAGSNVDVYKECNTTIVQSASFKKEVQLCGSSGCIDEYMADPAKVDCTHSADIQSGITASKESNTEVHEDIDGSTKSEALTTSNQAEEDLHLPSLKQIEATVIERTDKNSVALVTRAQSRGQNTAKEVSQHHRGIRRHLQFETAVAHKNSSFDSHKSLCSLRHDTANLRSASKRINLKTLASQINNKAFNSPQGVSCDTSQLSCLYESVRSGQICSGIGLHLNSITQSTSMSSDVFSSRKSTGCLSTPDQMLEHDNLEHESSSSFISAIPQQNYSCMGDDQQGSQTAVHTTFSFYSTNGLPYLPCDSTDQMLVDQDSVPFEELNASEGANKIEESNQLSEKRKRQEKRCRDNYCECFAAGVFCLDSCSCENCYNKPEFEDTVFDARQQIESRNPLAFAPRVVKHDFNSSPKIMEEADWTTPSSARHKRGCNCKKSKCLKKYCECYQLVIVVLLTYSDVIPLSSPSYFLQANVGCSAACRCDGCQNPCGTTADQEYNRAEKWETHIADKLDTIKCGNDCIKATSMDTYSPSWEGLSVISNFTPLSNPCSSTMVSSASSIMRNCTKNSQARLQSSRLQPSGTGQLKRGRSPVIFTPQEFESKGPYQLSSDGASYERTDDDIPELLKEPSIPPKVVKGSPNQKRVSPPQSRAEKLRSRSPKGLRSGRKFILQAMPSFPPLSPYSDSKAVNDTMNDHEGTHNN*