Gene Details:

  • Gene ID: AT5G15850.1
  • Gene Name: ATCOL1, BBX2, COL1, F14F8_230
  • Gene Family: CO-like Family
  • Description: CO-like Family protein
  • Species: Arabidopsis thaliana
  • Source: CO-like family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  NP_197089.1  — CONSTANS-like 1
  • Swissprot:  O50055  — COL1_ARATH; Zinc finger protein CONSTANS-LIKE 1
  • TrEMBL:  A0A178U9N1  — A0A178U9N1_ARATH; COL1
  • STRING:  AT5G15850.1  — (Arabidopsis thaliana)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0007623  — Biological Process — circadian rhythm
  • GO:0009416  — Biological Process — response to light stimulus
  • GO:0009909  — Biological Process — regulation of flower development
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0008270  — Molecular Function — zinc ion binding
  • GO:0042802  — Molecular Function — identical protein binding

Family Introduction:

  • CO(CONSTANS) gene acts between the circadian clock and genes controlling meristem identity.In Arabidopsis, CO transcription factors defined by two conserved domains. The first is a zinc finger region near the amino terminus that resembles B-boxes, which regulate protein-protein interactions in several animal transcription factors. The second is a region of 43 amino acids near the carboxy terminus termed the CCT (CO, CO-like, TOC1) domain. Studies using green fluorescent protein fusions show that the CCT domain is involved in nuclear localization of the CO protein but must have an additional role because the late-flowering co-7 mutant, which has an altered CCT domain, correctly localizes the protein.

Literature:

Sequences:

CDS Sequence:
  • >AT5G15850.1|Arabidopsis_thaliana|CO-like|AT5G15850.1
    ATGTTGAAAGTAGAGAGTAACTGGGCACAAGCCTGTGATACATGCCGATCAGCCGCCTGCACCGTGTACTGCCGGGCTGATTCTGCCTACTTGTGCTCCAGTTGTGATGCTCAAGTTCATGCTGCCAATCGTCTTGCTTCCCGCCATGAACGTGTTCGAGTCTGTCAATCATGTGAGCGAGCCCCGGCTGCCTTTTTCTGCAAGGCAGATGCTGCATCTCTATGCACAACCTGTGATTCAGAGATTCATTCCGCAAACCCACTTGCTAGACGCCATCAACGAGTTCCAATTCTGCCCATTTCTGAGTACTCTTACAGTTCCACGGCCACTAACCATTCATGTGAGACAACAGTGACAGATCCAGAGAACAGACTTGTGCTTGGTCAAGAAGAAGAGGATGAAGATGAAGCAGAGGCGGCTTCATGGTTGTTGCCTAATTCAGGGAAAAACAGTGGTAACAACAATGGCTTCTCGATTGGGGATGAGTTTCTGAACCTTGTTGATTATAGTTCGAGTGATAAGCAATTCACAGATCAATCCAATCAGTATCAACTAGACTGCAACGTACCTCAGAGGAGCTATGGGGAAGATGGAGTTGTTCCACTTCAAATTGAAGTATCAAAGGGCATGTACCAAGAGCAACAGAACTTTCAGCTGAGTATCAACTGTGGCTCCTGGGGAGCTCTTCGAAGCTCCAATGGTTCCCTCAGTCATATGGTGAATGTTTCATCTATGGACCTGGGAGTTGTGCCGGAGTCAACAACGAGTGACGCAACAGTATCAAACCCAAGATCGCCCAAAGCGGTAACAGACCAACCACCTTACCCTCCAGCTCAGATGCTCAGTCCAAGGGACAGAGAAGCTAGAGTCCTGAGATACAGAGAGAAGAAGAAGATGAGGAAATTTGAGAAGACGATAAGATATGCTTCAAGGAAAGCGTATGCAGAGAAAAGACCACGGATCAAGGGCCGGTTTGCAAAGAAGAAAGATGTCGATGAAGAGGCAAACCAAGCTTTCTCCACAATGATAACATTTGACACCGGATATGGAATTGTTCCATCATTCTGA
Protein Sequence:
  • >AT5G15850.1|Arabidopsis_thaliana|CO-like|AT5G15850.1
    MLKVESNWAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGDEFLNLVDYSSSDKQFTDQSNQYQLDCNVPQRSYGEDGVVPLQIEVSKGMYQEQQNFQLSINCGSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF