Information report for Tp57577_TGAC_v2_mRNA3378
Gene Details
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Functional Annotation
- Refseq: XP_013447714.1 — zinc finger protein CONSTANS-LIKE 2
- Swissprot: Q96502 — COL2_ARATH; Zinc finger protein CONSTANS-LIKE 2
- TrEMBL: A0A2K3PM88 — A0A2K3PM88_TRIPR; Zinc finger protein CONSTANS-like 2-like
- STRING: XP_004491763.1 — (Cicer arietinum)
- GO:0009658 — Biological Process — chloroplast organization
- GO:0009909 — Biological Process — regulation of flower development
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0048576 — Biological Process — positive regulation of short-day photoperiodism, flowering
- GO:0048579 — Biological Process — negative regulation of long-day photoperiodism, flowering
- GO:0005622 — Cellular Component — intracellular
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- CO(CONSTANS) gene acts between the circadian clock and genes controlling meristem identity.In Arabidopsis, CO transcription factors defined by two conserved domains. The first is a zinc finger region near the amino terminus that resembles B-boxes, which regulate protein-protein interactions in several animal transcription factors. The second is a region of 43 amino acids near the carboxy terminus termed the CCT (CO, CO-like, TOC1) domain. Studies using green fluorescent protein fusions show that the CCT domain is involved in nuclear localization of the CO protein but must have an additional role because the late-flowering co-7 mutant, which has an altered CCT domain, correctly localizes the protein.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004491763.1
- Gossypium hirsutum: Gohir.A12G057200, Gohir.D12G056900, Gh_D12G0543
- Juglans regia: WALNUT_00008042-RA, Jr01_01600
- Lotus japonicus: Lj1g3v3102660.1
- Medicago truncatula: Medtr7g018170.1, Medtr7g018170
- Populus trichocarpa: Potri.017G107500.1, POPTR_017G107500v3, Potri.017G107500.2
- Prunus mume: XP_008230340.1
- Prunus persica: Prupe.3G245100.1.p, PRUPE_3G245100
- Ricinus communis: 29496.m000135
- Rosa chinensis: RchiOBHm_Chr2g0164091
Sequences
CDS Sequence:
- >Tp57577_TGAC_v2_mRNA3378|Trifolium_pratense|CO-like|Tp57577_TGAC_v2_mRNA3378
ATGTTGGAGCACGAATTCCTCACCACCACCTCGGCCACCGGAAGTGTTAGGTCTGCGGTCACGTGGCCACGTGCATGTGACACATGCCGCTCTGCTCCATGCGCGGTATTCTGCCGCGCAGACTCAGCATATTTATGCGCTGGGTGCGATTCGCGCATCCATGCAGCAAACCGAGTAGCCTCGAGGCACGAGCGTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGCAGCAAACCGAGTAGCCTCGAGGCATGAGCGTGTTTGGGTCTGTGAGGCCTGTGAGCGTGCCCCGGCGGCTTTTCTTTGTAAAGCTGATGCTGCTTCTCTTTGCTCCTCTTGTGATGCTGATATCCACTCTGCTAACCCTCTTGCCAGCCGCCATCAACGTGTCCCAATTCTCCCAATTTCCGGTTACCTTTACGGTCCTCCGACGACCCTTTTAGGTGCCGACGATGAAGGCTTTGTCGGCGGTGGTTGTGCCGGTGGTGAGGTGGAGGAAGAGGAGGATGAAGGTATGGAAGATGAAGATGAAGCAGCTTCATGGCTTTTGTTGAATCCACTAAAGAATAGCAATAACAATAGTAACAACCACAACAACAACATCAACAACAATAGCAATGATCATAATAATCAAGAGGGTAATAATGGTTTTTTGTTTAGTGGTGAGGTTGATGAGTATTTGGATCTTGTGGATTGTAATTCTTGTGGTGGTGGTGATAACACTTTCACTACCAATACTACTACTACTGCTACTACTCATCATGATGAGTATAGTCATCAACAGCAAGATCATTATGGTGTTCCTCAAAAGAGCTATGTTGGGGATAGTGTTGTTCCTGTTCAACAACAGCAAGTACAGAATTTTCAACTTGGGTTGGAGTTTGAAAATTCCAAAGCTGGATTCAGTTACAATGGTGGTTCTATTAGTCAAAGTGTTTCAGTTTCATCAATGGATGTTGGTGTTGTACCAGAATCAACAATGAGAGATGTCTCAATGAACTATTCAAGAACTTCAAAAGGAACAATTGACCTATTTTCAGGTCCTCCAATTCAAATGTCTTCTCATTTCTCACCAATGGACAGAGAAGCCAGAGTTCTAAGGTATAGAGAGAAAAAGAAAACAAGAAAATTTGAGAAGACAATTAGGTATGCCTCAAGGAAAGCCTATGCAGAGACTCGACCGCGTATAAAAGGTCGATTCGCAAAGCGAACAGATGCAGATGCTGAAGTTGATCAAATGTTTTCCACATCATTAATTACGGAAGTTGGATATGGCATTGTTCCCTCATTCTAA ATGGTTAAGCGAAATTCTACTAAAGAAAAAGAAAAAGTTCCAAACACTAAGATTGTTCATATCAATGGAACAGTGGAAAAGGTTTATCTGAAAAACCATGGAAAGAAGACTTTCACTAGTGAATATAAAGGTGTTCGCCGTAGGTCATGGGGAACATTTGCTGCTGAAATTCATGACCCATTCACCAAAAAAAGACTTTGGCTTGGAAGTTTTGAAAGAGAAGAATTAGCTGCTGTGGCATATAGTCAAAAGTTTGATGAGTTTCAAAGAAAGAAAGCTGAATTTGCATCAAGGGAGGATATGGATCTTAATCAACCATGTAAGGAGCATCATTATAACTATGATGAACCTCCCTCCGATGATGATAACTTTGGTGGTAATTCAAATCAAATGAATTTAGGTGTTCAAGGCATGCAAGAGATTCAACCTTTAATTCATTAG
Protein Sequence:
- >Tp57577_TGAC_v2_mRNA3378|Trifolium_pratense|CO-like|Tp57577_TGAC_v2_mRNA3378
MLEHEFLTTTSATGSVRSAVTWPRACDTCRSAPCAVFCRADSAYLCAGCDSRIHAANRVASRHERVXXXXXXXXXXXXXHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSSCDADIHSANPLASRHQRVPILPISGYLYGPPTTLLGADDEGFVGGGCAGGEVEEEEDEGMEDEDEAASWLLLNPLKNSNNNSNNHNNNINNNSNDHNNQEGNNGFLFSGEVDEYLDLVDCNSCGGGDNTFTTNTTTTATTHHDEYSHQQQDHYGVPQKSYVGDSVVPVQQQQVQNFQLGLEFENSKAGFSYNGGSISQSVSVSSMDVGVVPESTMRDVSMNYSRTSKGTIDLFSGPPIQMSSHFSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDADAEVDQMFSTSLITEVGYGIVPSF*