Gene Details:
- Gene ID: GSBRNA2T00142012001
- Gene Name: GSBRNA2T00142012001
- Gene Family: CPP Family
- Description: CPP Family protein
- Species: Brassica napus
- Source: CPP family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: XP_013734179.1 — transcriptional corepressor LEUNIG_HOMOLOG isoform X1
- Refseq: XP_013734180.1 — transcriptional corepressor LEUNIG_HOMOLOG isoform X1
- Refseq: XP_022571644.1 — transcriptional corepressor LEUNIG_HOMOLOG isoform X1
- Swissprot: O48847 — LUH_ARATH; Transcriptional corepressor LEUNIG_HOMOLOG
- TrEMBL: A0A3P6AXK5 — A0A3P6AXK5_BRAOL; Uncharacterized protein
- STRING: Bo3g026760.1 — (Brassica oleracea)
Gene Ontology:
- GO:0001666 — Biological Process — response to hypoxia
- GO:0006974 — Biological Process — cellular response to DNA damage stimulus
- GO:0006979 — Biological Process — response to oxidative stress
- GO:0009414 — Biological Process — response to water deprivation
- GO:0009611 — Biological Process — response to wounding
- GO:0009617 — Biological Process — response to bacterium
- GO:0009620 — Biological Process — response to fungus
- GO:0009624 — Biological Process — response to nematode
- GO:0009733 — Biological Process — response to auxin
- GO:0009793 — Biological Process — embryo development ending in seed dormancy
- GO:0009827 — Biological Process — plant-type cell wall modification
- GO:0009909 — Biological Process — regulation of flower development
- GO:0009944 — Biological Process — polarity specification of adaxial/abaxial axis
- GO:0010073 — Biological Process — meristem maintenance
- GO:0010272 — Biological Process — response to silver ion
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0045995 — Biological Process — regulation of embryonic development
- GO:0046898 — Biological Process — response to cycloheximide
- GO:0048358 — Biological Process — mucilage pectin biosynthetic process
- GO:0048359 — Biological Process — mucilage metabolic process involved in seed coat development
- GO:0071217 — Biological Process — cellular response to external biotic stimulus
- GO:0080001 — Biological Process — mucilage extrusion from seed coat
- GO:1901001 — Biological Process — negative regulation of response to salt stress
- GO:1902074 — Biological Process — response to salt
- GO:1902183 — Biological Process — regulation of shoot apical meristem development
- GO:2000024 — Biological Process — regulation of leaf development
- GO:0005634 — Cellular Component — nucleus
- GO:0003713 — Molecular Function — transcription coactivator activity
- GO:0005515 — Molecular Function — protein binding
Family Introduction:
- CPP-like (cystein-rich polycomb-like protein) proteins are members of a small transcription factor family whose typical feature is the existence of one or two similar Cys-rich domains termed the CXC domain. The members of this family are widely present in plants and animals but absent in yeast, and the CXC domains of CPP-like proteins show high conservation across species from amoebae though plants to mammals (Andersen et al. 2007; Riechmann et al. 2000). CPP-like genes play an important role in development of reproductive tissue and control of cell division in plants.
Literature:
- Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice. DOI: 10.1007/s00239-008-9143-z ; PMID: 18696028
Sequences:
CDS Sequence:
- >GSBRNA2T00142012001|Brassica_napus|CPP|GSBRNA2T00142012001
ATGGCGCAGAGTAATTGGGAATCTGATAAGATGCTTGACGCTTACATATATGATCATCTGGTGAAGAAGAAACTGCATAACATTGCTAAGTCTTTTGTGACTGAAGGCAAAGTCTCTCCTGATCCTGTTGCAATTGATGCTCCTGGTGGGTTTCTGTTTGAGTGGTGGTTTGTGTTCTGGGAGATGTTCTATGCTAGGACGAAGGAGAAGCATGATGAGTCTGTTGTTGAGTATGGGCTTAACGTTTACATCTTTGATTATCTGGTGAAGAAGAAACTGCATTACACTGCTAAGTTGTTCATGACTGAAGTGAAAGTCTCTCCGGATAATGTTGCAATTGATGATCCTCGTGGGTTTCTTTCTGAGTGGTGGTCTTTGTTCTGGGACGTCTACATTGCTAAAACGAATGAGAAGCATTCTGAGTCTACTGCAGAGGCGCAACAAGGTAAAGCGAAGGAGCAGATGAAGCAACCCAATCCAATTAACACTGAGACATCCCAAACCCATATGGATGCAGGGACAATCCATCATGGTCAGATGGTCCAAGGGAATAATCAAGGAGGTGTTTCGGCAGCACTTCAGTCACGCACTCAGCAGACCCCTCTTATCAACATGCCGCCTGTACAGCACTCTTCGTCTCAGCAACAAGATCCCTTACTATCACAGCAATCACAACAGAACAACAGTACAGGGTCAGGAAACATGGTCGGCTCATCCAACTCACAGCTGTCAACTCCTTCAACGCATACCCCTGTCGAAGGAGATGCTATGACTGGTAACATGCCAAAAGGGCCAATGATGTATGGTTCTGATGCAATAGGTGGTCTTGCATCATCAGCAAACCAACTGTGGCAACAAGGTAAAGCGGAGGAGGAGCAAATTCAAATGAAGCAACTCAATCCAGTGAACACTGAGACATCAGGAACAAACAATCATGGTGAGATGGTCCAAAGGAATGATCAAGGAGGAGATGTATCGGCAGCAATACTGAAGCAACTTAAGTCACAAACTCAGCAGACCCCTTTGGAAGCTGGAGAAGGAGAATCACGTAAGCGATGCAAATGCAAAAAGTCCAAGTGTTTGCAACTTTTATGTGAATGCTTTTCTACTGGAGTCTATTGTACTACAGAGCCGCCATGCTCATGTACAGATTGCTTCAACAAACCTATTCATGAAGATACCGTCTTGGCTCCTGCTCGCAAAAAGTATGAGTCTCGGAACCCATTTGGATTTGCTCCTAGAGTCATCAGGAGCTCCCATTCAGTTATGAAAACCAGGGAAGAGGAGGATGCAAGCAAAAGTCCAGCTTCTGCTCGCCGTAAAAGTGGCTGCAACTGCAAGAAATCAAACAGTCAGAAATACTGTCAATGCTTTAAGGGTGGTGTGGGCTGTACCGTAAACTGTAAATGTGAAGGGTGTGAGAACAGATTCGGCGTCAAAGCTTCAGAGACCCCCTGGCAATGCTTGATCTCTAGTTTTGAAGATCGAATTAGAGTTTCGAAACACACTGATTCGTTTGGGCTTACTCAGGTTACTCGATCTCTGGCTGGAGCTATGGCGCAGAGTAATTGGGAAGCGGATAAGATGCTTGACGTTTACATATATGATTATTTGGTGAAGAAGAAACTTCATAACACTGCTAAGTCCTTTATGACTGAAGGCAAAGTCTCTCCTGATCCTGTTGCGATTGATGCTCCTGGTGGGTTTCTTTTTGAGTGGTGGTCTGTGTTCTGGGACATCTTTATTGCAAGGACGAATGAGAAGCATTCTGAGTCTGCTGCAGCTTATATAGAGGCGCAACAAGGTAAAGCGAAGGAGCAGCAAATGCAATTGCAGCAGCTGCAGATGATGCGCCAAGCTCAAATGCGTAGGGATCCTTCTCTTGGGGGTCCGATGAATGCTATTGTTTCTGATGGGATGGTTGGGCAGTCTAATAATGCCAGTGCTATGGCTGCAAAAATGTACGAGGAACGTATGAAGCAACCTAATCCAATGAACGCTGAGACATCCCAACCCCATATGGATCCGAGGATGGCCCTTCTCAAATCAGGAACAAGCCATCATGGTCAGATGGTCCAAGGGAATCATCAAGGAGGTGTTTCGGCAGCACTGCAGCAACTTCAGTCACGAACTCAGCAGACCCCTGAAATCAAAAGTGAAGTAAATCTTGGAGCATCTCCAAGACAACTGCCAGTGGATCCGTCTACAGTTTATGGCCAGGGGATTCTGCAATCGAAGCCTGGGATGGGGAGTGCAGGATTAAATCCTGGAGTTGGTGTTCTTCCTTTGAAGGGATGGCCATTAACTGGCATCGATAATATGCGACAAGGTCTAGGCCCTCAGGTTCAGAAAGCTTTCCTTCAAAATCAAGGTCAATTTCAGCTCTCACCACAGCAGCAGCAACAACAACAGATTATGGCTCAGGTTCAAGGGCAAGGAAATATGACTAATTCGTCCGTGTATGGCGACATGGACACTCGCAGATTTTCAGGATTGCCCAGAGGAAACCTGAATTCGAAAGATGGCCAACAGAATGCAAATGATGGTTCTATTGGATCCCCCATGCTGTCAAATTCGTCAAAACTTATAAACATGCCGCAAGTACAGCAATCTTCTTCTCAGCAACAAGATCCTTTACTATCACAGCAATCACAGCAGAACAACCGCAAAAGAAAAGGACCTTCATCTTCTGGTCCTGCTAACAGCACAGGGACAGGAAACACGGTCGGCCCATCCAACTCACAGCCGTCAACTCCTTCAACGCATACCCCTGTCGAAGGAGTTGCTATGACTGGAAATATGCAGCATGTGAATAACATGCCAAAAGGGCCAATGATGTATGGTTCTGATGCAATAGGTGGTCTTGCATCATCAGCAAATCAACTGCTGCAGGATGACATGGAACCGTTTGGAGATGTGGGAGCCCTAGAAGATAACGTTGAATCGTTTTTATCCCAAGATGATGGAGATGGAGGAAGCTTGTTTGGCACCCTAAAGCGGAACCCTTCTGAGCATACCGAAACCTCAAAGGTTTTTAGTTTCAATGAGGTTGGCTCTATAAGAAGAAGTGCCAGTAAGGTCATCTGCTGTAACTTCTCATCTGATGGAAAATTGTTGGCTAGTGCTGGACATGATAAGAAGGTGTTTATTTGGAACATGGAAACGCTACACACTGAGATCCCTCCGGAAGAACATGGTCATATCATCACAGATGTTCGTTTCCAACCTAATTCAACTCAACTGGCTACGTCGTCTTTCGACAAAACTATCAAAATATGGGATGTTTCTAAGCCTGGTTACTTAGTACGAACAATTTCTGGTCACAATGCACCTGTAATGTCCCTTGATTTTCACCCGAAGAAAACCGATCTTTTCTGCTCTTGTGATACCAACAATGAGATTCGTTTCTGGAGCATCAACGCTGCTAATTGCCTTCGTGCACAGGGTGCTAGCACGCAAGTACGGTTTCAGCCAAAACTTGGACAAATGCTTGCTGCAGCTTCGGAAAATATTGTGTCAATTTTCGATGTTGAACAGTACAGAGGGGTCCATTCGTTTAAGGGACATTCCTCAAGTGTGCATTCTATTTGTTGGAACCCAACCGGAGAGTTGGTAGCTTCTCTTAGCGAAGACAGTGTTAAAGTATGGTCTGTGGGCTCAGGAGAATGCATCCACGAGCTCAGTTCTAGTGGAAACAAATTCCACTCTTGCGTTTATCACCCTACCTATCCCAATCTCTTGGTCATCGGTGGTTACCAGTCACTGGAGCTGTGGGACACAGGAGAGAACAAATGTATGACAATAGCGGCTCACGAGTGTGTGATCTCTGCCTTAGCTCAGTCATCTTCTACAGGAATGATGGCGTCTGCAAGTCATGACAAGTCTGTAAAGATTTGGAAGTAG
Protein Sequence:
- >GSBRNA2T00142012001|Brassica_napus|CPP|GSBRNA2T00142012001
MAQSNWESDKMLDAYIYDHLVKKKLHNIAKSFVTEGKVSPDPVAIDAPGGFLFEWWFVFWEMFYARTKEKHDESVVEYGLNVYIFDYLVKKKLHYTAKLFMTEVKVSPDNVAIDDPRGFLSEWWSLFWDVYIAKTNEKHSESTAEAQQGKAKEQMKQPNPINTETSQTHMDAGTIHHGQMVQGNNQGGVSAALQSRTQQTPLINMPPVQHSSSQQQDPLLSQQSQQNNSTGSGNMVGSSNSQLSTPSTHTPVEGDAMTGNMPKGPMMYGSDAIGGLASSANQLWQQGKAEEEQIQMKQLNPVNTETSGTNNHGEMVQRNDQGGDVSAAILKQLKSQTQQTPLEAGEGESRKRCKCKKSKCLQLLCECFSTGVYCTTEPPCSCTDCFNKPIHEDTVLAPARKKYESRNPFGFAPRVIRSSHSVMKTREEEDASKSPASARRKSGCNCKKSNSQKYCQCFKGGVGCTVNCKCEGCENRFGVKASETPWQCLISSFEDRIRVSKHTDSFGLTQVTRSLAGAMAQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSESAAAYIEAQQGKAKEQQMQLQQLQMMRQAQMRRDPSLGGPMNAIVSDGMVGQSNNASAMAAKMYEERMKQPNPMNAETSQPHMDPRMALLKSGTSHHGQMVQGNHQGGVSAALQQLQSRTQQTPEIKSEVNLGASPRQLPVDPSTVYGQGILQSKPGMGSAGLNPGVGVLPLKGWPLTGIDNMRQGLGPQVQKAFLQNQGQFQLSPQQQQQQQIMAQVQGQGNMTNSSVYGDMDTRRFSGLPRGNLNSKDGQQNANDGSIGSPMLSNSSKLINMPQVQQSSSQQQDPLLSQQSQQNNRKRKGPSSSGPANSTGTGNTVGPSNSQPSTPSTHTPVEGVAMTGNMQHVNNMPKGPMMYGSDAIGGLASSANQLLQDDMEPFGDVGALEDNVESFLSQDDGDGGSLFGTLKRNPSEHTETSKVFSFNEVGSIRRSASKVICCNFSSDGKLLASAGHDKKVFIWNMETLHTEIPPEEHGHIITDVRFQPNSTQLATSSFDKTIKIWDVSKPGYLVRTISGHNAPVMSLDFHPKKTDLFCSCDTNNEIRFWSINAANCLRAQGASTQVRFQPKLGQMLAAASENIVSIFDVEQYRGVHSFKGHSSSVHSICWNPTGELVASLSEDSVKVWSVGSGECIHELSSSGNKFHSCVYHPTYPNLLVIGGYQSLELWDTGENKCMTIAAHECVISALAQSSSTGMMASASHDKSVKIWK*