Gene Details:

• Gene ID: evm_27.model.AmTr_v1.0_scaffold00061.184
• Gene Name: AMTR_s00061p00172870, LOC18447549
• Gene Family: CO-like Family
• Description: CO-like Family protein
• Species: Amborella trichopoda
• Source: CO-like family gene from PlantTFDB

Protein Features:

• PROSITE profile:  PS50119
• SMART:  SM00336
• Pfam:  PF00643
• Pfam:  PF06203
• PROSITE profile:  PS51017
• InterPro:  IPR000315    IPR010402

Annotation Proteins:

• Refseq:  XP_006857708.1  — zinc finger protein CONSTANS-LIKE 9
• Refseq:  XP_020531256.1  — zinc finger protein CONSTANS-LIKE 9
• Refseq:  XP_020531257.1  — zinc finger protein CONSTANS-LIKE 9
• Swissprot:  Q9SSE5  — COL9_ARATH; Zinc finger protein CONSTANS-LIKE 9
• TrEMBL:  U5DAE4  — U5DAE4_AMBTC; Uncharacterized protein
• STRING:  ERN19175  — (Amborella trichopoda)

Gene Ontology:

• GO:0007623  — Biological Process — circadian rhythm
• GO:0048579  — Biological Process — negative regulation of long-day photoperiodism, flowering
• GO:0005634  — Cellular Component — nucleus
• GO:0005515  — Molecular Function — protein binding
• GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

• CO(CONSTANS) gene acts between the circadian clock and genes controlling meristem identity.In Arabidopsis, CO transcription factors defined by two conserved domains. The first is a zinc finger region near the amino terminus that resembles B-boxes, which regulate protein-protein interactions in several animal transcription factors. The second is a region of 43 amino acids near the carboxy terminus termed the CCT (CO, CO-like, TOC1) domain. Studies using green fluorescent protein fusions show that the CCT domain is involved in nuclear localization of the CO protein but must have an additional role because the late-flowering co-7 mutant, which has an altered CCT domain, correctly localizes the protein.

Literature:

• The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis.   DOI:  10.1104/pp.102.016188 ;  PMID:  12692345

Sequences: