Gene Details:

  • Gene ID: Gorai.004G030300.1
  • Gene Name: B456_004G030300, LOC105790222
  • Gene Family: CO-like Family
  • Description: CO-like Family protein
  • Species: Gossypium raimondii
  • Source: CO-like family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  NP_001314107.1  — zinc finger protein CONSTANS-LIKE 5-like
  • Refseq:  XP_012473161.1  — PREDICTED: zinc finger protein CONSTANS-LIKE 5-like
  • Swissprot:  Q9FHH8  — COL5_ARATH; Zinc finger protein CONSTANS-LIKE 5
  • TrEMBL:  A0A0D2MSU7  — A0A0D2MSU7_GOSRA; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R253  — A0A0D3R253_GOSHI; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R2E2  — A0A0D3R2E2_GOSHI; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R2F5  — A0A0D3R2F5_GOSHI; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R2G2  — A0A0D3R2G2_GOSTO; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R2I1  — A0A0D3R2I1_GOSBA; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R2X7  — A0A0D3R2X7_GOSBA; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R2Y4  — A0A0D3R2Y4_GOSDA; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R325  — A0A0D3R325_GOSBA; CONSTANS-like 6 protein
  • TrEMBL:  A0A0D3R341  — A0A0D3R341_GOSMU; CONSTANS-like 6 protein
  • TrEMBL:  W5QLX8  — W5QLX8_GOSHI; CONSTANS-like 6 protein
  • STRING:  Gorai.004G030300.1  — (Gossypium raimondii)

Gene Ontology:

  • GO:0005622  — Cellular Component — intracellular
  • GO:0005515  — Molecular Function — protein binding
  • GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

  • CO(CONSTANS) gene acts between the circadian clock and genes controlling meristem identity.In Arabidopsis, CO transcription factors defined by two conserved domains. The first is a zinc finger region near the amino terminus that resembles B-boxes, which regulate protein-protein interactions in several animal transcription factors. The second is a region of 43 amino acids near the carboxy terminus termed the CCT (CO, CO-like, TOC1) domain. Studies using green fluorescent protein fusions show that the CCT domain is involved in nuclear localization of the CO protein but must have an additional role because the late-flowering co-7 mutant, which has an altered CCT domain, correctly localizes the protein.

Literature:

Sequences:

CDS Sequence:
  • >Gorai.004G030300.1|Gossypium_raimondii|CO-like|Gorai.004G030300.1
    ATGGGAATCGAAATAAGCGGCGGCACGATCATTCCAGGAGGTTGGGGGGCCGCCGCCATGGCTGTCGCGGCTAAGACATGCGACGCATGTAAATCATCGGCGGCAGCTATCTTTTGTCGTACTGATTGGGTCTTTTTATGCTTGAATTGTGATTCCAATTTCCATTCCGGTCACGAAAGGGTGTCTATGTGTGAAGTTTGCGAACAAGCTCCGGCGGCTGTCACTTGTAAAGCCGACGCGGCGGCTCTCTGTGTCACTTGCGACGCCGATATCCATTCAGCGAACCCACTGGCTCGCCGTCACGAACGTGTACCCATCGAACCTTTCTACGACTCCGCTGATTCCATCGTCAAATCTTCCCCTTTTAGCTTCCTTGTGCCGACGACGGATCATAATGGTACTAATTGTAAACAAGAAATTGAATCTAACAAAGGGGATTTTTTTTTCACAGAAATGGATCGGTTTATCGATTTCGGGTACCCGAATTCATCTCAACATCTTCATGATGCCGCCATGGATAGCGTTGTTCCAGTTCAAACTCCAAAACCAGTCATTCCACTGATCAACGATGGAAGCTGTTTCGATACTTTCAGCTATCAAACTCAATCATCTCTCAGTCATAGCGTTTCATCATCGTCGCTTGAAGTAGGAACAGTTCCAGATGGGAATTACCACGCGACACAAGTGGGTGGTTCAATCGATCGAGAAGCTAGGGTTTTAAGGTACAAAGAGAAGAGAAAGAACAGGAAATTCGAGAAGACAATACGATACGCTTCAAGAAAGGCTTACGCTGAATCAAGACCAAGAATCAAAGGTCGATTTGCTAAAAGAACAGAAACCCACAACGATGATGTTGATCACATGTTCAATAACTCTTCTTTTGCTGTTGGTCCTGCTGGTTTCATGGCGGAAACAGACTATGGTGTCGTTCCATCGTTTTGA
Protein Sequence:
  • >Gorai.004G030300.1|Gossypium_raimondii|CO-like|Gorai.004G030300.1
    MGIEISGGTIIPGGWGAAAMAVAAKTCDACKSSAAAIFCRTDWVFLCLNCDSNFHSGHERVSMCEVCEQAPAAVTCKADAAALCVTCDADIHSANPLARRHERVPIEPFYDSADSIVKSSPFSFLVPTTDHNGTNCKQEIESNKGDFFFTEMDRFIDFGYPNSSQHLHDAAMDSVVPVQTPKPVIPLINDGSCFDTFSYQTQSSLSHSVSSSSLEVGTVPDGNYHATQVGGSIDREARVLRYKEKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETHNDDVDHMFNNSSFAVGPAGFMAETDYGVVPSF*