Information report for NNU_024887-RA
Gene Details
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Functional Annotation
- Refseq: XP_019051772.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051773.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051774.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051775.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051776.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051777.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051778.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051779.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051780.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- Refseq: XP_019051781.1 — PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform X1
- TrEMBL: A0A1U8PZ06 — A0A1U8PZ06_NELNU; zinc finger protein CONSTANS-LIKE 13-like isoform X1
- STRING: XP_010245382.1 — (Nelumbo nucifera)
- GO:0005622 — Cellular Component — intracellular
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- CO(CONSTANS) gene acts between the circadian clock and genes controlling meristem identity.In Arabidopsis, CO transcription factors defined by two conserved domains. The first is a zinc finger region near the amino terminus that resembles B-boxes, which regulate protein-protein interactions in several animal transcription factors. The second is a region of 43 amino acids near the carboxy terminus termed the CCT (CO, CO-like, TOC1) domain. Studies using green fluorescent protein fusions show that the CCT domain is involved in nuclear localization of the CO protein but must have an additional role because the late-flowering co-7 mutant, which has an altered CCT domain, correctly localizes the protein.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: CEY00_Acc19613
- Citrus sinensis: orange1.1g016554m, orange1.1g016553m
- Juglans regia: WALNUT_00016260-RA, Jr11_13970
- Nicotiana attenuata: A4A49_40046
- Nicotiana benthamiana: Niben101Scf00823g01006.1
- Nicotiana tabacum: XP_016509923.1, XP_016495983.1
- Prunus avium: Pav_sc0000848.1_g470.1.mk
- Prunus persica: PRUPE_8G253900, Prupe.8G253900.2.p, Prupe.8G253900.1.p
- Ricinus communis: 29647.m002019
- Solanum tuberosum: PGSC0003DMG400011378, PGSC0003DMP400020149
- Vitis vinifera: VIT_07s0104g01360, GSVIVT01010991001
- Ziziphus jujuba: XP_015891636.1
Sequences
CDS Sequence:
- >NNU_024887-RA|Nelumbo_nucifera|CO-like|NNU_024887-RA
ATGGTTAATTTTAGAGGGGACCCTGGACGTCGCGAACAACAACAGCCGAGATATGTGGTAGAAGAAGCAGCTGAACAAGATGAGCAACTACAACAGCAGCAGCACTTGGCTGCAAAAGTAACGCTGCATGGTCTCTGTGATTTCTGTGGAGAATCCAGAGCTCCCTTATACTGCCGGGCCGACACAGCTAAGCTTTGTTTCTCCTGCGACCGTGAAGTCCACTCGGGGAACCCACTCTTCGGTAAGCACTCTCGCTCGCAGCTTTGCGATGCTTGTGCTTCTAAGCCGGCTTCAATCTTCTGTTCCACGGACAATCTCGTTCTTTGCCAGAACTGCGATTGGGATGCTCATGGTGGTTGCTCTTCCTCATCCTCATCCTCTCTTCACGACAGGAGGCCTCTCGAGGGGTTCTCTGGTTGTCCTTCGGCGGTTGACTTGTCTTCCATTCTTGGGTTTGAAGACGTGGGGAACAAGTCTCTGTTACTGATGGGGGACGCCATGGATGATTGCTTGGTGGTCTCTGGTCCCTATGGATCGATGGGGATGGCTGATAGTTTCACGGATGAGTTAGTACGGGACACTCCTGTTGTTAGTTTTGACGATCTTATTGTTTCGAGTGATTCCACTCATAACTTCCTACCTATGGTGGTTCCTCCTCTTCCCAAGAACAGGAAATCAGCTTGTGGGAAACACAAAGAAGAGATATTACGTCAGCTCTGCAAACTGGCAAAGTTGGAGAGAAGCTTGAGTTCAGAAAATGGGGTGGTCGAATCATTTCTTGGACTCCAACCCTCAGTACAGGAACGAAGCTTCCAGACTGGATATGTAGATACAGGAATAGAACATGGGACAGGGCCAACCTTAGCACCTGGTTTCGATGTAAATGCATTTCAATGGCATGGTGACTATAGTGAGGCAGCAGATCAGGTTCCCATTTTGATTACCTTTCCAGATAACCGTTCAGAGGAAAATTTTCTAGTTCTTGGTGAACCTGGGGAAGATGGTAGCAGTGGAAGTCATACTAATGTTGGTTGCAAAGAGCAGTCACAGCATCTCATCATCAGAGAGAGCTTGCAAGGCTTGCAAAAAGTTGGTCAGCATGAACCAACCAGAATTGACAGGGACTTGGCGATCTCACGGTACAAAGAAAAGAAGAAAGCAAGAAGATACAACAAACACATCTGGTATGAATCCCGGAATGTTCGTGCGGAAGGCAGGACAAGGATCAAGGGGCGTTTTGCTAAGGCTAATGACTGA
Protein Sequence:
- >NNU_024887-RA|Nelumbo_nucifera|CO-like|NNU_024887-RA
MVNFRGDPGRREQQQPRYVVEEAAEQDEQLQQQQHLAAKVTLHGLCDFCGESRAPLYCRADTAKLCFSCDREVHSGNPLFGKHSRSQLCDACASKPASIFCSTDNLVLCQNCDWDAHGGCSSSSSSSLHDRRPLEGFSGCPSAVDLSSILGFEDVGNKSLLLMGDAMDDCLVVSGPYGSMGMADSFTDELVRDTPVVSFDDLIVSSDSTHNFLPMVVPPLPKNRKSACGKHKEEILRQLCKLAKLERSLSSENGVVESFLGLQPSVQERSFQTGYVDTGIEHGTGPTLAPGFDVNAFQWHGDYSEAADQVPILITFPDNRSEENFLVLGEPGEDGSSGSHTNVGCKEQSQHLIIRESLQGLQKVGQHEPTRIDRDLAISRYKEKKKARRYNKHIWYESRNVRAEGRTRIKGRFAKAND