Gene Details:

  • Gene ID: PH01002143G0030
  • Gene Family: CAMTA Family
  • Description: CAMTA Family protein
  • Species: Phyllostachys heterocycla
  • Source: CAMTA family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_015646432.1  — calmodulin-binding transcription activator CBT-like isoform X2
  • Swissprot:  Q7XHR2  — CBT_ORYSJ; Calmodulin-binding transcription activator CBT
  • TrEMBL:  A0A0E0I0Z0  — A0A0E0I0Z0_ORYNI; Uncharacterized protein
  • STRING:  OS07T0490200-01  — (Oryza sativa)
  • STRING:  ONIVA07G13300.1  — (Oryza nivara)

Gene Ontology:

  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0005515  — Molecular Function — protein binding

Family Introduction:

  • The CAMTA family of calmodulin binding transcription factors comprises six members in Arabidopsis (Bouche et al., 2002; Finkler et al., 2007). Each protein includes an IQ domain for calmodulin binding; ankyrin repeats for protein interactions; the TIG domain, which has nonspecific DNA binding activity; and the CG-1 domain, which has specific DNA binding activity. The CG-1 domain recognizes the core consensus sequence, vCGCGb, referred to as the CG-1 element (da Costa e Silva, 1994). This sequence matches the CM2 sequence, CCGCGT, and overlaps the ICEr1 element. Thus, the possibility was raised that one or more of the CAMTA proteins might have a role in regulating CBF2 expression.

Literature:

Sequences:

