Gene Details:
- Gene ID: FANhyb_rscf00000660.1.g00008.1
- Gene Family: CO-like Family
- Description: CO-like Family protein
- Species: Fragaria x ananassa
- Source: CO-like family gene from PlantTFDB
Protein Features:
- PROSITE profile: PS50119
- SMART: SM00336
- Pfam: PF00643
- Pfam: PF06203
- PROSITE profile: PS51017
- InterPro: IPR000315 IPR010402
Annotation Proteins:
- Refseq: XP_011463093.1 — PREDICTED: putative zinc finger protein CONSTANS-LIKE 11 isoform X1
- TrEMBL: A0A2P6S2F3 — A0A2P6S2F3_ROSCH; Putative transcription factor C2C2-CO-like family
- STRING: XP_004289156.1 — (Fragaria vesca)
Gene Ontology:
- GO:0005515 — Molecular Function — protein binding
Family Introduction:
- CO(CONSTANS) gene acts between the circadian clock and genes controlling meristem identity.In Arabidopsis, CO transcription factors defined by two conserved domains. The first is a zinc finger region near the amino terminus that resembles B-boxes, which regulate protein-protein interactions in several animal transcription factors. The second is a region of 43 amino acids near the carboxy terminus termed the CCT (CO, CO-like, TOC1) domain. Studies using green fluorescent protein fusions show that the CCT domain is involved in nuclear localization of the CO protein but must have an additional role because the late-flowering co-7 mutant, which has an altered CCT domain, correctly localizes the protein.
Literature:
- The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis. DOI: 10.1104/pp.102.016188 ; PMID: 12692345
Sequences:
CDS Sequence:
- >FANhyb_rscf00000660.1.g00008.1|Fragaria_x_ananassa|CO-like|FANhyb_rscf00000660.1.g00008.1
ATGGCTCGCCTTTGCTTGAACTGTGATGGATGTGTACACTCAGCCAATGCCTTAGCGCGGAGGCACGCACGTTGGTTTCTATGTGAAAAGTGCAATGATCAGCCTGCAACAGTACGATGCCTAGATGTGAACATGTCCTTCTGCCAAAGTTGCGAGTGGAGTCACAATAATGGGGTTACAGGAATGGCGCACCGGAACCAAGCAATAAGTTTCTATACAGGTTGTCCGTCTTTGTCTGAGATTTTTAGAATATGGTCTGCGGTCCTTGAAGGCAGTTCAGCTTCTGGTGGTTTTGGTGGCAGTGGTTGGGAGTCGCTTGGGGGTACTATGGTGTCAAAGAATGAGAAAAATTGCATTAATAGCTGTAGAGATAGTGAGGCATCTTCGTTTGGAGTAGTGAGTGCAGGCAATAAGTTGAATGAAGTACTAGCAGACTCTAATTGTACTCCCGATTTTGAGCCTTGGATGGCCACATCTACTGTGATTCCATCAAATCCGAACTGCATCCAGCCACAATGCAAAGATCAAACACCGCTACCATTCTTGCCTCAGGAGTCGAGCCAGCTGCCAAAGCTACAGGGTTCTTCAAATCTTAAAGATCTAGGAATTCAGGATGGCAATGATCTATGTGAAGGTCTCAACATGGATGATGTTCCATTAGACGTGGAAAATGATGATGAGCTATTTAGTTGCTCCCAAGGTCCTTCCAGATACCCGTTTGAGGATGGAGAGTTTGATTGTCTATTAATGGACCAGAAAAATTTATCAGTCACCGAGTCTAATGGTCCTCACTGTGACAATGCTATACAACAGGCATCACCATCAAGACAACAAGACTGTACCCTGGGATTTCAGTCGTCCTGTGATAGTGTGATGCCGCCGGTGATGAATGCTGGTTTGCTCATGAATCCTAGTTGCAGCAGGAACATCAATCTGGAGGGATTACTTAATCCTACTGGTCAAGTTCATTCAAGTATATCACTATCACTATCCAGCATCACAAGAGATACAACTCATCCAGATTATCAAGATTGCGGATTGTCGCCCGTCTTTCTATCAGCAGAACCTTGGGACTCTACTTTGGAGGCCGGCAGTCCACGAGCAAGGGACAAAGCTAAGATGAGATATGAGGAAAAAAAGAAAACTCGCACGTTCGGTAAACAAATAAGATATGCCTCTAGAAAGGCTAGAGCTGATACCAGAAAACGAGTCAAGGGAAGATTCGTAAAATCCGGTGAAGAATATGATTACGATCCTCTTACGAGAAGGAGCTTCTGA
Protein Sequence:
- >FANhyb_rscf00000660.1.g00008.1|Fragaria_x_ananassa|CO-like|FANhyb_rscf00000660.1.g00008.1
MARLCLNCDGCVHSANALARRHARWFLCEKCNDQPATVRCLDVNMSFCQSCEWSHNNGVTGMAHRNQAISFYTGCPSLSEIFRIWSAVLEGSSASGGFGGSGWESLGGTMVSKNEKNCINSCRDSEASSFGVVSAGNKLNEVLADSNCTPDFEPWMATSTVIPSNPNCIQPQCKDQTPLPFLPQESSQLPKLQGSSNLKDLGIQDGNDLCEGLNMDDVPLDVENDDELFSCSQGPSRYPFEDGEFDCLLMDQKNLSVTESNGPHCDNAIQQASPSRQQDCTLGFQSSCDSVMPPVMNAGLLMNPSCSRNINLEGLLNPTGQVHSSISLSLSSITRDTTHPDYQDCGLSPVFLSAEPWDSTLEAGSPRARDKAKMRYEEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKSGEEYDYDPLTRRSF