Gene Details:
- Gene ID: AHYPO_017697-RA
- Gene Family: CPP Family
- Description: CPP Family protein
- Species: Amaranthus hypochondriacus
- Source: CPP family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: XP_021862324.1 — protein tesmin/TSO1-like CXC 5
- Swissprot: Q9SZD1 — TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
- TrEMBL: A0A0K9QRU4 — A0A0K9QRU4_SPIOL; Uncharacterized protein
- STRING: XP_010688245.1 — (Beta vulgaris)
Family Introduction:
- CPP-like (cystein-rich polycomb-like protein) proteins are members of a small transcription factor family whose typical feature is the existence of one or two similar Cys-rich domains termed the CXC domain. The members of this family are widely present in plants and animals but absent in yeast, and the CXC domains of CPP-like proteins show high conservation across species from amoebae though plants to mammals (Andersen et al. 2007; Riechmann et al. 2000). CPP-like genes play an important role in development of reproductive tissue and control of cell division in plants.
Literature:
- Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice. DOI: 10.1007/s00239-008-9143-z ; PMID: 18696028
Sequences:
CDS Sequence:
- >AHYPO_017697-RA|Amaranthus_hypochondriacus|CPP|AHYPO_017697-RA
ATGGAGGAGAGAATAAAAGGCGGGAGTTTGCCTCCAAAATCGACTATGACAGCTGATTTTCCGGCGAAGAAGCTCGCTAGACAGCTTGATTTCACCTTCGTTAATGGCGCGTCTCAACTGCCTTCCACGTCAGTTGCTAGGCCATTGTACACATTAGCTGCTCAACCGTTCCCCATTCTGCCGTCTTCGCAGCCGCAGTTGGTAATGATTGGGTCGTTACCGCAGACATTGGCTCAAACGCCACCTGTAACTCCGATTCGGTCGATAAAGACAGAGTCTCCCAGTCCACGCTTACGGTCTAATGCTGAAGTCAAAGATGGTACCCCCAGGAAACAGAAGCTGTGTAACTGTAAAAATTCACGATGCCTGAAGTTGTATTGTGAGTGCTTTGCATCTGGAGTGTATTGTGATGGCTGCAATTGTAATAATTGCTGTAATAATGTTGATAATGAGGTTGTTCGAAGAGAGGCTGTTGAAGCTACATTAGAACGTAACCCAAATGCTTTTAAGCCGAAAATCGCTAGCAGTCCACAAGGCAAGAATAACAACATGGAAGATACCGGAGATGTTTTAGTGGCAAAGCACAACAAGGGGTGCAACTGCAAGAAGTCAGGGTGTCTGAAGAAGTACTGTGAGTGCTTCCAGGCAAATATCTTATGCTCAGATAATTGCAGATGCATCGATTGCAAAAACATTGAAGGAAGGGAAGAGTGGCATGATCTTAGCCGCGACAATCATGTAAATAACTCGACTTATGTGCATGAGGCAGCCCATGCTTCTATTACTGGAGCTATTGCATCATCTGGTTACATTTCTACTCTCATTTCTAGGAAATGGAATGGGCAGGAGCTCTTGTTTGGCAAAACATTGAAGTCTCTTTTGGCTGATATCATACAACCCCAAGATGTTGAGGAGCTCTGCTCAGTTTTGGTAGAATTTTCTGAAGATGCCAAGACAATAGCAGAATCTAAGAGTGCTGATGAAAACCAAGAGGAAGCAGGAAAAACATCACAAGCGTTACGAACTAAGAACAGATATCAAAATCAAGGTGAAATGTCAGATTTGAAACCTACACTTGATACCAGCAGAAACCAAACCAACAGAAACGGCCCTGATGCTTTCAATTTAGATGGATACGATCTACCAAACTCCAGGCCGATGTCCCCTTTAACTTTAGCTTTGAGGTGTGATGAGCAAGACGCAATGTTTGTGGCTGATGGTTCTTCTAATGGGTTGACCAATCATGGTCATTTATCATCTTTGCAATTGCCGGATCAGAGCTCCTCAGAGGTTTATGCTGAGCAAGAGAGAATTGTATTGACAGTGTTCCGAGATTGCCTCAATAGGATAATTACATTGGGAAAATCAAAAGAAACAAAATGTTCTTCCTTAGCTAGATCAGAATTGACAAGATTTCATGGAAGCGACAATGGTACAGCAAAATTGAGAATTGATGGTCAGAAGCAGGAAGAGCATTCTAACAATAGTGTTTCTGAACCCGTCACTCCAACACCAGTTGTTACTGCACAAAATAACATTCCTGTAATTACTGCTGCTACTATACCTGCTGTTTCATCCATATATCTCGTCTCCCAATATCCTCCTGTAACTGTACATGGTGATTCATAA
Protein Sequence:
- >AHYPO_017697-RA|Amaranthus_hypochondriacus|CPP|AHYPO_017697-RA
MEERIKGGSLPPKSTMTADFPAKKLARQLDFTFVNGASQLPSTSVARPLYTLAAQPFPILPSSQPQLVMIGSLPQTLAQTPPVTPIRSIKTESPSPRLRSNAEVKDGTPRKQKLCNCKNSRCLKLYCECFASGVYCDGCNCNNCCNNVDNEVVRREAVEATLERNPNAFKPKIASSPQGKNNNMEDTGDVLVAKHNKGCNCKKSGCLKKYCECFQANILCSDNCRCIDCKNIEGREEWHDLSRDNHVNNSTYVHEAAHASITGAIASSGYISTLISRKWNGQELLFGKTLKSLLADIIQPQDVEELCSVLVEFSEDAKTIAESKSADENQEEAGKTSQALRTKNRYQNQGEMSDLKPTLDTSRNQTNRNGPDAFNLDGYDLPNSRPMSPLTLALRCDEQDAMFVADGSSNGLTNHGHLSSLQLPDQSSSEVYAEQERIVLTVFRDCLNRIITLGKSKETKCSSLARSELTRFHGSDNGTAKLRIDGQKQEEHSNNSVSEPVTPTPVVTAQNNIPVITAATIPAVSSIYLVSQYPPVTVHGDS*