Gene Details:

  • Gene ID: GSBRNA2T00090682001
  • Gene Name: GSBRNA2T00090682001
  • Gene Family: CAMTA Family
  • Description: CAMTA Family protein
  • Species: Brassica napus
  • Source: CAMTA family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_022545873.1  — probable serine/threonine-protein kinase vps15
  • Swissprot:  Q9M0E5  — VPS15_ARATH; Serine/threonine-protein kinase VPS15
  • TrEMBL:  A0A078FUZ2  — A0A078FUZ2_BRANA; BnaA09g29570D protein
  • STRING:  Bra024655.1-P  — (Brassica rapa)

Gene Ontology:

  • GO:0006468  — Biological Process — protein phosphorylation
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0004672  — Molecular Function — protein kinase activity
  • GO:0005524  — Molecular Function — ATP binding

Family Introduction:

  • The CAMTA family of calmodulin binding transcription factors comprises six members in Arabidopsis (Bouche et al., 2002; Finkler et al., 2007). Each protein includes an IQ domain for calmodulin binding; ankyrin repeats for protein interactions; the TIG domain, which has nonspecific DNA binding activity; and the CG-1 domain, which has specific DNA binding activity. The CG-1 domain recognizes the core consensus sequence, vCGCGb, referred to as the CG-1 element (da Costa e Silva, 1994). This sequence matches the CM2 sequence, CCGCGT, and overlaps the ICEr1 element. Thus, the possibility was raised that one or more of the CAMTA proteins might have a role in regulating CBF2 expression.

Literature:

Sequences:

CDS Sequence:
  • >GSBRNA2T00090682001|Brassica_napus|CAMTA|GSBRNA2T00090682001
    ATGTTAACATGGTCTCTAGTCTTTTCTTTAAGATGCCTTTCCAGCAAAATCTTTTACAGATATTTCCACATTATCTCGGGGTCTCCCTGTTTCAACCTCTCCGGGATGTTTTCCGGAGAGTATGAAATGTTTCCGGAGAGGTTGAAACAGGGAGATTTCCGCATCACTCTTTTGTTTGATAGGAAGGAGCTCAGATATTTTAGGAAAGATGGGCACAACCGGAGGAAGAAGAAAGATGGTAAAACGGTGAAAGAGGATCACGAAAAGCTCAAGTTACTTCTTGCTGTGAAGCAGTGCCATGAGAAGGGTATATGTCATGGTGATATCAAGTGCGAGAACGTCTTGGTCACTTCCTGGAACTGGCTTTACCTTGCTGATTTTGCGTCCTTCAAACCTACATACATTCCTTATGATGATCCTTCAGACTTTTCCTTCTTTCATGATACAAGGGAAAGAAGGCTTTCCCTTTGTCCATGGTACATTTCGGAAGTTGCCGTTACTGGAGTCAGATTAATGATCGAAGCGGAATACTCATGGGGTTGA
Protein Sequence:
  • >GSBRNA2T00090682001|Brassica_napus|CAMTA|GSBRNA2T00090682001
    MLTWSLVFSLRCLSSKIFYRYFHIISGSPCFNLSGMFSGEYEMFPERLKQGDFRITLLFDRKELRYFRKDGHNRRKKKDGKTVKEDHEKLKLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDDPSDFSFFHDTRERRLSLCPWYISEVAVTGVRLMIEAEYSWG*