Gene Details:

Protein Features:

Annotation Proteins:

  • Refseq:  XP_004971097.1  — calmodulin-binding transcription activator 4
  • TrEMBL:  A0A0A9AIS6  — A0A0A9AIS6_ARUDO; Uncharacterized protein
  • STRING:  Si000282m  — (Setaria italica)

Gene Ontology:

  • GO:0045893  — Biological Process — positive regulation of transcription, DNA-templated
  • GO:0050826  — Biological Process — response to freezing
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0005516  — Molecular Function — calmodulin binding

Family Introduction:

  • The CAMTA family of calmodulin binding transcription factors comprises six members in Arabidopsis (Bouche et al., 2002; Finkler et al., 2007). Each protein includes an IQ domain for calmodulin binding; ankyrin repeats for protein interactions; the TIG domain, which has nonspecific DNA binding activity; and the CG-1 domain, which has specific DNA binding activity. The CG-1 domain recognizes the core consensus sequence, vCGCGb, referred to as the CG-1 element (da Costa e Silva, 1994). This sequence matches the CM2 sequence, CCGCGT, and overlaps the ICEr1 element. Thus, the possibility was raised that one or more of the CAMTA proteins might have a role in regulating CBF2 expression.

Literature:

Sequences:

CDS Sequence:
  • >Oropetium_20150105_09812A|Oropetium_thomaeum|CAMTA|Oropetium_20150105_09812A
    ATGCAGCAGCAAGGCTTCGACGTACACAAGTTAGAACAGGAAGTCAAGACCCGCTGGCTAAGGCCTAAAGAAGTTCTTCAGATACTGCAGAATCATGAGTGGTTCACAATTGCACATAAGCCCGCCCATAAGCCTCCTAGTGGCTCATGGTTTCTTTACAACCGCAGAGTACTTCGGTTTTTCCGAAATGATGGATACACATGGCAAAAGAAGAGAAATGGGAAGTCCAGTAATGAAGCCCACGAGCGCCTAAAGGTTGACAACATTGAAGCACTAAATTGTTACTATGCTCGTGGAGACCAAAATCCTACATTTCAGAGGCGGATATATTGGATGCTTGATCCGGCTTATGACCACATCGTTCTTGTACACTATAGAGATGTTCAAGAGGGCAGCATTTCGGTATCAGCACGAAACGATTCATCAACATCAAATCAGAATGGCAGTGCTAGTAGAGCTGAAGTACACGGTTCACCTGGCTGGACTAGTGAGCTAACTGCACCATGTCCCAATTCATGCAGTCCAGGATCTGTAGAAGAAGTTAGTTCCCGGACCATGACCATAAACAATGAAGCAAATAATGCAAGTCCATCTAACCGGATGGAAGAGAAAGCAGCCTTGCGGAAGCTCAAAATGCAGCTGAGCCTAGAAGACAAAGACGACTATGATGTTCACACCGAGGAAATTCCGTCAAATAATGAGCCTATTGTTATACGTGGGATTGAGAATGGGGAGCTAGGGAACTGTACAAATCTCGATGATATATTTACTGTACTGGACTTTAGTGAAAATCATACTAAAGAAGCTGGAACCTGCTCCGTTCCCTGTGCTATCGATGTGCTGAAAAGTTCAGAAGCTTGGTTGGAGGAGGATCAACTTGAAGCTATTCTGCATTCAGGTGCTATGACATTGACTGAAAGCCAATGGTTTCGTATTGACGAGGTTTCTCCAGAATGGGGGTTTCGTTCTGAAAGTACAAAGGTTATTATTATAGGAGATTTCCTTTGCAACCCATCCGACAGTGCAATGATGTTTGGTGATGTCAAGGTACCTGTGGAAACTGTTAAAAAAGGTGTCATCCGTTGCCATACTCCATGCCTTGATGCTGGAAAAGTGAGAATGTACATGATTGATGTGAATGGCAAACCCTGCAGTGAAGAACGAGAATTTGAATTCCTTGAGAAGCCTACCAGCATGGTTGATGGAAGAAAACCTTGGAATGAAGAACAAGATTTTATCGATCAAAAACCTACTAAAAGTAACAAGGAGCTGCTGCTGCTGCTCAACTATATGCAGATGCTTTTTGATGGTCATGGTTATGAATTGTTTTCAAAATTCAGTTTGCCACTCTCAAATCTTGACTGTGGATTCCAAGTTAACCAAATTGATATTGTGAAGAAAACAAATGAGCTGCTGGACCACGAGATCTCAGTAAATCACGTCATGGAAGTACTGCTTAACGACAAATTTGAGCATTGGCTTTCATCCAAAGTTGAACAGAGTAGTGATGGAACACATTTGCTTCCTAAACAATACCACAGTGTTATACATACCGTTGCAGCTTTGGGATACGAATGGGCTTTGAAGCCATTGCTTAGTTCTGGGGTACCTATAAACTACCGCGATGCAAATGGATGGACTGCTCTACATTGGGCTGCACGATTTGGCAGGGAACGGATGGTGGCTGCTCTTGTTGCTTCTGGTGCTGCAGCTGGTGCACTTTCACATCCTACATCGGAAGACCCTGCAGCCAATACACCTGCTTCAATAGCTTCTGCATATGGTTTCAGTGGCCTTTCTGCATTCCTTTCAGAAGCACAATTAATATCTCACCTTGACTCTCTAGAATCAAAAGAAAATGCTAAGTGTGAAGTTGGTGCCAGTGGAGGTGGAATACTTTGTGCCACGGACAGAATATGGGACAAAGGCCCCCATGTGTCGGGTGGAACTGGTGATCAGCTTGCTCTTCAGGATTCCTTAGGAGGTATCCGAAATGCTGTTCAAGCTGCATCGCGGATACAAGCCGCCTTTCGAGTGTTCTCCTTCAGGAAAAAGCAAGAGACTGCTCTTCAGAATACAAATAGCTGTGACACAGATACAGTGTCACAAGGTATACTTGAGAAAGCAGCATTATCTATTCAGAAGAATTTCAGGTGCTGGAAGAAACGTAGAGAATTCCTGAAAGTGCGGAAAAATATCATCAGGATACAGGCACGGGTGAGAGCTCATCAAGAAAGAAACAAGTACAAGGAATTACTGAAGAGTGTTGGTGTCCTTGAGAAGGTGATGCTACGATGGTACAGAAAAGGTGTTGGTTTGCGAGGATTCAATTCCGGGGTGATGCCAATGGATGAAGACGTGGAAGATGTTGTCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTATTAATGAAGCTGTTTCGAGGGTATCATCTATCATAGATAATCCTTTTGCAAGACAGCAGTACCGACGGATGCTCGAAATGTACCAACAAGCAAAGAAGTACAATAATATGGCAGTAAATCAGGTGTAA
Protein Sequence:
  • >Oropetium_20150105_09812A|Oropetium_thomaeum|CAMTA|Oropetium_20150105_09812A
    MQQQGFDVHKLEQEVKTRWLRPKEVLQILQNHEWFTIAHKPAHKPPSGSWFLYNRRVLRFFRNDGYTWQKKRNGKSSNEAHERLKVDNIEALNCYYARGDQNPTFQRRIYWMLDPAYDHIVLVHYRDVQEGSISVSARNDSSTSNQNGSASRAEVHGSPGWTSELTAPCPNSCSPGSVEEVSSRTMTINNEANNASPSNRMEEKAALRKLKMQLSLEDKDDYDVHTEEIPSNNEPIVIRGIENGELGNCTNLDDIFTVLDFSENHTKEAGTCSVPCAIDVLKSSEAWLEEDQLEAILHSGAMTLTESQWFRIDEVSPEWGFRSESTKVIIIGDFLCNPSDSAMMFGDVKVPVETVKKGVIRCHTPCLDAGKVRMYMIDVNGKPCSEEREFEFLEKPTSMVDGRKPWNEEQDFIDQKPTKSNKELLLLLNYMQMLFDGHGYELFSKFSLPLSNLDCGFQVNQIDIVKKTNELLDHEISVNHVMEVLLNDKFEHWLSSKVEQSSDGTHLLPKQYHSVIHTVAALGYEWALKPLLSSGVPINYRDANGWTALHWAARFGRERMVAALVASGAAAGALSHPTSEDPAANTPASIASAYGFSGLSAFLSEAQLISHLDSLESKENAKCEVGASGGGILCATDRIWDKGPHVSGGTGDQLALQDSLGGIRNAVQAASRIQAAFRVFSFRKKQETALQNTNSCDTDTVSQGILEKAALSIQKNFRCWKKRREFLKVRKNIIRIQARVRAHQERNKYKELLKSVGVLEKVMLRWYRKGVGLRGFNSGVMPMDEDVEDVVKVFRKQRVETAINEAVSRVSSIIDNPFARQQYRRMLEMYQQAKKYNNMAVNQV*