Gene Details:

  • Gene ID: orange1.1g001365m
  • Gene Name: CISIN_1g001365mg
  • Gene Family: CAMTA Family
  • Description: CAMTA Family protein
  • Species: Citrus sinensis
  • Source: CAMTA family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_006428204.1  — calmodulin-binding transcription activator 3
  • Swissprot:  Q8GSA7  — CMTA3_ARATH; Calmodulin-binding transcription activator 3
  • TrEMBL:  A0A067F009  — A0A067F009_CITSI; Uncharacterized protein
  • STRING:  XP_006428204.1  — (Citrus clementina)

Gene Ontology:

  • GO:0009409  — Biological Process — response to cold
  • GO:0010150  — Biological Process — leaf senescence
  • GO:0042742  — Biological Process — defense response to bacterium
  • GO:0050832  — Biological Process — defense response to fungus
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0005516  — Molecular Function — calmodulin binding

Family Introduction:

  • The CAMTA family of calmodulin binding transcription factors comprises six members in Arabidopsis (Bouche et al., 2002; Finkler et al., 2007). Each protein includes an IQ domain for calmodulin binding; ankyrin repeats for protein interactions; the TIG domain, which has nonspecific DNA binding activity; and the CG-1 domain, which has specific DNA binding activity. The CG-1 domain recognizes the core consensus sequence, vCGCGb, referred to as the CG-1 element (da Costa e Silva, 1994). This sequence matches the CM2 sequence, CCGCGT, and overlaps the ICEr1 element. Thus, the possibility was raised that one or more of the CAMTA proteins might have a role in regulating CBF2 expression.

Literature:

Sequences:

CDS Sequence:
  • >orange1.1g001365m|Citrus_sinensis|CAMTA|orange1.1g001365m
    ATGGCAGACTCTAGACGCTTTGCTCTTGGTAACCAATTAGATATAGAGCAAATATTGATAGAAGCGCAACATAGATGGCTACGTCCTGCTGAAATTTGTGAAATTTTGAGGAATTATACTAAATTCCGAATTGCCCCTGAGTCTCCTCATACCCCCCCAAGTGGTTCGCTTTTTCTTTTTGATCGGAAGGTGCTGAGGTACTTTAGAAAAGATGGTCATAATTGGAGAAAGAAGAAAGATGGGAAAACAGTCAAAGAAGCTCATGAGAGGCTCAAGGCTGGGAGTGTTGATGTGTTGCATTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAAAGGCGCAGTTATTGGATGCTTGAAGAGGAACTCTCACACATAGTTCTTGTCCACTACCGAGAAGTAAAGGGAAATCGGACAAACTTTAATCGTGCTAAAGTGGCTGAAGGAGCTACTCCATATTCCCAAGAAAATGAAGAAACCATACCCAATTCTGAGGTAGAAGGTTCTCAGTCTTCTGGTTTTCATCCTAACAGTTACCAAATGCCTTCACAAACTGCAGATACAAGTCTAAACAGTGCTCAGGCATCTGAGTATGAGGATGCTGAATCAGTGTATAATAACCAAGCCAGTTCCAGATTCCACTCTTTTCTTGATCTTCAGCAGCCTGTGGCAGAGAAGATAGATGCAGGACTTGCTGATCCTTATTATCCGTCATCACTTACAAATAATTATCAAGGAAAGTTCTCAGTTGTTCCCGGGGCTGATTTTATTTCACCCGCTCAAACAGATAAAAGTAGGAATTCTAATGATACTGGATTGACATATGAGCCCCAAAAAAACCTTGATTTCCCGTCATGGGAGGATGTCTTGCAAAATTGTTCGCAAGGAGTTGGATCTCAGCCTGAAGCTCTGGGAGACATTCCTAACCAAGGGTACGACATTCTGGGAGAGCCTTTTACCAACAGTTTTGGTGAACGGAAGGAGTTTGGGAGTCATCTACAGACCCGAGGGGAGTGGCAGGCATCTCGAAATGATTCTTCACATTTATCCAATTGGCCAATGGATCAGAAGGTCTATTTAGACTCTGCACATGATCTTACTTCTCAGTCTTGTGAACAAGGAGCGGCTCATGATGGTTTACTTGATTCACTTCGGCCTCCCCATGCACATCCCAATATGGAAAATGATGTTCATGAACAGCTTCCAAATGCAGAACATGGACATCTTCTGAAATCAGATCCAGAAAGCAGTTTGACTATAGATGGGAAATCCTTTTACTCCTCTGCTATAAAGCAGCATTTAATTGATGGTTCTACAGAAGGTCTGAAGAAGCTTGACAGTTTCAACCGCTGGATGAGTAAAGAACTAGGAGATGTAAAAGAGTCGAATATGCAATCCAGTTCCGGAGCCTATTGGGAGACAGTTGAAAGTGAAAATGGTGTTGATGATTCTGGCGTCTCCCCTCAAGCACGCTTGGATACCTATATGATGAGTCCTTCCCTCTCCCAAGACCAGCTGTATAGCATTATTGATTTCTCACCAAACTGGGCTTATGTGAGCTCAGAAGTCAAGGTCCTGATCACGGGACGTTTCTTGATGAGTCAGCAAGAGGCAGAAAATTGTAAGTGGTCATGTATGTTTGGGGAAATTGAAGTTCCAGCAGAAATTGTGGCAGGTGGTGTTCTTCGTTGTCATACTTCTTCACAAAAGGTTGGGAGAGTTCCATTTTACGTTACATGTTCCAATAGGTTGTCATGTAGCGAAGTGCGAGAGTTTGAATATCGAGCCAGCCATATCCCAGATGTGGATGTTGCAGATAATTGTGGTGACATCACAAGTGAAAATCTCCGTATGCAATTTGGAAAGTTATTGTGTCTGACTTCTGTCAGTACTCCTAATTATGATCCCAGCAATCTGAGCGATATATCTCAACTGAACAGTAAAATCAGTTCACTGCTAAAAGATGAAAATGATGATTGGGACCTGATGTTAAAACTAACTGCAGAGGAGAAATTTTCATCAGAAGAGGTAAAAGAGAAGCTTGTGCAAAAGCTACTAAAGGAGAAGTTGCAAGTATGGCTTGTGCAGAAGGCAGCTGAAGGTGGAAAAGGCCCTTGTGTGTTAGATCATTGTGGCCAAGGAGTGCTACATTTTGCAGCTGCTCTTGGCTATGATTGGGCCCTAGAACCCACAACTGTTGCTGGTGTAAATATCAATTTCCGCGATGTAAATGGATGGACTGCACTTCATTGGGCAGCATATTGTGGCAGAGAGCGCACAGTTGCTTCCCTTATTGCTCTTGGTGCTGCTCCTGGAGCTCTATCTGATCCAACTCCCAAATATCCTTCAGGCCGAACACCTGCCGATCTGGCTTCTTCCATTGGACACAAAGGAATTGCTGGTTATCTTGCTGAATCAGATTTGAGTTCCGCACTCTCCGCTATTAGTTTAAATAAAAAGGATGGTGATGTAGCTGAAGTTACTGGAGCAACAGCAGTTCAGACAGTTCCTCAACGATGTCCTACTCCTGTCAGTGATGGGGATCTTCCATATGGATTGTCAATGAAGGACTCATTAGCTGCTGTCCGCAATGCTACACAAGCAGCTGCTCGTATTCATCAAGTGTTCCGGGTACAGTCCTTCCAGAAAAAGCAGTTGAAAGAATATGGTAATGATACATTTGGTATATCAGATGAGCGTGCTCTTTCACTTGTTGCAGTCAAGACCCAGAAGCCAGGTCATCACGATGAGCCTGTGCATGCTGCTGCAACACGAATACAAAATAAGTTCCGTAGTTGGAAGGGTAGGAAAGATTTCTTGATAATCCGGAAGCAAATCATCAAAATTCAGGCGTATGTAAGAGGCCACCAGGTCAGGAAAAACTATAAGAAGATAATATGGTCTGTAGGAATTATGGAGAAGATTATCTTGCGCTGGAGAAGAAGAGGAAGTGGTTTGCGTGGATTTAAGTCGGAGACGCTTACTGCAAGTTCCAGCATGGTAGCCACATCCGCAAAGGAGGATGACTATGATTTCCTAAAAGAAGGCAGAAAGCAAAAAGAAGAAAGGTTACAGAAGGCCCTTGCCAGAGTGAAGTCCATGGTTCAGTATCCAGAAGCGAGGGATCAATATCGTAGACTGCTGAATGTTGTGAATGAGATCCAGGAGACAAAGGCCATGGCTCTGAGCAACGCAGAAGAAACAGCTGATTTTGATGATGACTTGGTAGATATTGAAGCACTATTGGATGACACTCTCATGCCTAATGCTTCTTGA
Protein Sequence:
  • >orange1.1g001365m|Citrus_sinensis|CAMTA|orange1.1g001365m
    MADSRRFALGNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEGSQSSGFHPNSYQMPSQTADTSLNSAQASEYEDAESVYNNQASSRFHSFLDLQQPVAEKIDAGLADPYYPSSLTNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFTNSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQLPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDGSTEGLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVESENGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAVQTVPQRCPTPVSDGDLPYGLSMKDSLAAVRNATQAAARIHQVFRVQSFQKKQLKEYGNDTFGISDERALSLVAVKTQKPGHHDEPVHAAATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYKKIIWSVGIMEKIILRWRRRGSGLRGFKSETLTASSSMVATSAKEDDYDFLKEGRKQKEERLQKALARVKSMVQYPEARDQYRRLLNVVNEIQETKAMALSNAEETADFDDDLVDIEALLDDTLMPNAS*