CDS Sequence:
  • >PH01002143G0030|Phyllostachys_heterocycla|CAMTA|PH01002143G0030
    ATGGCCTCGCTCGGCGCCAGGCGCCTCGCCGCCTCCCCCTCCCCCGGCGCGGCGGCGCCCGTCCGGTGGCCTCGCCTGGCGCGGCGGCGAACGCCGGCCCGCCTCTCCCGAGCAGACTTGAACTTTGAGAAGCTGAAGGCGGAGGCGGCGTCGCGCTGGTTCCGGCCGAATGAGATCTACGCGGTGTTGGCGAACCACGCAAGGTTGAAGGTCCAGGCACAGCCCATCAACAAGCCCTCGAGTGGTACTGTTGTTCTATATGATCGTAAAGTTGTCAGGAACTTCCGTAAGGATGGCCATAATTGGAAGAAAAAGAAGGATGGCAAGACTGTCCAAGAAGCTCATGAAAAATTAAAGATTGGTAATGAAGAAAGGGTTCATGTCTATTATGCTCGAGGTGAGGATGATCCAAATTTCTTCCGAAGATGCTACTGGCTGCTTGACAAAGAGTTGGAGCGCATAGTTCTAGTGCATTATCGTCAAACATCTGAGGAAAATGCCACAGCACCTCTGAACGCAGAAACCGAAGTTCCAGAAGTTCCTACAATAAATATGATTCAGTATGCCTCTCCTTTGACTTCACCTGATTCAGTTTCTGCTCATACTGAGCTATCTTGTTCTACTGCTGCACCGGAAGAAATTAACTCACATGGTGGCAGAGCAATTTCTAGTGAAACTGACGATCATGGTTCTAGCCTGGAGGAGATCAACTCATTTTGGGCAAATTTATTGGAGTCATCTATGGAAAATGATACTTCTGTTTGCGGTGGATCTTTGGCATCCAGTCAGCAGATTAAACACGACCCAAGGGATTCTGGAAATAACATCTTGAATACCAACACTGCAAGTAATGCTATCTTTGTTCCACCACTTAATGTGACATCAGAAGCTTATGCTACTAATCCTGGCCTCAATCAAGTACATGCTAGTTACTTCGGAGCTCTGAAGCATCAAGAAGACCAGTCTCAATCTCATTTAACATCAGATCTAGATTCTCAATCAGAGCAATTTGTAAGTTCTTTGGTGCAAACTCCAGCGGATGGTAACATTCCTAATGATGTGCCTGCTAGGCAGAACAGTCTTGGAGTGTGGAAGTACTTGGATGATGACAGTCCTTGTTTAGGGGATAATCTAACCTCAGCTATACAGAGCTTCCATCCAGTGACCAACGAAAGGCTCTTCAACATCACTGAGATCTCCCCAGAATGGGCTTATTGTTCTACAGGGAATACCAAGGTCCTGGTGGTTGGGTACTTCTATGAGCAATCCAAGCATCTGACTGAATCTAATATGTATGGTGTCTTTGGTGAAAAATGTGTTGCCGCAGATATTGTTCAAGCTGGTGTTTACCGTTTCATGGCTGGACCACATACACCTGGACTAGTTAATTTTTATTTGACTTTGGATGGGAAAACACCAATCAGTGAGGTTTTGAGTTTTGAGTATCGTACTATCCCTGGCAGTTCATTGATGAGTGACTTGATGCCATTGGAGGATGAGTACAAAAAGTCCAAGCTTCAGATGCAGATGAGACTAGCCCGTTTGCTGTTTGCTACAAACAAGAAAAAGGTTTCACCAAAGTTGCTTGCAGCAGGCAGCAAAGTTTCCAATCTCATCTCAGCATCGCCAGAGAAGGAATGGATGGATCTTTGGAAAACTGCTAGCAATTCTGAAGGCATGTATGTTTCTGTTACTGAGGGCTTGCTTGAACTAGTGTTGCGAAATAGATTGCAAGAATGGCTTCTTGAAAAAGTAGCTGAAGGCCATAAGTCAACTGGCCGTGATGACCTAGGACAAGGACCTATCCATCTGTGTTCTTGTCTAGGCTATACCTGGGCTATTCGCTTATTTGGCTTGTCAGGATTCTCCCTGGATTTCCGTGATTCTTCTGGTTGGACAGCTTTACACTGGGCTGCATGCCACGGGAGGGAAAGAATGGTTGCTGCTCTTTTATCTGCTGGAGCAAATCCAAGCTTGGTTACAGATCCTACTCCTGAGTCCCCTGGTGGATGCACTGCTGCTGATCTGGCAGCAAGGCAAGGTTATGATGGCTTAGCTGCATATCTTGCCGAGAAAGGATTGACTGCACATTTTGAGGCCATGTCACTGTTCAAGGATACTGAGCAATCAGTGGCAAGGACAAGATTAACAAAACTACAAAGCGAGAAGTTTGAGAACCTTAGTGAACAAGAACTTTGCTTAAAAGAATCTTTAGCAGCATATCGAAATGCTGCTGATGCTGCCAGTAATATCCAGGCTGCACTCAGGGAGAGAACTCTTAAGCTTCAAACAAAAGCAATTCAATTGGCCAATCCTGAGATGGAAGCATCTCAGATAGTTGCTGCTATGAAGATTCAGCATGCATTCCGGAATTACAACAGAAAGAAAGAGATGAGAGCTGCTGCACGAATACAGAGTCATTTCCGCACATGGAAGATAAAGAGGAACTTCATGAACATGCGAAGACAAGTTATCAGAATACAAGCTGCATACCGAGGTCATCAAGTGAGAAGGCAGTACTACAAGGTAATATGGTCTGTTGGAGTCGTGGAGAAAGCAATTTTGCGATGGAGAAAGAAGAGAAGGGGCTTGCGTGGCATTGGAACTGGAATGCCAGTAGCAATGACAGTGGATGCAGAACCAGCAAGCACTGCAGAAGAAGACTTCTTCCAGGCCAGTCGGCAACAAGCTGAGGACAGGTTTAATAGATCAGTGGTACGTGTTCAAGCTCTGTTTCGTTCTTATCGGGCACAACAGGACTACCGGAGGATGAAGACTGCTCATGAGGAGGCCAAGTCGGACGCCGCTCGTCACCGGTCGATCGAGCCCGACGCCGTCTCGTCACCCCAACGGTGCCTTGGGGTCGCTTCCATCTCAATTATCGAGACTGGTTTCAATATGCGCCTCCACATGCGTGGTCAGCGTCTTTGGGAGTTTCTTACTGGCGAGTTTCCTTGTACGCCTCGCCCTGCTGAGCCTGTACTCCCCAAGGATGCTTCCGAAGATGCTCGTACAAAGGTATATGAGTCTTTTATGGATGCCATGGAGACTTTTCAGACTCAGTATGCTACCTACAAGACATGGATTGATGGAGATGCTCGTACCTCTGCTATTCTAGTTACTAGTATGGAGGTGCAATTCATTAGAGATGTGGTTGGTTTGGCTTCAGCATAG
Protein Sequence:
  • >PH01002143G0030|Phyllostachys_heterocycla|CAMTA|PH01002143G0030
    MASLGARRLAASPSPGAAAPVRWPRLARRRTPARLSRADLNFEKLKAEAASRWFRPNEIYAVLANHARLKVQAQPINKPSSGTVVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDDPNFFRRCYWLLDKELERIVLVHYRQTSEENATAPLNAETEVPEVPTINMIQYASPLTSPDSVSAHTELSCSTAAPEEINSHGGRAISSETDDHGSSLEEINSFWANLLESSMENDTSVCGGSLASSQQIKHDPRDSGNNILNTNTASNAIFVPPLNVTSEAYATNPGLNQVHASYFGALKHQEDQSQSHLTSDLDSQSEQFVSSLVQTPADGNIPNDVPARQNSLGVWKYLDDDSPCLGDNLTSAIQSFHPVTNERLFNITEISPEWAYCSTGNTKVLVVGYFYEQSKHLTESNMYGVFGEKCVAADIVQAGVYRFMAGPHTPGLVNFYLTLDGKTPISEVLSFEYRTIPGSSLMSDLMPLEDEYKKSKLQMQMRLARLLFATNKKKVSPKLLAAGSKVSNLISASPEKEWMDLWKTASNSEGMYVSVTEGLLELVLRNRLQEWLLEKVAEGHKSTGRDDLGQGPIHLCSCLGYTWAIRLFGLSGFSLDFRDSSGWTALHWAACHGRERMVAALLSAGANPSLVTDPTPESPGGCTAADLAARQGYDGLAAYLAEKGLTAHFEAMSLFKDTEQSVARTRLTKLQSEKFENLSEQELCLKESLAAYRNAADAASNIQAALRERTLKLQTKAIQLANPEMEASQIVAAMKIQHAFRNYNRKKEMRAAARIQSHFRTWKIKRNFMNMRRQVIRIQAAYRGHQVRRQYYKVIWSVGVVEKAILRWRKKRRGLRGIGTGMPVAMTVDAEPASTAEEDFFQASRQQAEDRFNRSVVRVQALFRSYRAQQDYRRMKTAHEEAKSDAARHRSIEPDAVSSPQRCLGVASISIIETGFNMRLHMRGQRLWEFLTGEFPCTPRPAEPVLPKDASEDARTKVYESFMDAMETFQTQYATYKTWIDGDARTSAILVTSMEVQFIRDVVGLASA*