Gene Details:
- Gene ID: 678373236
- Gene Family: CO-like Family
- Description: CO-like Family protein
- Species: Utricularia gibba
- Source: CO-like family gene from PlantTFDB
Protein Features:
- PROSITE profile: PS50119
- SMART: SM00336
- Pfam: PF00643
- Pfam: PF06203
- PROSITE profile: PS51017
- InterPro: IPR000315 IPR010402
Annotation Proteins:
- Refseq: XP_022005335.1 — zinc finger protein CONSTANS-LIKE 2-like
- Swissprot: Q96502 — COL2_ARATH; Zinc finger protein CONSTANS-LIKE 2
- TrEMBL: E3TPZ0 — E3TPZ0_HELAN; CONSTANS-like 2
- STRING: Solyc02g089540.2.1 — (Solanum lycopersicum)
- STRING: PGSC0003DMT400026065 — (Solanum tuberosum)
- STRING: A0A087H6F0 — (Arabis alpina)
Gene Ontology:
- GO:0005622 — Cellular Component — intracellular
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction:
- CO(CONSTANS) gene acts between the circadian clock and genes controlling meristem identity.In Arabidopsis, CO transcription factors defined by two conserved domains. The first is a zinc finger region near the amino terminus that resembles B-boxes, which regulate protein-protein interactions in several animal transcription factors. The second is a region of 43 amino acids near the carboxy terminus termed the CCT (CO, CO-like, TOC1) domain. Studies using green fluorescent protein fusions show that the CCT domain is involved in nuclear localization of the CO protein but must have an additional role because the late-flowering co-7 mutant, which has an altered CCT domain, correctly localizes the protein.
Literature:
- The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis. DOI: 10.1104/pp.102.016188 ; PMID: 12692345
Sequences:
CDS Sequence:
- >678373236|Utricularia_gibba|CO-like|678373236
ATGATGAATATGAAGGCCACCGGCGTCCTCTGCGAAGGCTGCCGGGCTGCCGAATCCGCCGTGTACTGCCGGGTGGACGCGGCGTACCTCTGCGTCAGCTGTGACTCACGCATCCACATCACTGCGCTTCATCATGACCGTGTCCGGCTGTGCGCATCCTGCTCGTACGCCCCTGCCGTCGTTCTGTGTAAAGCCGATTCGGCTTCACTCTGCATCGCTTGCGACCATAAAATCCACTCCGCCAATCTTCTGGCAGCACGCCACCACCGCGTCCCAATCCAGCCGATGACGGATGCTATCCCCGGCCCTCCACGGCATACCTTTACTGGGTCTAACATACCGGAAAGCTCTGATGGGGGAGCTATGGAGAACGATGCAGATGAAGATGATGAGGAGGAAGCCGCGTCGTGGCTTCTGCTTAATCCTCCCAACGGCAAGGCCAACCGCAACGACGGCCTGCGGTTCGGCGAGTTTCTCGAGCTCGCTGATTTCGGCTCTTCTCCTAATTTGGATCAGTGTAATAAAGAGGAGAGCAATCAGAAGCAGGAATACAATGTTCACCAAAGACAATTTTTTCAGTTGGGAATGAAGTACGAGGACCCAAAAGCAGTAGACTTCGTCCCTGCATCTTCATTCTACAGCACTCCAAGTATGGCTCCAGATACAGCTACACAGGGCTCATTCTCTCAAACAAAGCAGCTTAGAGATGATGCCTCAGATCCATTCCCAGGCTGTGCGGTGGACAGAGAAGCCAGGGTGTTGAGATACAGAGAGAAGAAGAAGAGCAGGAGGTTCGAGAAGACAATCCGGTATGCCTCCCGGAAGGCATACGCTGAGGTGAGGCCGAGGATTAAAGGCCGGTTTGTCAAACAGGCAGATGGATGA
Protein Sequence:
- >678373236|Utricularia_gibba|CO-like|678373236
MMNMKATGVLCEGCRAAESAVYCRVDAAYLCVSCDSRIHITALHHDRVRLCASCSYAPAVVLCKADSASLCIACDHKIHSANLLAARHHRVPIQPMTDAIPGPPRHTFTGSNIPESSDGGAMENDADEDDEEEAASWLLLNPPNGKANRNDGLRFGEFLELADFGSSPNLDQCNKEESNQKQEYNVHQRQFFQLGMKYEDPKAVDFVPASSFYSTPSMAPDTATQGSFSQTKQLRDDASDPFPGCAVDREARVLRYREKKKSRRFEKTIRYASRKAYAEVRPRIKGRFVKQADG