Information report for Tp57577_TGAC_v2_mRNA1515
Gene Details
|
|
Functional Annotation
- Refseq: XP_013470181.1 — zinc finger protein CONSTANS-LIKE 16
- TrEMBL: A0A2K3KYI0 — A0A2K3KYI0_TRIPR; Zinc finger protein CONSTANS-like 16-like
- STRING: XP_004497095.1 — (Cicer arietinum)
- GO:0005622 — Cellular Component — intracellular
- GO:0016020 — Cellular Component — membrane
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- CO(CONSTANS) gene acts between the circadian clock and genes controlling meristem identity.In Arabidopsis, CO transcription factors defined by two conserved domains. The first is a zinc finger region near the amino terminus that resembles B-boxes, which regulate protein-protein interactions in several animal transcription factors. The second is a region of 43 amino acids near the carboxy terminus termed the CCT (CO, CO-like, TOC1) domain. Studies using green fluorescent protein fusions show that the CCT domain is involved in nuclear localization of the CO protein but must have an additional role because the late-flowering co-7 mutant, which has an altered CCT domain, correctly localizes the protein.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_31872
- Cicer arietinum: XP_004497095.1
- Glycine max: Glyma.10G274300.1.p, Glyma.10G274300, Glyma.20G115600.1.p, Glyma.20G115600
- Juglans regia: Jr06_09750
- Lotus japonicus: Lj5g3v2193970.1
- Medicago truncatula: Medtr1g110870.1, Medtr1g110870
- Populus trichocarpa: POPTR_008G120400v3, Potri.008G120400.1, Potri.008G120400.2, POPTR_010G125100v3, Potri.010G125100.1
- Vitis vinifera: VIT_01s0011g03520, GSVIVT01011897001
Sequences
CDS Sequence:
- >Tp57577_TGAC_v2_mRNA1515|Trifolium_pratense|CO-like|Tp57577_TGAC_v2_mRNA1515
ATGAGTTGTTCAAGTAAGAAAGCTGCAAACGCAGTTGGAGGCAAAACTGCTAGAGCTTGTGACAGTTGCATAACAAAGAGAGCACGTTGGTATTGTGCTGCTGATGATGCTTTTCTATGTCAAGCTTGTGACTCTTCAGTTCATTCAGCTAATTCTTTAGCTAGAAGACATGAAAGAGTTCGTTTGAAAACGGCGTCGTATAAGTCCACCGGTGGCGACGATGAATTCAACAATTCCGGTCCTTTTTCCGGCTTCACTAAGAAAGCAAGAACGCCGAGACAAGGGAAAAACAAATCATCGTCGAGTAATGAACCGGCGAGGAATAATAATAATAATCCGTTCCATCTGGTTCCGGAGATGGGTTTCGATGAAGTGAATTCACTTTCACATGATGAAAATGAGGAGCAACTTCTTTATAGGGTACCGATTTTCGATCCTTTTGTTGCTGAATTATGTAGTACTAGTCCTCCATCAGTTGGTTCGAGTGAAGGAGGACTAGGAACTATAACTATTGCTTCTGATACTTTCGCTCCTGATACTAAAAACATCAGAAGCGAAAACAGAAGTGGTAGTAACAATTATGAGATGGAAAGCTTTCACGGGCTTCTTCCATCTGATATTGAATTAGCCGAATTTGCAGCCGATGTTGAGAGTTTATTGGGTAGGGGACTAGAAAATGAGTGTATAGGGATGGAAGAGTTAGGATTGATTGATACAAAAAATGAGAAGGATAGGGAGTGGGAGTGTATTGGGAAAGTGAAGGAAGAAAGTGAAGAGAGCCATGAAGTTGTAGAGGTAGATAATATAGAGATGATGGGAAAAGAGTCTTCATTTGAATTGAATTTTGATTATGATGAATCTCATGAAACATGTGAAGAGGTGAAGGGTAAGGTTGGTTTGGATATAGAACAAAATGAAAATAATAATTGTAATAAGGGGAAGAGGAAAATATCTTTGCAGCTAGACTATGATGCAATAATCATTGCATGGGATAGCCAAAAGTGTCCATGGACTAATGGTGACAAACCAAATTTGGATGCTGATGAGACCTTGCTTGATTGCATGGGAACTTATGGAACAGAAGTTAATTATCCTTATGGTGAATTTGGTGGATATGGATATAATCCAGTAATGGTAGATGGAGGAAGAGAGGCAAGAGTTTCAAGGTACAGAGAAAAGAGAAGAACAAGGTTGTTTTCGAAGAAAATAAGGTACGAGGTGAGGAAATTGAATGCAGAAAAGAGACCAAGAATGAAAGGAAGATTTGTAAAGAGGGCTTCTTTTGCAGTTCCAACATTTCCTTTGTTAAAATAA ATGGCAACAAGGGGAGATGCAGAAGTCCATGCAGACATTGAAGTTCAACAATCACCTGAAGGACATGATGCAAATCAAGATGAACAAGTTCTCAACATGCAGAATGATGCAAATGCTATGCTGGATATTGAAAGGGCTAGGAAAGGAAAAATGCCAATGATTTATTCTGAAGGAGTCTGCGCCGAAGAAACTGTTCCTGTTGCTGATGATGAAGTTCCAAATGCACCTCTGCCTAACGGACATGATGCAAATCAAGACGAACAAGTTGTCGATATGCAGAATCATGATGCAAATGCAATGCTGGAAATTCAAAGGGCTAGGAAAGGAAAAATGCCAATGAATTATTCTGAAGGAGTTTGTGCCGAAAAAACTGTTGCATTTTATGATCAAGTATCAACTGATGAGGAAATTCCAAATGCAATTGCTGATGATGAAGAAAGTCACATTGGTGGAGCTTCTCCAAAAAGGAAGAGGAATATGGATCTCTCTGAATACTATAAACCACCTCGCGCTAGGATCGGGCCAAAATCAGTGATCCGAGTTGAAAGCGAGGAAGACATTCTGGACGATGGTTATCACTGGCAAAAGTATGGACGAAAGTATGTCAAAGGAAATCCTAATCACCCAAGGGCGTATTACAGGTGCACACATCGAACCTGTGATATAAGAAAACAAGTAGAGAGGGACGCACGCTATCCACAATTTGTAATTGTTTCTTATGAAGGGAGACATAATCATAAGGTTCCGGGCCCCAGACAAAGAAGCCGGACGTTTACTCCCTTTACTCCAACTGTACCGGTAGTATATGCTGACATGCCCCCGCCACCACCATCGGCAACACCCGTAACTCTTTCTTTCACTCCATTTAACAATCCAAATAACAAATTCATCCATGGTTATAGACCTTATAATTTGGATTTTGATCGGCCGAACGATAGTTTCTTGAACATACCTCATACGAGGCCTTATGATTTTGTTCAGCCGAACAATAGTTCTCCGGGATTTTCATTATCGCCACCACTTCCACCATCTGATGGTCGTGGTTTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGAGGAAGAGGAAGCTAATGATGTTCCTAACAATGAATGA
Protein Sequence:
- >Tp57577_TGAC_v2_mRNA1515|Trifolium_pratense|CO-like|Tp57577_TGAC_v2_mRNA1515
MSCSSKKAANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANSLARRHERVRLKTASYKSTGGDDEFNNSGPFSGFTKKARTPRQGKNKSSSSNEPARNNNNNPFHLVPEMGFDEVNSLSHDENEEQLLYRVPIFDPFVAELCSTSPPSVGSSEGGLGTITIASDTFAPDTKNIRSENRSGSNNYEMESFHGLLPSDIELAEFAADVESLLGRGLENECIGMEELGLIDTKNEKDREWECIGKVKEESEESHEVVEVDNIEMMGKESSFELNFDYDESHETCEEVKGKVGLDIEQNENNNCNKGKRKISLQLDYDAIIIAWDSQKCPWTNGDKPNLDADETLLDCMGTYGTEVNYPYGEFGGYGYNPVMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAVPTFPLLK*